RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W VBA4Q04602 768 aaKnown RBP9.08□□□□□ -0.96
UBA4YHR111W VIK1Q12045 647 aa9.08□□□□□ -0.96
UBA4YHR111W YOR343CQ12484 108 aa9.08□□□□□ -0.96
UBA4YHR111W PEP4P07267 405 aaKnown RBP9.07□□□□□ -0.96
UBA4YHR111W RPB8P20436 146 aa9.07□□□□□ -0.96
UBA4YHR111W RRP7P25368 297 aaPredicted RBP9.07□□□□□ -0.96
UBA4YHR111W YKL077WP36081 392 aa9.07□□□□□ -0.96
UBA4YHR111W CHK1P38147 527 aa9.07□□□□□ -0.96
UBA4YHR111W CTF8P38877 133 aa9.07□□□□□ -0.96
UBA4YHR111W YJR098CP47139 656 aa9.07□□□□□ -0.96
UBA4YHR111W MON1P53129 644 aa9.07□□□□□ -0.96
UBA4YHR111W PRM8P53174 237 aa9.07□□□□□ -0.96
UBA4YHR111W FOL3Q12676 427 aaPredicted RBP9.07□□□□□ -0.96
UBA4YHR111W RPC40P07703 335 aaKnown RBP9.06□□□□□ -0.96
UBA4YHR111W SNF4P12904 322 aa9.06□□□□□ -0.96
UBA4YHR111W PRP28P23394 588 aa9.06□□□□□ -0.96
UBA4YHR111W UBC8P28263 218 aa9.06□□□□□ -0.96
UBA4YHR111W MDJ1P35191 511 aa9.06□□□□□ -0.96
UBA4YHR111W MAE1P36013 669 aaKnown RBP9.06□□□□□ -0.96
UBA4YHR111W COS9P36034 407 aa9.06□□□□□ -0.96
UBA4YHR111W YKL071WP36086 256 aa9.06□□□□□ -0.96
UBA4YHR111W MRPL39P36533 70 aa9.06□□□□□ -0.96
UBA4YHR111W RPP1P38786 293 aa9.06□□□□□ -0.96
UBA4YHR111W FAR7P43592 221 aa9.06□□□□□ -0.96
UBA4YHR111W MKC7P53379 596 aa9.06□□□□□ -0.96
UBA4YHR111W YMR265CQ03508 461 aaKnown RBP9.06□□□□□ -0.96
UBA4YHR111W DML1Q03652 475 aa9.06□□□□□ -0.96
UBA4YHR111W YDR239CQ03780 787 aa9.06□□□□□ -0.96
UBA4YHR111W SNT309Q06091 175 aaPredicted RBP9.06□□□□□ -0.96
UBA4YHR111W YLR126CQ12288 251 aa9.06□□□□□ -0.96
UBA4YHR111W HEM4P06174 275 aa9.05□□□□□ -0.96
UBA4YHR111W RHO1P06780 209 aaKnown RBP9.05□□□□□ -0.96
UBA4YHR111W MET2P08465 486 aa9.05□□□□□ -0.96
UBA4YHR111W HAP4P14064 554 aa9.05□□□□□ -0.96
UBA4YHR111W MSN4P33749 630 aa9.05□□□□□ -0.96
UBA4YHR111W FET3P38993 636 aa9.05□□□□□ -0.96
UBA4YHR111W NAB3P38996 802 aaKnown RBP RIP-Chip data9.05□□□□□ -0.96not detected
UBA4YHR111W KRE29P40026 464 aa9.05□□□□□ -0.96
UBA4YHR111W SPO73P40031 143 aa9.05□□□□□ -0.96
UBA4YHR111W IRC7P43623 340 aa9.05□□□□□ -0.96
UBA4YHR111W MRPL1Q04599 285 aa9.05□□□□□ -0.96
UBA4YHR111W SNO4Q04902 237 aa9.05□□□□□ -0.96
UBA4YHR111W COQ11Q05892 277 aa9.05□□□□□ -0.96
UBA4YHR111W YPR147CQ06522 304 aaKnown RBP9.05□□□□□ -0.96
UBA4YHR111W RAF1Q06891 181 aa9.05□□□□□ -0.96
UBA4YHR111W DTD1Q07648 150 aaKnown RBP9.05□□□□□ -0.96
UBA4YHR111W HSP33Q08914 237 aaKnown RBP9.05□□□□□ -0.96
UBA4YHR111W HSP32Q08992 237 aa9.05□□□□□ -0.96
UBA4YHR111W SPC3Q12133 184 aa9.05□□□□□ -0.96
UBA4YHR111W SET6Q12529 373 aa9.05□□□□□ -0.96
UBA4YHR111W SEC16P48415 2195 aaKnown RBP9.05□□□□□ -0.96
UBA4YHR111W YAK1P14680 807 aa9.05□□□□□ -0.96
UBA4YHR111W PRE2P30656 287 aaKnown RBP9.05□□□□□ -0.96
UBA4YHR111W MRPL6P32904 214 aa9.05□□□□□ -0.96
UBA4YHR111W SIC1P38634 284 aa9.05□□□□□ -0.96
UBA4YHR111W YAR028WP39548 234 aa9.05□□□□□ -0.96
UBA4YHR111W SEN34P39707 275 aa9.05□□□□□ -0.96
UBA4YHR111W GDI1P39958 451 aaKnown RBP9.05□□□□□ -0.96
UBA4YHR111W IDS2P46958 469 aa9.05□□□□□ -0.96
UBA4YHR111W FMP33P46998 180 aa9.05□□□□□ -0.96
UBA4YHR111W ASI2P53895 289 aa9.05□□□□□ -0.96
UBA4YHR111W NIP7Q08962 181 aaKnown RBP9.05□□□□□ -0.96
UBA4YHR111W YDL180WQ12301 547 aa9.05□□□□□ -0.96
UBA4YHR111W RPI1P23250 407 aaKnown RBP9.04□□□□□ -0.96
UBA4YHR111W PTP2P29461 750 aa9.04□□□□□ -0.96
UBA4YHR111W NIC96P34077 839 aa9.04□□□□□ -0.96
UBA4YHR111W MTC6P38849 526 aa9.04□□□□□ -0.96
UBA4YHR111W THO1P40040 218 aaKnown RBP9.04□□□□□ -0.96
UBA4YHR111W PRE6P40303 254 aaKnown RBP9.04□□□□□ -0.96
UBA4YHR111W ADO1P47143 340 aaKnown RBP9.04□□□□□ -0.96
UBA4YHR111W ERP6P53198 216 aa9.04□□□□□ -0.96
UBA4YHR111W COS1P53822 381 aa9.04□□□□□ -0.96
UBA4YHR111W ASI1P54074 624 aa9.04□□□□□ -0.96
UBA4YHR111W KAP120Q02932 1032 aa9.04□□□□□ -0.96
UBA4YHR111W TFB3Q03290 321 aa9.04□□□□□ -0.96
UBA4YHR111W YMR226CQ05016 267 aaKnown RBP9.04□□□□□ -0.96
UBA4YHR111W YDL176WQ12027 708 aa9.04□□□□□ -0.96
UBA4YHR111W DPM1P14020 267 aaKnown RBP9.03□□□□□ -0.96
UBA4YHR111W TFS1P14306 219 aa9.03□□□□□ -0.96
UBA4YHR111W FBA1P14540 359 aaKnown RBP9.03□□□□□ -0.96
UBA4YHR111W SNF6P18888 332 aa9.03□□□□□ -0.96
UBA4YHR111W BUD5P25300 642 aaPredicted RBP9.03□□□□□ -0.96
UBA4YHR111W CYS4P32582 507 aaKnown RBP9.03□□□□□ -0.96
UBA4YHR111W SOF1P33750 489 aaKnown RBP9.03□□□□□ -0.96
UBA4YHR111W CHA4P43634 648 aa9.03□□□□□ -0.96
UBA4YHR111W MDE1P47095 244 aa9.03□□□□□ -0.96
UBA4YHR111W HMS2P47175 358 aa9.03□□□□□ -0.96
UBA4YHR111W BRR6P53062 197 aa9.03□□□□□ -0.96
UBA4YHR111W ABZ2Q03266 374 aa9.03□□□□□ -0.96
UBA4YHR111W HRT1Q08273 121 aa9.03□□□□□ -0.96
UBA4YHR111W DBP10Q12389 995 aaKnown RBP9.03□□□□□ -0.96
UBA4YHR111W YDL007C-AQ2V2Q0 85 aa9.03□□□□□ -0.96
UBA4YHR111W MHF1Q3E835 90 aa9.03□□□□□ -0.96
UBA4YHR111W SPS100P13130 326 aa9.02□□□□□ -0.97
UBA4YHR111W THI4P32318 326 aa9.02□□□□□ -0.97
UBA4YHR111W MCM10P32354 571 aa9.02□□□□□ -0.97
UBA4YHR111W PRP19P32523 503 aaKnown RBP9.02□□□□□ -0.97
UBA4YHR111W AST1P35183 429 aa9.02□□□□□ -0.97
UBA4YHR111W AIM3P38266 947 aaKnown RBP9.02□□□□□ -0.97
UBA4YHR111W GPP1P41277 250 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms