RNA–Protein interactions for RNA: YIL132C

CSM2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene CSM2, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM2	YIL132C	TIP20	P33891	701 aa		5.11	□□□□□ -1.59
CSM2	YIL132C	YFR018C	P43599	363 aa		5.11	□□□□□ -1.59
CSM2	YIL132C	YDR286C	Q05530	114 aa		5.11	□□□□□ -1.59
CSM2	YIL132C	ZIP1	P31111	875 aa		5.1	□□□□□ -1.59
CSM2	YIL132C	DBP7	P36120	742 aa	Known RBP	5.1	□□□□□ -1.59
CSM2	YIL132C	EFM1	P38732	585 aa		5.1	□□□□□ -1.59
CSM2	YIL132C	NRM1	P53718	249 aa		5.1	□□□□□ -1.59
CSM2	YIL132C	AUS1	Q08409	1394 aa		5.1	□□□□□ -1.59
CSM2	YIL132C	PGC1	Q08959	321 aa		5.1	□□□□□ -1.59
CSM2	YIL132C	OPI1	P21957	404 aa		5.09	□□□□□ -1.59
CSM2	YIL132C	RAD23	P32628	398 aa	Known RBP	5.09	□□□□□ -1.59
CSM2	YIL132C	LIN1	P38852	340 aa	Predicted RBP	5.09	□□□□□ -1.59
CSM2	YIL132C	HCH1	P53834	153 aa		5.09	□□□□□ -1.59
CSM2	YIL132C	FAR10	Q06001	478 aa		5.09	□□□□□ -1.59
CSM2	YIL132C	TAE1	P38340	232 aa		5.08	□□□□□ -1.6
CSM2	YIL132C	YDR262W	Q12331	272 aa		5.08	□□□□□ -1.6
CSM2	YIL132C	FMT1	P32785	401 aa		5.07	□□□□□ -1.6
CSM2	YIL132C	SHE4	P51534	789 aa		5.07	□□□□□ -1.6
CSM2	YIL132C	YDR018C	Q12185	396 aa		5.07	□□□□□ -1.6
CSM2	YIL132C	SAL1	D6W196	494 aa		5.06	□□□□□ -1.6
CSM2	YIL132C	RNR2	P09938	399 aa	Known RBP	5.06	□□□□□ -1.6
CSM2	YIL132C	TPS2	P31688	896 aa	Known RBP	5.06	□□□□□ -1.6
CSM2	YIL132C	TAF6	P53040	516 aa		5.06	□□□□□ -1.6
CSM2	YIL132C	MRX8	Q05473	314 aa		5.06	□□□□□ -1.6
CSM2	YIL132C	SPH1	Q06160	661 aa		5.06	□□□□□ -1.6
CSM2	YIL132C	SLF1	Q12034	447 aa	Known RBP	5.06	□□□□□ -1.6
CSM2	YIL132C	FUS3	P16892	353 aa	Known RBP	5.05	□□□□□ -1.6
CSM2	YIL132C	TPM1	P17536	199 aa	Known RBP	5.05	□□□□□ -1.6
CSM2	YIL132C	SMF2	P38778	549 aa		5.05	□□□□□ -1.6
CSM2	YIL132C	FRT2	P39734	528 aa		5.05	□□□□□ -1.6
CSM2	YIL132C	UFE1	P41834	346 aa		5.05	□□□□□ -1.6
CSM2	YIL132C	PXR1	P53335	271 aa	Predicted RBP	5.05	□□□□□ -1.6
CSM2	YIL132C	HST4	P53688	370 aa		5.05	□□□□□ -1.6
CSM2	YIL132C	MHP1	P43638	1398 aa		5.04	□□□□□ -1.6
CSM2	YIL132C	VPS63	O13549	108 aa		5.04	□□□□□ -1.6
CSM2	YIL132C	RBK1	P25332	333 aa		5.04	□□□□□ -1.6
CSM2	YIL132C	VMA5	P31412	392 aa	Known RBP	5.04	□□□□□ -1.6
CSM2	YIL132C	PFS2	P42841	465 aa	Known RBP	5.04	□□□□□ -1.6
CSM2	YIL132C	FLO11	P08640	1367 aa		5.04	□□□□□ -1.6
CSM2	YIL132C	REP1	P03871	373 aa		5.03	□□□□□ -1.6
CSM2	YIL132C	CTA1	P15202	515 aa		5.03	□□□□□ -1.6
CSM2	YIL132C	KTI12	P34253	313 aa	Known RBP	5.03	□□□□□ -1.6
CSM2	YIL132C	FRM2	P37261	193 aa		5.03	□□□□□ -1.6
CSM2	YIL132C	HIT1	P46973	164 aa		5.03	□□□□□ -1.6
CSM2	YIL132C	TPC1	P53257	314 aa		5.03	□□□□□ -1.6
CSM2	YIL132C	BUR2	Q05949	395 aa		5.03	□□□□□ -1.6
CSM2	YIL132C	PRM7	Q12459	698 aa		5.03	□□□□□ -1.6
CSM2	YIL132C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
CSM2	YIL132C	RVB1	Q03940	463 aa	Known RBP	5.02	□□□□□ -1.61
CSM2	YIL132C	APC4	Q04601	652 aa		5.02	□□□□□ -1.61
CSM2	YIL132C	GAL3	P13045	520 aa		5.01	□□□□□ -1.61
CSM2	YIL132C	VMA2	P16140	517 aa	Known RBP	5.01	□□□□□ -1.61
CSM2	YIL132C	CKA2	P19454	339 aa		5.01	□□□□□ -1.61
CSM2	YIL132C	CYM1	P32898	989 aa		5.01	□□□□□ -1.61
CSM2	YIL132C	TRR2	P38816	342 aa		5.01	□□□□□ -1.61
CSM2	YIL132C	UTP15	Q04305	513 aa	Known RBP	5.01	□□□□□ -1.61
CSM2	YIL132C	ITR2	P30606	609 aa		5	□□□□□ -1.61
CSM2	YIL132C	ACB1	P31787	87 aa		5	□□□□□ -1.61
CSM2	YIL132C	MEI5	P32489	222 aa		5	□□□□□ -1.61
CSM2	YIL132C	INP1	Q03694	420 aa		5	□□□□□ -1.61
CSM2	YIL132C	APC2	Q12440	853 aa		5	□□□□□ -1.61
CSM2	YIL132C	COX10	P21592	462 aa		4.99	□□□□□ -1.61
CSM2	YIL132C	SKG6	P32900	734 aa	Predicted RBP	4.99	□□□□□ -1.61
CSM2	YIL132C	PRY2	P36110	329 aa		4.99	□□□□□ -1.61
CSM2	YIL132C	YIR035C	P40579	254 aa		4.99	□□□□□ -1.61
CSM2	YIL132C	INP2	Q03824	705 aa		4.99	□□□□□ -1.61
CSM2	YIL132C	STE23	Q06010	1027 aa		4.99	□□□□□ -1.61
CSM2	YIL132C	MRX9	Q07349	420 aa	Known RBP	4.99	□□□□□ -1.61
CSM2	YIL132C	RDL2	Q08742	149 aa	Known RBP	4.99	□□□□□ -1.61
CSM2	YIL132C	PRM4	Q12498	284 aa		4.99	□□□□□ -1.61
CSM2	YIL132C	SPS100	P13130	326 aa		4.98	□□□□□ -1.61
CSM2	YIL132C	TRX1	P22217	103 aa	Known RBP	4.98	□□□□□ -1.61
CSM2	YIL132C	SRB2	P34162	210 aa		4.98	□□□□□ -1.61
CSM2	YIL132C	RPL18A	P0CX49	186 aa	Known RBP	4.97	□□□□□ -1.61
CSM2	YIL132C	RPL18B	P0CX50	186 aa	Known RBP	4.97	□□□□□ -1.61
CSM2	YIL132C	RFT1	P38206	574 aa	Predicted RBP	4.97	□□□□□ -1.61
CSM2	YIL132C	RRG9	P40156	214 aa		4.97	□□□□□ -1.61
CSM2	YIL132C	YGR168C	P53293	376 aa		4.97	□□□□□ -1.61
CSM2	YIL132C	YMR244W	Q04018	355 aa		4.97	□□□□□ -1.61
CSM2	YIL132C	DTD1	Q07648	150 aa	Known RBP	4.97	□□□□□ -1.61
CSM2	YIL132C	YKL187C	P34231	750 aa		4.96	□□□□□ -1.62
CSM2	YIL132C	RCK1	P38622	512 aa		4.96	□□□□□ -1.62
CSM2	YIL132C	BDH1	P39714	382 aa		4.96	□□□□□ -1.62
CSM2	YIL132C	PMT4	P46971	762 aa		4.96	□□□□□ -1.62
CSM2	YIL132C	FMP48	P53233	369 aa		4.96	□□□□□ -1.62
CSM2	YIL132C	YDL211C	Q12121	372 aa		4.96	□□□□□ -1.62
CSM2	YIL132C	SDS23	P53172	527 aa		4.95	□□□□□ -1.62
CSM2	YIL132C	YPR195C	Q06594	109 aa		4.95	□□□□□ -1.62
CSM2	YIL132C	YLR012C	Q07927	99 aa		4.95	□□□□□ -1.62
CSM2	YIL132C	BUD2	P33314	1104 aa		4.94	□□□□□ -1.62
CSM2	YIL132C	ZRT3	P34240	503 aa		4.94	□□□□□ -1.62
CSM2	YIL132C	ZRG17	P53735	605 aa		4.94	□□□□□ -1.62
CSM2	YIL132C	GMC1	Q04399	608 aa		4.94	□□□□□ -1.62
CSM2	YIL132C	ECM19	Q06011	112 aa		4.94	□□□□□ -1.62
CSM2	YIL132C	DFM1	Q12743	341 aa	Known RBP	4.94	□□□□□ -1.62
CSM2	YIL132C	CDC37	P06101	506 aa	Known RBP	4.93	□□□□□ -1.62
CSM2	YIL132C	MIC19	P43594	170 aa		4.93	□□□□□ -1.62
CSM2	YIL132C	MGR3	Q04472	501 aa		4.93	□□□□□ -1.62
CSM2	YIL132C	MIM1	Q08176	113 aa		4.93	□□□□□ -1.62
CSM2	YIL132C	YPS1	P32329	569 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms