RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C COQ10Q08058 207 aa7.01□□□□□ -1.29
SOD2YHR008C DFG16Q99234 619 aa7.01□□□□□ -1.29
SOD2YHR008C HNM1P19807 563 aa7□□□□□ -1.29
SOD2YHR008C DBP3P20447 523 aaKnown RBP7□□□□□ -1.29
SOD2YHR008C MRPL17P36528 281 aa7□□□□□ -1.29
SOD2YHR008C LNP1P38878 278 aa7□□□□□ -1.29
SOD2YHR008C MNN9P39107 395 aaKnown RBP7□□□□□ -1.29
SOD2YHR008C LAS21P40367 830 aa7□□□□□ -1.29
SOD2YHR008C PPT1P53043 513 aa7□□□□□ -1.29
SOD2YHR008C YIP5P53108 310 aa7□□□□□ -1.29
SOD2YHR008C RSC9Q03124 581 aa7□□□□□ -1.29
SOD2YHR008C YMR317WQ04893 1140 aa7□□□□□ -1.29
SOD2YHR008C IZH2Q12442 317 aa7□□□□□ -1.29
SOD2YHR008C NOT5Q12514 560 aaPredicted RBP7□□□□□ -1.29
SOD2YHR008C RPS8AP0CX39 200 aaKnown RBP6.99□□□□□ -1.29
SOD2YHR008C RPS8BP0CX40 200 aaKnown RBP6.99□□□□□ -1.29
SOD2YHR008C RPB8P20436 146 aa6.99□□□□□ -1.29
SOD2YHR008C LHP1P33399 275 aaKnown RBP6.99□□□□□ -1.29
SOD2YHR008C PRY2P36110 329 aa6.99□□□□□ -1.29
SOD2YHR008C YBR032WP38223 100 aa6.99□□□□□ -1.29
SOD2YHR008C YHR097CP38809 366 aaKnown RBP6.99□□□□□ -1.29
SOD2YHR008C DPB11P47027 764 aaPredicted RBP6.99□□□□□ -1.29
SOD2YHR008C YJR098CP47139 656 aa6.99□□□□□ -1.29
SOD2YHR008C YNL165WP53891 406 aa6.99□□□□□ -1.29
SOD2YHR008C MMT1Q03218 510 aa6.99□□□□□ -1.29
SOD2YHR008C VPS60Q03390 229 aa6.99□□□□□ -1.29
SOD2YHR008C UIP4Q08926 304 aa6.99□□□□□ -1.29
SOD2YHR008C YDL176WQ12027 708 aa6.99□□□□□ -1.29
SOD2YHR008C RIB2Q12362 591 aaKnown RBP6.99□□□□□ -1.29
SOD2YHR008C YBL113CQ7M4S9 792 aa6.99□□□□□ -1.29
SOD2YHR008C HTA1P04911 132 aaKnown RBP6.98□□□□□ -1.29
SOD2YHR008C MSN4P33749 630 aa6.98□□□□□ -1.29
SOD2YHR008C RCK1P38622 512 aa6.98□□□□□ -1.29
SOD2YHR008C QDR1P40475 563 aa6.98□□□□□ -1.29
SOD2YHR008C YPL191CQ08930 360 aa6.98□□□□□ -1.29
SOD2YHR008C URE2P23202 354 aaKnown RBP6.97□□□□□ -1.29
SOD2YHR008C TIM12P32830 109 aa6.97□□□□□ -1.29
SOD2YHR008C YGL015CP33199 130 aa6.97□□□□□ -1.29
SOD2YHR008C NAB3P38996 802 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
SOD2YHR008C MET28P40573 187 aa6.97□□□□□ -1.29
SOD2YHR008C GZF3P42944 551 aaKnown RBP6.97□□□□□ -1.29
SOD2YHR008C YFL066CP43538 392 aa6.97□□□□□ -1.29
SOD2YHR008C RSM24Q03976 319 aa6.97□□□□□ -1.29
SOD2YHR008C FAR8Q05040 523 aa6.97□□□□□ -1.29
SOD2YHR008C TPO3Q06451 622 aa6.97□□□□□ -1.29
SOD2YHR008C SYO1Q07395 620 aa6.97□□□□□ -1.29
SOD2YHR008C YCL048W-AQ2V2Q2 79 aa6.97□□□□□ -1.29
SOD2YHR008C YGR035W-AQ45U48 73 aa6.97□□□□□ -1.29
SOD2YHR008C MF(ALPHA)1P01149 165 aa6.96□□□□□ -1.3
SOD2YHR008C RPP1BP10622 106 aaKnown RBP6.96□□□□□ -1.3
SOD2YHR008C ARO3P14843 370 aaKnown RBP6.96□□□□□ -1.3
SOD2YHR008C YPK2P18961 677 aa6.96□□□□□ -1.3
SOD2YHR008C PRE2P30656 287 aaKnown RBP6.96□□□□□ -1.3
SOD2YHR008C SNC1P31109 117 aa6.96□□□□□ -1.3
SOD2YHR008C ARP2P32381 391 aaKnown RBP6.96□□□□□ -1.3
SOD2YHR008C SNM1P40993 198 aa6.96□□□□□ -1.3
SOD2YHR008C MRM2P53123 320 aa6.96□□□□□ -1.3
SOD2YHR008C TNA1P53322 534 aa6.96□□□□□ -1.3
SOD2YHR008C SMM1P53720 384 aaKnown RBP6.96□□□□□ -1.3
SOD2YHR008C ARC35P53731 342 aaKnown RBP6.96□□□□□ -1.3
SOD2YHR008C YDR102CQ03864 110 aa6.96□□□□□ -1.3
SOD2YHR008C KRE28Q04431 385 aa6.96□□□□□ -1.3
SOD2YHR008C HMS1Q12398 434 aa6.96□□□□□ -1.3
SOD2YHR008C RPL6BP05739 176 aaKnown RBP6.95□□□□□ -1.3
SOD2YHR008C SED4P25365 1065 aa6.95□□□□□ -1.3
SOD2YHR008C DEP1P31385 405 aa6.95□□□□□ -1.3
SOD2YHR008C MDL1P33310 695 aa6.95□□□□□ -1.3
SOD2YHR008C YHR219WP38900 624 aa6.95□□□□□ -1.3
SOD2YHR008C GDI1P39958 451 aaKnown RBP6.95□□□□□ -1.3
SOD2YHR008C YGR201CP42936 225 aa6.95□□□□□ -1.3
SOD2YHR008C YJR142WP47173 342 aa6.95□□□□□ -1.3
SOD2YHR008C YDR387CQ04162 555 aa6.95□□□□□ -1.3
SOD2YHR008C YPR127WQ06494 345 aa6.95□□□□□ -1.3
SOD2YHR008C YML003WP0CF16 290 aa6.94□□□□□ -1.3
SOD2YHR008C YER190C-BP0CX94 160 aa6.94□□□□□ -1.3
SOD2YHR008C YEL077W-AP0CX95 160 aa6.94□□□□□ -1.3
SOD2YHR008C YGR296C-BP0CX96 160 aa6.94□□□□□ -1.3
SOD2YHR008C YPL283W-BP0CX97 160 aa6.94□□□□□ -1.3
SOD2YHR008C YPR204C-AP0CX98 160 aa6.94□□□□□ -1.3
SOD2YHR008C YFL068WP0CX99 160 aa6.94□□□□□ -1.3
SOD2YHR008C YLL066W-AP0CY00 160 aa6.94□□□□□ -1.3
SOD2YHR008C YLL067W-AP0CY01 160 aa6.94□□□□□ -1.3
SOD2YHR008C CLG1P35190 452 aa6.94□□□□□ -1.3
SOD2YHR008C ECM8P38246 354 aa6.94□□□□□ -1.3
SOD2YHR008C YBR096WP38256 230 aa6.94□□□□□ -1.3
SOD2YHR008C ISC1P40015 477 aaKnown RBP6.94□□□□□ -1.3
SOD2YHR008C SGN1P40561 250 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
SOD2YHR008C NUP57P48837 541 aa6.94□□□□□ -1.3
SOD2YHR008C MPC1P53157 130 aaKnown RBP6.94□□□□□ -1.3
SOD2YHR008C YPL077CQ02831 240 aa6.94□□□□□ -1.3
SOD2YHR008C SPO77Q06134 477 aa6.94□□□□□ -1.3
SOD2YHR008C RTN2Q12443 393 aa6.94□□□□□ -1.3
SOD2YHR008C RAX2Q12465 1220 aa6.94□□□□□ -1.3
SOD2YHR008C ARG3P05150 338 aa6.93□□□□□ -1.3
SOD2YHR008C HAP4P14064 554 aa6.93□□□□□ -1.3
SOD2YHR008C YNK1P36010 153 aaKnown RBP6.93□□□□□ -1.3
SOD2YHR008C JEN1P36035 616 aa6.93□□□□□ -1.3
SOD2YHR008C PIC2P40035 300 aa6.93□□□□□ -1.3
SOD2YHR008C YIL166CP40445 542 aa6.93□□□□□ -1.3
SOD2YHR008C YGL235WP53071 178 aa6.93□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms