RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C SPO77Q06134 477 aa-0.33□□□□□ -2.46
SPG3YDR504C DET1Q99288 334 aaKnown RBP-0.33□□□□□ -2.46
SPG3YDR504C YRF1-4O13559 1382 aa-0.33□□□□□ -2.46
SPG3YDR504C HIS3P06633 220 aa-0.34□□□□□ -2.46
SPG3YDR504C RRP7P25368 297 aaPredicted RBP-0.34□□□□□ -2.46
SPG3YDR504C SLM4P38247 162 aa-0.34□□□□□ -2.46
SPG3YDR504C DSE1P40077 573 aa-0.34□□□□□ -2.46
SPG3YDR504C YJR141WP47172 347 aaPredicted RBP-0.34□□□□□ -2.46
SPG3YDR504C COS6P53344 381 aa-0.34□□□□□ -2.46
SPG3YDR504C YOL162WP0CF19 215 aa-0.35□□□□□ -2.47
SPG3YDR504C SLM2P53955 656 aa-0.35□□□□□ -2.47
SPG3YDR504C PRR2Q12310 699 aa-0.35□□□□□ -2.47
SPG3YDR504C TRM10Q12400 293 aa-0.35□□□□□ -2.47
SPG3YDR504C UBA3Q99344 299 aa-0.35□□□□□ -2.47
SPG3YDR504C MRPL8P22353 238 aa-0.36□□□□□ -2.47
SPG3YDR504C PHO91P27514 894 aa-0.36□□□□□ -2.47
SPG3YDR504C UFD1P53044 361 aa-0.36□□□□□ -2.47
SPG3YDR504C MZM1Q03429 123 aaPredicted RBP-0.36□□□□□ -2.47
SPG3YDR504C NOP6Q07623 225 aaKnown RBP-0.36□□□□□ -2.47
SPG3YDR504C SHS1Q07657 551 aa-0.36□□□□□ -2.47
SPG3YDR504C TAF10Q12030 206 aa-0.36□□□□□ -2.47
SPG3YDR504C ERP3Q12403 225 aa-0.36□□□□□ -2.47
SPG3YDR504C YCR051WP25631 222 aa-0.37□□□□□ -2.47
SPG3YDR504C PAC11P40960 533 aa-0.37□□□□□ -2.47
SPG3YDR504C IRC6P43615 237 aa-0.37□□□□□ -2.47
SPG3YDR504C YPL247CQ12523 523 aa-0.37□□□□□ -2.47
SPG3YDR504C AFI1Q99222 893 aa-0.37□□□□□ -2.47
SPG3YDR504C DPM1P14020 267 aaKnown RBP-0.38□□□□□ -2.47
SPG3YDR504C IMP2'P32351 346 aa-0.38□□□□□ -2.47
SPG3YDR504C YKL187CP34231 750 aa-0.38□□□□□ -2.47
SPG3YDR504C PEX5P35056 612 aa-0.38□□□□□ -2.47
SPG3YDR504C YHR045WP38775 560 aa-0.38□□□□□ -2.47
SPG3YDR504C EPL1P43572 832 aa-0.38□□□□□ -2.47
SPG3YDR504C TPC1P53257 314 aa-0.38□□□□□ -2.47
SPG3YDR504C TDH1P00360 332 aaKnown RBP-0.39□□□□□ -2.47
SPG3YDR504C REC107P21651 314 aa-0.39□□□□□ -2.47
SPG3YDR504C YOR062CP36025 268 aa-0.39□□□□□ -2.47
SPG3YDR504C PCH2P38126 564 aa-0.39□□□□□ -2.47
SPG3YDR504C MNL1P38888 796 aa-0.39□□□□□ -2.47
SPG3YDR504C FAD1P38913 306 aa-0.39□□□□□ -2.47
SPG3YDR504C RTT102P53330 157 aa-0.39□□□□□ -2.47
SPG3YDR504C RRB1Q04225 511 aaKnown RBP-0.39□□□□□ -2.47
SPG3YDR504C GRH1Q04410 372 aaKnown RBP-0.39□□□□□ -2.47
SPG3YDR504C YLR456WQ06199 204 aa-0.39□□□□□ -2.47
SPG3YDR504C CBP2P03874 630 aaPredicted RBP-0.4□□□□□ -2.47
SPG3YDR504C CDC7P06243 507 aa-0.4□□□□□ -2.47
SPG3YDR504C GFD2P25370 566 aaKnown RBP-0.4□□□□□ -2.47
SPG3YDR504C EDC2P40023 145 aaPredicted RBP-0.4□□□□□ -2.47
SPG3YDR504C RPL37BP51402 88 aaKnown RBP-0.4□□□□□ -2.47
SPG3YDR504C ZWF1P11412 505 aaKnown RBP-0.41□□□□□ -2.48
SPG3YDR504C DPB3P27344 201 aa-0.41□□□□□ -2.48
SPG3YDR504C YHR182WP38870 785 aa-0.41□□□□□ -2.48
SPG3YDR504C RPL37AP49166 88 aaKnown RBP-0.41□□□□□ -2.48
SPG3YDR504C MND1P53102 219 aa-0.41□□□□□ -2.48
SPG3YDR504C PGA3Q12746 312 aaKnown RBP-0.41□□□□□ -2.48
SPG3YDR504C PRP8P33334 2413 aaKnown RBP-0.42□□□□□ -2.48
SPG3YDR504C MHP1P43638 1398 aa-0.42□□□□□ -2.48
SPG3YDR504C SGA1P08019 549 aa-0.42□□□□□ -2.48
SPG3YDR504C ATG15P25641 520 aa-0.42□□□□□ -2.48
SPG3YDR504C YKR045CP36138 183 aa-0.42□□□□□ -2.48
SPG3YDR504C YHL044WP38727 235 aa-0.42□□□□□ -2.48
SPG3YDR504C BIO4P53630 237 aa-0.42□□□□□ -2.48
SPG3YDR504C ALG9P53868 555 aaKnown RBP-0.42□□□□□ -2.48
SPG3YDR504C YOL019WQ08157 551 aa-0.42□□□□□ -2.48
SPG3YDR504C ISA2Q12425 185 aa-0.42□□□□□ -2.48
SPG3YDR504C PFK27Q12471 397 aaPredicted RBP-0.42□□□□□ -2.48
SPG3YDR504C ERV1P27882 189 aa-0.43□□□□□ -2.48
SPG3YDR504C KDX1P36005 433 aa-0.43□□□□□ -2.48
SPG3YDR504C YHR177WP38867 453 aa-0.43□□□□□ -2.48
SPG3YDR504C MRPL49P40858 161 aaPredicted RBP-0.43□□□□□ -2.48
SPG3YDR504C CTS2Q06350 511 aa-0.43□□□□□ -2.48
SPG3YDR504C MIM1Q08176 113 aa-0.43□□□□□ -2.48
SPG3YDR504C AAD15Q08361 143 aa-0.43□□□□□ -2.48
SPG3YDR504C RED1P14291 827 aa-0.44□□□□□ -2.48
SPG3YDR504C VPS1P21576 704 aaKnown RBP-0.44□□□□□ -2.48
SPG3YDR504C YCR102CP25608 368 aa-0.44□□□□□ -2.48
SPG3YDR504C MYO3P36006 1272 aa-0.44□□□□□ -2.48
SPG3YDR504C UTP25P40498 721 aaKnown RBP-0.44□□□□□ -2.48
SPG3YDR504C YNL320WP42840 284 aa-0.44□□□□□ -2.48
SPG3YDR504C PMT4P46971 762 aa-0.44□□□□□ -2.48
SPG3YDR504C OSH6Q02201 448 aa-0.44□□□□□ -2.48
SPG3YDR504C VPS72Q03388 795 aa-0.44□□□□□ -2.48
SPG3YDR504C COY1P34237 679 aa-0.45□□□□□ -2.48
SPG3YDR504C MPE1P35728 441 aaKnown RBP-0.45□□□□□ -2.48
SPG3YDR504C GLE2P40066 365 aa-0.45□□□□□ -2.48
SPG3YDR504C HUA1P40325 198 aa-0.45□□□□□ -2.48
SPG3YDR504C MRPL19P53875 158 aa-0.45□□□□□ -2.48
SPG3YDR504C YOL075CQ08234 1294 aa-0.45□□□□□ -2.48
SPG3YDR504C MRP7P12687 371 aa-0.46□□□□□ -2.48
SPG3YDR504C URA7P28274 579 aaKnown RBP-0.46□□□□□ -2.48
SPG3YDR504C NOC2P39744 710 aaKnown RBP-0.46□□□□□ -2.48
SPG3YDR504C GPD2P41911 440 aaKnown RBP-0.46□□□□□ -2.48
SPG3YDR504C MPS2P53159 387 aa-0.46□□□□□ -2.48
SPG3YDR504C RPN6Q12377 434 aa-0.46□□□□□ -2.48
SPG3YDR504C AGC1Q12482 902 aa-0.46□□□□□ -2.48
SPG3YDR504C PEP8P40335 379 aa-0.47□□□□□ -2.48
SPG3YDR504C MED1Q12321 566 aa-0.47□□□□□ -2.48
SPG3YDR504C RRI2Q12348 645 aa-0.47□□□□□ -2.48
SPG3YDR504C VAM7P32912 316 aa-0.48□□□□□ -2.49
SPG3YDR504C RPL10P41805 221 aaKnown RBP-0.48□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms