RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C YPR091CQ06833 770 aa3.43□□□□□ -1.86
OTU1YFL044C ISN1Q99312 450 aa3.43□□□□□ -1.86
OTU1YFL044C FLO9P39712 1322 aa3.43□□□□□ -1.86
OTU1YFL044C CAR2P07991 424 aaKnown RBP3.42□□□□□ -1.86
OTU1YFL044C RPL20AP0CX23 172 aaKnown RBP3.42□□□□□ -1.86
OTU1YFL044C RPL20BP0CX24 172 aaPredicted RBP3.42□□□□□ -1.86
OTU1YFL044C PDA1P16387 420 aaKnown RBP3.42□□□□□ -1.86
OTU1YFL044C DAP2P18962 818 aa3.42□□□□□ -1.86
OTU1YFL044C PBN1P25580 416 aa3.42□□□□□ -1.86
OTU1YFL044C ATS1P31386 333 aa3.42□□□□□ -1.86
OTU1YFL044C MDL1P33310 695 aa3.42□□□□□ -1.86
OTU1YFL044C SPP381P38282 291 aaPredicted RBP3.42□□□□□ -1.86
OTU1YFL044C RIX1P38883 763 aaPredicted RBP3.42□□□□□ -1.86
OTU1YFL044C SMX2P40204 77 aaKnown RBP3.42□□□□□ -1.86
OTU1YFL044C RPE1P46969 238 aa3.42□□□□□ -1.86
OTU1YFL044C NAS6P50086 228 aa3.42□□□□□ -1.86
OTU1YFL044C IMD4P50094 524 aaKnown RBP3.42□□□□□ -1.86
OTU1YFL044C BIO4P53630 237 aa3.42□□□□□ -1.86
OTU1YFL044C CIK1Q01649 594 aa3.42□□□□□ -1.86
OTU1YFL044C NUP116Q02630 1113 aa3.42□□□□□ -1.86
OTU1YFL044C GAS2Q06135 555 aa3.42□□□□□ -1.86
OTU1YFL044C YLR446WQ06204 433 aa3.42□□□□□ -1.86
OTU1YFL044C ARO10Q06408 635 aa3.42□□□□□ -1.86
OTU1YFL044C YPL191CQ08930 360 aa3.42□□□□□ -1.86
OTU1YFL044C RLM1Q12224 676 aa3.42□□□□□ -1.86
OTU1YFL044C MTR10Q99189 972 aa3.42□□□□□ -1.86
OTU1YFL044C YPR096CO13587 100 aa3.41□□□□□ -1.86
OTU1YFL044C MF(ALPHA)1P01149 165 aa3.41□□□□□ -1.86
OTU1YFL044C RHO2P06781 192 aa3.41□□□□□ -1.86
OTU1YFL044C PET111P08468 800 aa3.41□□□□□ -1.86
OTU1YFL044C ART10P18634 518 aaKnown RBP3.41□□□□□ -1.86
OTU1YFL044C MAK32P23060 363 aa3.41□□□□□ -1.86
OTU1YFL044C GPI12P23797 304 aa3.41□□□□□ -1.86
OTU1YFL044C RRP7P25368 297 aaPredicted RBP3.41□□□□□ -1.86
OTU1YFL044C ERG9P29704 444 aa3.41□□□□□ -1.86
OTU1YFL044C MRE11P32829 692 aa3.41□□□□□ -1.86
OTU1YFL044C RPS0AP32905 252 aaKnown RBP3.41□□□□□ -1.86
OTU1YFL044C RPC34P32910 317 aa3.41□□□□□ -1.86
OTU1YFL044C SOF1P33750 489 aaKnown RBP3.41□□□□□ -1.86
OTU1YFL044C RSM22P36056 628 aa3.41□□□□□ -1.86
OTU1YFL044C CMC1P36064 111 aa3.41□□□□□ -1.86
OTU1YFL044C VPS51P36116 164 aa3.41□□□□□ -1.86
OTU1YFL044C RIM2P38127 377 aa3.41□□□□□ -1.86
OTU1YFL044C HSM3P38348 480 aa3.41□□□□□ -1.86
OTU1YFL044C PHO89P38361 574 aa3.41□□□□□ -1.86
OTU1YFL044C YMR262WP38430 313 aa3.41□□□□□ -1.86
OTU1YFL044C GRE3P38715 327 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
OTU1YFL044C GDI1P39958 451 aaKnown RBP3.41□□□□□ -1.86
OTU1YFL044C ECM10P39987 644 aa3.41□□□□□ -1.86
OTU1YFL044C TDA10P42938 290 aa3.41□□□□□ -1.86
OTU1YFL044C DIA3P52290 468 aa3.41□□□□□ -1.86
OTU1YFL044C OGG1P53397 376 aaPredicted RBP3.41□□□□□ -1.86
OTU1YFL044C RHO4Q00246 291 aa3.41□□□□□ -1.86
OTU1YFL044C RNY1Q02933 434 aaKnown RBP3.41□□□□□ -1.86
OTU1YFL044C DCR2Q05924 578 aa3.41□□□□□ -1.86
OTU1YFL044C VPS74Q06385 345 aa3.41□□□□□ -1.86
OTU1YFL044C YLL007CQ07799 665 aa3.41□□□□□ -1.86
OTU1YFL044C FMP40Q08968 688 aaPredicted RBP3.41□□□□□ -1.86
OTU1YFL044C PRP46Q12417 451 aaPredicted RBP3.41□□□□□ -1.86
OTU1YFL044C TAD3Q9URQ3 322 aa3.41□□□□□ -1.86
OTU1YFL044C YFR010W-AP0C5N0 62 aa3.4□□□□□ -1.87
OTU1YFL044C COS2P0CX12 379 aa3.4□□□□□ -1.87
OTU1YFL044C COS3P0CX13 379 aa3.4□□□□□ -1.87
OTU1YFL044C RPL3P14126 387 aaKnown RBP3.4□□□□□ -1.87
OTU1YFL044C ERD1P16151 362 aa3.4□□□□□ -1.87
OTU1YFL044C RPB5P20434 215 aa3.4□□□□□ -1.87
OTU1YFL044C REC107P21651 314 aa3.4□□□□□ -1.87
OTU1YFL044C BUB2P26448 306 aaPredicted RBP3.4□□□□□ -1.87
OTU1YFL044C SSE2P32590 693 aaKnown RBP3.4□□□□□ -1.87
OTU1YFL044C YBR144CP34215 104 aa3.4□□□□□ -1.87
OTU1YFL044C TPO5P36029 618 aa3.4□□□□□ -1.87
OTU1YFL044C MAL32P38158 584 aa3.4□□□□□ -1.87
OTU1YFL044C FES1P38260 290 aa3.4□□□□□ -1.87
OTU1YFL044C ATG7P38862 630 aa3.4□□□□□ -1.87
OTU1YFL044C MRX1P40050 688 aa3.4□□□□□ -1.87
OTU1YFL044C SOK1P40317 901 aa3.4□□□□□ -1.87
OTU1YFL044C ALG5P40350 334 aa3.4□□□□□ -1.87
OTU1YFL044C CIN1P40987 1014 aa3.4□□□□□ -1.87
OTU1YFL044C COS4P43542 379 aa3.4□□□□□ -1.87
OTU1YFL044C DPB11P47027 764 aaPredicted RBP3.4□□□□□ -1.87
OTU1YFL044C PGU1P47180 361 aa3.4□□□□□ -1.87
OTU1YFL044C YJR154WP47181 346 aa3.4□□□□□ -1.87
OTU1YFL044C HOS2P53096 452 aaPredicted RBP3.4□□□□□ -1.87
OTU1YFL044C TWF1P53250 332 aa3.4□□□□□ -1.87
OTU1YFL044C MPA43P53583 542 aaPredicted RBP3.4□□□□□ -1.87
OTU1YFL044C GOR1P53839 350 aa3.4□□□□□ -1.87
OTU1YFL044C IDP3P53982 420 aaKnown RBP3.4□□□□□ -1.87
OTU1YFL044C YPL107WQ02873 248 aa3.4□□□□□ -1.87
OTU1YFL044C MET31Q03081 177 aa3.4□□□□□ -1.87
OTU1YFL044C MSC1Q03104 513 aa3.4□□□□□ -1.87
OTU1YFL044C ECM11Q04110 302 aa3.4□□□□□ -1.87
OTU1YFL044C DPB4Q04603 196 aaKnown RBP3.4□□□□□ -1.87
OTU1YFL044C YDR124WQ04608 324 aa3.4□□□□□ -1.87
OTU1YFL044C YMR310CQ04867 317 aaPredicted RBP3.4□□□□□ -1.87
OTU1YFL044C RBS1Q05672 457 aaKnown RBP3.4□□□□□ -1.87
OTU1YFL044C YLR053CQ12026 108 aa3.4□□□□□ -1.87
OTU1YFL044C SFG1Q12507 346 aa3.4□□□□□ -1.87
OTU1YFL044C Q0144Q9ZZW2 109 aa3.4□□□□□ -1.87
OTU1YFL044C DST1P07273 309 aa3.39□□□□□ -1.87
OTU1YFL044C AQY1P0CD91 305 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 84.8 ms