RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C DFG16Q99234 619 aa5.25□□□□□ -1.57
SEC20YDR498C DET1Q99288 334 aaKnown RBP5.25□□□□□ -1.57
SEC20YDR498C YEL009C-AA0A023PZF2 135 aa5.24□□□□□ -1.57
SEC20YDR498C GPM1P00950 247 aaKnown RBP5.24□□□□□ -1.57
SEC20YDR498C AI1P03875 834 aa5.24□□□□□ -1.57
SEC20YDR498C RPA135P22138 1203 aaKnown RBP5.24□□□□□ -1.57
SEC20YDR498C GPI12P23797 304 aa5.24□□□□□ -1.57
SEC20YDR498C IMG1P25626 169 aa5.24□□□□□ -1.57
SEC20YDR498C CWP1P28319 239 aa5.24□□□□□ -1.57
SEC20YDR498C NAB2P32505 525 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57 RIP-Chip
SEC20YDR498C YEF1P32622 495 aa5.24□□□□□ -1.57
SEC20YDR498C TIM12P32830 109 aa5.24□□□□□ -1.57
SEC20YDR498C TEF4P36008 412 aaKnown RBP5.24□□□□□ -1.57
SEC20YDR498C NVJ1P38881 321 aa5.24□□□□□ -1.57
SEC20YDR498C CHL4P38907 458 aa5.24□□□□□ -1.57
SEC20YDR498C PFS2P42841 465 aaKnown RBP5.24□□□□□ -1.57
SEC20YDR498C YFR054CP43622 192 aa5.24□□□□□ -1.57
SEC20YDR498C TIM54P47045 478 aa5.24□□□□□ -1.57
SEC20YDR498C YAE1P47118 141 aaPredicted RBP5.24□□□□□ -1.57
SEC20YDR498C PPT1P53043 513 aa5.24□□□□□ -1.57
SEC20YDR498C YNR040WP53736 256 aa5.24□□□□□ -1.57
SEC20YDR498C PFA5Q03289 374 aa5.24□□□□□ -1.57
SEC20YDR498C RCF1Q03713 159 aa5.24□□□□□ -1.57
SEC20YDR498C GRX3Q03835 250 aa5.24□□□□□ -1.57
SEC20YDR498C YLR030WQ07967 263 aa5.24□□□□□ -1.57
SEC20YDR498C BRX1Q08235 291 aaKnown RBP5.24□□□□□ -1.57
SEC20YDR498C YIL046W-AQ3E7Z4 54 aa5.24□□□□□ -1.57
SEC20YDR498C TRA1P38811 3744 aa5.23□□□□□ -1.57
SEC20YDR498C SEN1Q00416 2231 aaKnown RBP5.23□□□□□ -1.57
SEC20YDR498C KIN28P06242 306 aa5.23□□□□□ -1.57
SEC20YDR498C SIR2P06700 562 aa5.23□□□□□ -1.57
SEC20YDR498C ADE5,7P07244 802 aaKnown RBP5.23□□□□□ -1.57
SEC20YDR498C RPL20AP0CX23 172 aaKnown RBP5.23□□□□□ -1.57
SEC20YDR498C RPL20BP0CX24 172 aaPredicted RBP5.23□□□□□ -1.57
SEC20YDR498C ERD2P18414 219 aa5.23□□□□□ -1.57
SEC20YDR498C YPK2P18961 677 aa5.23□□□□□ -1.57
SEC20YDR498C ERG4P25340 473 aa5.23□□□□□ -1.57
SEC20YDR498C PTC6P25646 442 aa5.23□□□□□ -1.57
SEC20YDR498C ASF2P32448 525 aaPredicted RBP5.23□□□□□ -1.57
SEC20YDR498C YPT7P32939 208 aa5.23□□□□□ -1.57
SEC20YDR498C PET112P33893 541 aa5.23□□□□□ -1.57
SEC20YDR498C OCA5P38738 679 aa5.23□□□□□ -1.57
SEC20YDR498C YHR035WP38769 630 aa5.23□□□□□ -1.57
SEC20YDR498C ICE2P40499 491 aa5.23□□□□□ -1.57
SEC20YDR498C GDS1P41913 522 aa5.23□□□□□ -1.57
SEC20YDR498C SPG5P42933 373 aa5.23□□□□□ -1.57
SEC20YDR498C ALK1P43633 760 aaKnown RBP5.23□□□□□ -1.57
SEC20YDR498C ALB1P47019 175 aaPredicted RBP5.23□□□□□ -1.57
SEC20YDR498C YGR266WP53326 701 aa5.23□□□□□ -1.57
SEC20YDR498C PLB2Q03674 706 aa5.23□□□□□ -1.57
SEC20YDR498C YMR252CQ04814 134 aa5.23□□□□□ -1.57
SEC20YDR498C TAZ1Q06510 381 aa5.23□□□□□ -1.57
SEC20YDR498C BSC6Q08280 497 aa5.23□□□□□ -1.57
SEC20YDR498C THI72Q08579 599 aa5.23□□□□□ -1.57
SEC20YDR498C RRG7Q08774 242 aaPredicted RBP5.23□□□□□ -1.57
SEC20YDR498C YDL007C-AQ2V2Q0 85 aa5.23□□□□□ -1.57
SEC20YDR498C PHO4P07270 312 aaKnown RBP5.22□□□□□ -1.57
SEC20YDR498C RPB10P22139 70 aa5.22□□□□□ -1.57
SEC20YDR498C MSN1P22148 382 aa5.22□□□□□ -1.57
SEC20YDR498C YJU2P28320 278 aaPredicted RBP5.22□□□□□ -1.57
SEC20YDR498C FAA1P30624 700 aaKnown RBP5.22□□□□□ -1.57
SEC20YDR498C EMP70P32802 667 aa5.22□□□□□ -1.57
SEC20YDR498C SUR1P33300 382 aa5.22□□□□□ -1.57
SEC20YDR498C MDL1P33310 695 aa5.22□□□□□ -1.57
SEC20YDR498C THI2P38141 450 aa5.22□□□□□ -1.57
SEC20YDR498C CHS7P38843 316 aa5.22□□□□□ -1.57
SEC20YDR498C HRB1P38922 454 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
SEC20YDR498C YGR067CP53243 804 aa5.22□□□□□ -1.57
SEC20YDR498C RNH70P53331 553 aa5.22□□□□□ -1.57
SEC20YDR498C YNR062CP53748 327 aa5.22□□□□□ -1.57
SEC20YDR498C NCE101Q02820 53 aa5.22□□□□□ -1.57
SEC20YDR498C RRN11Q04712 507 aa5.22□□□□□ -1.57
SEC20YDR498C PEX10Q05568 337 aa5.22□□□□□ -1.57
SEC20YDR498C ENV7Q12003 364 aa5.22□□□□□ -1.57
SEC20YDR498C YDL177CQ12257 170 aa5.22□□□□□ -1.57
SEC20YDR498C TY1A-NL1Q12391 440 aaKnown RBP5.22□□□□□ -1.57
SEC20YDR498C RTN2Q12443 393 aa5.22□□□□□ -1.57
SEC20YDR498C LSO1Q3E827 93 aa5.22□□□□□ -1.57
SEC20YDR498C PDE2P06776 526 aa5.21□□□□□ -1.58
SEC20YDR498C PRE7P23724 241 aaKnown RBP5.21□□□□□ -1.58
SEC20YDR498C PRE2P30656 287 aaKnown RBP5.21□□□□□ -1.58
SEC20YDR498C HOG1P32485 435 aa5.21□□□□□ -1.58
SEC20YDR498C IPI1P38803 334 aaPredicted RBP5.21□□□□□ -1.58
SEC20YDR498C SKN7P38889 622 aa5.21□□□□□ -1.58
SEC20YDR498C BUR6P40096 142 aa5.21□□□□□ -1.58
SEC20YDR498C YIL165CP40446 119 aa5.21□□□□□ -1.58
SEC20YDR498C FMC1P40491 155 aa5.21□□□□□ -1.58
SEC20YDR498C YKE4P40544 346 aa5.21□□□□□ -1.58
SEC20YDR498C NAS2P40555 220 aa5.21□□□□□ -1.58
SEC20YDR498C BAP3P41815 604 aa5.21□□□□□ -1.58
SEC20YDR498C SER2P42941 309 aa5.21□□□□□ -1.58
SEC20YDR498C SNO3P43544 222 aa5.21□□□□□ -1.58
SEC20YDR498C MSE1P48525 536 aa5.21□□□□□ -1.58
SEC20YDR498C ARO8P53090 500 aaKnown RBP5.21□□□□□ -1.58
SEC20YDR498C YGR012WP53206 393 aa5.21□□□□□ -1.58
SEC20YDR498C RRN9P53437 365 aa5.21□□□□□ -1.58
SEC20YDR498C NRM1P53718 249 aa5.21□□□□□ -1.58
SEC20YDR498C YAT1P80235 687 aa5.21□□□□□ -1.58
SEC20YDR498C CIK1Q01649 594 aa5.21□□□□□ -1.58
SEC20YDR498C BNA5Q05979 453 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms