RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeastyeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTM1YHR109W INP2Q03824 705 aa3.17□□□□□ -1.9
CTM1YHR109W PRM6Q04705 352 aa3.17□□□□□ -1.9
CTM1YHR109W YDL109CQ12103 647 aa3.17□□□□□ -1.9
CTM1YHR109W POM33Q12164 279 aa3.17□□□□□ -1.9
CTM1YHR109W YGK3Q12222 375 aaPredicted RBP3.17□□□□□ -1.9
CTM1YHR109W YDL199CQ12407 687 aa3.17□□□□□ -1.9
CTM1YHR109W GCG1P32656 232 aaKnown RBP3.16□□□□□ -1.9
CTM1YHR109W RCK2P38623 610 aa3.16□□□□□ -1.9
CTM1YHR109W BIG1P38813 335 aa3.16□□□□□ -1.9
CTM1YHR109W COA1P40452 197 aa3.16□□□□□ -1.9
CTM1YHR109W MAM33P40513 266 aa3.16□□□□□ -1.9
CTM1YHR109W REX2P54964 269 aaKnown RBP3.16□□□□□ -1.9
CTM1YHR109W RTN1Q04947 295 aaKnown RBP3.16□□□□□ -1.9
CTM1YHR109W ESA1Q08649 445 aa3.16□□□□□ -1.9
CTM1YHR109W GIS3Q12418 502 aa3.16□□□□□ -1.9
CTM1YHR109W REP1P03871 373 aa3.15□□□□□ -1.9
CTM1YHR109W PMT2P31382 759 aa3.15□□□□□ -1.9
CTM1YHR109W SUA5P32579 426 aa3.15□□□□□ -1.9
CTM1YHR109W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.15□□□□□ -1.9not detected
CTM1YHR109W PEX22P39718 180 aa3.15□□□□□ -1.9
CTM1YHR109W SHQ1P40486 507 aaPredicted RBP3.15□□□□□ -1.9
CTM1YHR109W IDP2P41939 412 aa3.15□□□□□ -1.9
CTM1YHR109W EGT2P42835 1041 aa3.15□□□□□ -1.9
CTM1YHR109W KAP114P53067 1004 aa3.15□□□□□ -1.9
CTM1YHR109W MNT4P53745 580 aa3.15□□□□□ -1.9
CTM1YHR109W CWC25P53854 179 aaKnown RBP3.15□□□□□ -1.9
CTM1YHR109W MTQ1P53944 314 aa3.15□□□□□ -1.9
CTM1YHR109W YHC1Q05900 231 aaKnown RBP3.15□□□□□ -1.9
CTM1YHR109W GMC2Q06201 188 aa3.15□□□□□ -1.9
CTM1YHR109W ATG31Q12421 196 aa3.15□□□□□ -1.9
CTM1YHR109W YER078W-AQ3E7A2 54 aa3.15□□□□□ -1.9
CTM1YHR109W HEM4P06174 275 aa3.15□□□□□ -1.91
CTM1YHR109W RAD3P06839 778 aa3.15□□□□□ -1.91
CTM1YHR109W RPL31AP0C2H8 113 aaKnown RBP3.15□□□□□ -1.91
CTM1YHR109W RPS18AP0CX55 146 aaKnown RBP3.15□□□□□ -1.91
CTM1YHR109W RPS18BP0CX56 146 aaPredicted RBP3.15□□□□□ -1.91
CTM1YHR109W PRR1P28708 518 aa3.15□□□□□ -1.91
CTM1YHR109W FUN26P31381 517 aa3.15□□□□□ -1.91
CTM1YHR109W CSE2P33308 149 aa3.15□□□□□ -1.91
CTM1YHR109W YKT6P36015 200 aaKnown RBP3.15□□□□□ -1.91
CTM1YHR109W YPC1P38298 316 aa3.15□□□□□ -1.91
CTM1YHR109W YHR035WP38769 630 aa3.15□□□□□ -1.91
CTM1YHR109W RTR1P40084 226 aaPredicted RBP3.15□□□□□ -1.91
CTM1YHR109W YMR010WQ03687 405 aa3.15□□□□□ -1.91
CTM1YHR109W SNX41Q04053 625 aa3.15□□□□□ -1.91
CTM1YHR109W MFG1Q07684 458 aa3.15□□□□□ -1.91
CTM1YHR109W TAD3Q9URQ3 322 aa3.15□□□□□ -1.91
CTM1YHR109W ATP6P00854 259 aa3.14□□□□□ -1.91
CTM1YHR109W PET123P17558 318 aa3.14□□□□□ -1.91
CTM1YHR109W VPS1P21576 704 aaKnown RBP3.14□□□□□ -1.91
CTM1YHR109W YCR016WP25617 290 aaKnown RBP3.14□□□□□ -1.91
CTM1YHR109W CPR3P25719 182 aa3.14□□□□□ -1.91
CTM1YHR109W YKL063CP35725 167 aa3.14□□□□□ -1.91
CTM1YHR109W YER085CP40058 173 aa3.14□□□□□ -1.91
CTM1YHR109W YAR1P46683 200 aa3.14□□□□□ -1.91
CTM1YHR109W MST27P53176 234 aa3.14□□□□□ -1.91
CTM1YHR109W SHY1P53266 389 aa3.14□□□□□ -1.91
CTM1YHR109W OST6Q03723 332 aa3.14□□□□□ -1.91
CTM1YHR109W RIF2Q06208 395 aa3.14□□□□□ -1.91
CTM1YHR109W TAF10Q12030 206 aa3.14□□□□□ -1.91
CTM1YHR109W MSI1P13712 422 aa3.13□□□□□ -1.91
CTM1YHR109W ERD1P16151 362 aa3.13□□□□□ -1.91
CTM1YHR109W MET16P18408 261 aaPredicted RBP3.13□□□□□ -1.91
CTM1YHR109W TCD1P38756 429 aa3.13□□□□□ -1.91
CTM1YHR109W TDA11P38854 504 aa3.13□□□□□ -1.91
CTM1YHR109W CRZ1P53968 678 aa3.13□□□□□ -1.91
CTM1YHR109W SUR7P54003 302 aa3.13□□□□□ -1.91
CTM1YHR109W CDC14Q00684 551 aa3.13□□□□□ -1.91
CTM1YHR109W SRL4Q03085 281 aa3.13□□□□□ -1.91
CTM1YHR109W MYO5Q04439 1219 aaKnown RBP3.13□□□□□ -1.91
CTM1YHR109W YDL114WQ07530 308 aa3.13□□□□□ -1.91
CTM1YHR109W RDL2Q08742 149 aaKnown RBP3.13□□□□□ -1.91
CTM1YHR109W UTP23Q12339 254 aaKnown RBP3.13□□□□□ -1.91
CTM1YHR109W YBL111CQ3E7Y5 667 aa3.13□□□□□ -1.91
CTM1YHR109W IZH4Q99393 312 aa3.13□□□□□ -1.91
CTM1YHR109W ILV1P00927 576 aaKnown RBP3.12□□□□□ -1.91
CTM1YHR109W RPL16BP26785 198 aaKnown RBP3.12□□□□□ -1.91
CTM1YHR109W BMH2P34730 273 aaKnown RBP3.12□□□□□ -1.91
CTM1YHR109W YKL071WP36086 256 aa3.12□□□□□ -1.91
CTM1YHR109W GDS1P41913 522 aa3.12□□□□□ -1.91
CTM1YHR109W BNS1P50084 137 aa3.12□□□□□ -1.91
CTM1YHR109W CRH1P53301 507 aa3.12□□□□□ -1.91
CTM1YHR109W CPD1P53314 239 aa3.12□□□□□ -1.91
CTM1YHR109W YPL077CQ02831 240 aa3.12□□□□□ -1.91
CTM1YHR109W PBA1Q05778 276 aa3.12□□□□□ -1.91
CTM1YHR109W GAS2Q06135 555 aa3.12□□□□□ -1.91
CTM1YHR109W TAZ1Q06510 381 aa3.12□□□□□ -1.91
CTM1YHR109W YLR012CQ07927 99 aa3.12□□□□□ -1.91
CTM1YHR109W MCT1Q12283 360 aa3.12□□□□□ -1.91
CTM1YHR109W MATALPHA1P0CY06 175 aa3.12□□□□□ -1.91
CTM1YHR109W HMLALPHA1P0CY07 175 aa3.12□□□□□ -1.91
CTM1YHR109W HPR1P17629 752 aaKnown RBP3.12□□□□□ -1.91
CTM1YHR109W KRE6P32486 720 aa3.12□□□□□ -1.91
CTM1YHR109W RPC37P36121 282 aa3.12□□□□□ -1.91
CTM1YHR109W PTH1P38876 190 aaKnown RBP3.12□□□□□ -1.91
CTM1YHR109W PET8P38921 284 aa3.12□□□□□ -1.91
CTM1YHR109W KRE9P39005 276 aa3.12□□□□□ -1.91
CTM1YHR109W YNL208WP40159 199 aaKnown RBP3.12□□□□□ -1.91
CTM1YHR109W FMC1P40491 155 aa3.12□□□□□ -1.91
CTM1YHR109W PMT4P46971 762 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms