RNA–Protein interactions for RNA: YJL099W

CHS6, Transcript of Member of the ChAPs (Chs5p-Arf1p-binding proteins) family, yeast

Gene CHS6, Length 2,241 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHS6	YJL099W	YPL245W	Q12179	454 aa	Known RBP	0.63	□□□□□ -2.31
CHS6	YJL099W	FRE8	Q12209	686 aa		0.63	□□□□□ -2.31
CHS6	YJL099W	AIM45	Q12480	344 aa	Known RBP	0.63	□□□□□ -2.31
CHS6	YJL099W	DET1	Q99288	334 aa	Known RBP	0.63	□□□□□ -2.31
CHS6	YJL099W	AUS1	Q08409	1394 aa		0.63	□□□□□ -2.31
CHS6	YJL099W	STF1	P01098	86 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	SAG1	P20840	650 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	PET18	P25362	215 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	SKG6	P32900	734 aa	Predicted RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	CSE1	P33307	960 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	SRB2	P34162	210 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	YKL187C	P34231	750 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	MYO3	P36006	1272 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	RCK2	P38623	610 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	MMS21	P38632	267 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	END3	P39013	349 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	UFE1	P41834	346 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	YFR018C	P43599	363 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	LOH1	P47055	219 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	EFM3	P47163	339 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	TAF6	P53040	516 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	PXR1	P53335	271 aa	Predicted RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	GMC1	Q04399	608 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	CSM3	Q04659	317 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	SPH1	Q06160	661 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	VIK1	Q12045	647 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	MCT1	Q12283	360 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	YDR262W	Q12331	272 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	TFC7	Q12415	435 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	PRM4	Q12498	284 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	IZH4	Q99393	312 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	CDC37	P06101	506 aa	Known RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	RPS16A	P0CX51	143 aa	Known RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	RPS16B	P0CX52	143 aa	Known RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	ERD1	P16151	362 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	FUS3	P16892	353 aa	Known RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	SAR1	P20606	190 aa	Known RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	IFM1	P25038	676 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.62	□□□□□ -2.31	not detected
CHS6	YJL099W	TPS2	P31688	896 aa	Known RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	PDC2	P32896	925 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	TIP20	P33891	701 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	PTK1	P36002	662 aa	Predicted RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	RFT1	P38206	574 aa	Predicted RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	IML3	P38265	245 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	YMR262W	P38430	313 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	TRR2	P38816	342 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	TDA11	P38854	504 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	ATG7	P38862	630 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	UTP25	P40498	721 aa	Known RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	BUD13	P46947	266 aa	Predicted RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	NAS6	P50086	228 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	YGR018C	P53211	109 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	YGR168C	P53293	376 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	SUR7	P54003	302 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	RMI1	Q02685	241 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	INP2	Q03824	705 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	CSI1	Q04368	295 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	YLR297W	Q05899	129 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	MRX9	Q07349	420 aa	Known RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	YOL029C	Q08187	201 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	RDL2	Q08742	149 aa	Known RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	SAM4	Q08985	325 aa	Known RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	RRP42	Q12277	265 aa	Predicted RBP	0.62	□□□□□ -2.31
CHS6	YJL099W	YPR1	Q12458	312 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	SFG1	Q12507	346 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	SPO24	Q3E752	67 aa		0.62	□□□□□ -2.31
CHS6	YJL099W	YPR096C	O13587	100 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	RAD1	P06777	1100 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	GCD2	P12754	651 aa	Predicted RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	GAL3	P13045	520 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	CUP2	P15315	225 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	UTR1	P21373	530 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	KRR1	P25586	316 aa	Predicted RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	PMT2	P31382	759 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	ZRT1	P32804	376 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.61	□□□□□ -2.31	not detected
CHS6	YJL099W	AST1	P35183	429 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	SMP1	P38128	452 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	TAE1	P38340	232 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	YHR035W	P38769	630 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	LIN1	P38852	340 aa	Predicted RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	SSO2	P39926	295 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	SLM1	P40485	686 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	PMT4	P46971	762 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	ASG7	P46993	209 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	COX16	P47081	118 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	KEL2	P50090	882 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	YGL118C	P53132	145 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	SWC4	P53201	476 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	HST4	P53688	370 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	ARP5	P53946	755 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	IRC4	Q03036	179 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	ARC18	Q05933	178 aa	Known RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	FAR10	Q06001	478 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	PIN3	Q06449	215 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	PGC1	Q08959	321 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	TAF10	Q12030	206 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	SLM3	Q12093	417 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	RTC5	Q12108	567 aa	Known RBP	0.61	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms