RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	EGT2	P42835	1041 aa		3.53	□□□□□ -1.84
TRM1	YDR120C	YFR057W	P43625	151 aa		3.53	□□□□□ -1.84
TRM1	YDR120C	BNS1	P50084	137 aa		3.53	□□□□□ -1.84
TRM1	YDR120C	HST1	P53685	503 aa		3.53	□□□□□ -1.84
TRM1	YDR120C	CMS1	Q07897	291 aa	Known RBP	3.53	□□□□□ -1.84
TRM1	YDR120C	REX3	Q12090	404 aa		3.53	□□□□□ -1.84
TRM1	YDR120C	HIF1	Q12373	385 aa		3.53	□□□□□ -1.84
TRM1	YDR120C	RAD50	P12753	1312 aa		3.53	□□□□□ -1.84
TRM1	YDR120C	ILV1	P00927	576 aa	Known RBP	3.53	□□□□□ -1.85
TRM1	YDR120C	HXT2	P23585	541 aa		3.53	□□□□□ -1.85
TRM1	YDR120C	SSE1	P32589	693 aa	Known RBP	3.53	□□□□□ -1.85
TRM1	YDR120C	SPO23	P33757	523 aa		3.53	□□□□□ -1.85
TRM1	YDR120C	AIM10	P39965	576 aa	Known RBP	3.53	□□□□□ -1.85
TRM1	YDR120C	MOB1	P40484	314 aa		3.53	□□□□□ -1.85
TRM1	YDR120C	SMD2	Q06217	110 aa	Known RBP	3.53	□□□□□ -1.85
TRM1	YDR120C	MFG1	Q07684	458 aa		3.53	□□□□□ -1.85
TRM1	YDR120C	CKI1	P20485	582 aa		3.52	□□□□□ -1.85
TRM1	YDR120C	RVS161	P25343	265 aa	Known RBP	3.52	□□□□□ -1.85
TRM1	YDR120C	PRS1	P32895	427 aa	Known RBP	3.52	□□□□□ -1.85
TRM1	YDR120C	ANR2	P36090	516 aa	Predicted RBP	3.52	□□□□□ -1.85
TRM1	YDR120C	MRPL10	P36520	322 aa		3.52	□□□□□ -1.85
TRM1	YDR120C	ECM8	P38246	354 aa		3.52	□□□□□ -1.85
TRM1	YDR120C	YHL026C	P38740	315 aa		3.52	□□□□□ -1.85
TRM1	YDR120C	BIR1	P47134	954 aa		3.52	□□□□□ -1.85
TRM1	YDR120C	SMP3	Q04174	516 aa		3.52	□□□□□ -1.85
TRM1	YDR120C	CSM3	Q04659	317 aa		3.52	□□□□□ -1.85
TRM1	YDR120C	RBD2	Q12270	262 aa		3.52	□□□□□ -1.85
TRM1	YDR120C	GLE1	Q12315	538 aa		3.52	□□□□□ -1.85
TRM1	YDR120C	YDL199C	Q12407	687 aa		3.52	□□□□□ -1.85
TRM1	YDR120C	STF1	P01098	86 aa		3.51	□□□□□ -1.85
TRM1	YDR120C	FAR1	P21268	830 aa		3.51	□□□□□ -1.85
TRM1	YDR120C	ZUO1	P32527	433 aa	Known RBP	3.51	□□□□□ -1.85
TRM1	YDR120C	SRB2	P34162	210 aa		3.51	□□□□□ -1.85
TRM1	YDR120C	LIN1	P38852	340 aa	Predicted RBP	3.51	□□□□□ -1.85
TRM1	YDR120C	ATG18	P43601	500 aa		3.51	□□□□□ -1.85
TRM1	YDR120C	YHC3	P47040	408 aa		3.51	□□□□□ -1.85
TRM1	YDR120C	CLD1	P53264	445 aa		3.51	□□□□□ -1.85
TRM1	YDR120C	CRH1	P53301	507 aa		3.51	□□□□□ -1.85
TRM1	YDR120C	PRO2	P54885	456 aa	Known RBP	3.51	□□□□□ -1.85
TRM1	YDR120C	MGR3	Q04472	501 aa		3.51	□□□□□ -1.85
TRM1	YDR120C	YLH47	Q06493	454 aa		3.51	□□□□□ -1.85
TRM1	YDR120C	ARR1	Q06596	294 aa		3.51	□□□□□ -1.85
TRM1	YDR120C	DET1	Q99288	334 aa	Known RBP	3.51	□□□□□ -1.85
TRM1	YDR120C	YEL045C	P32616	141 aa		3.5	□□□□□ -1.85
TRM1	YDR120C	CTK3	P46963	296 aa	Predicted RBP	3.5	□□□□□ -1.85
TRM1	YDR120C	WTM1	Q12363	437 aa	Known RBP	3.5	□□□□□ -1.85
TRM1	YDR120C	CHA1	P25379	360 aa	Known RBP	3.5	□□□□□ -1.85
TRM1	YDR120C	PRR1	P28708	518 aa		3.5	□□□□□ -1.85
TRM1	YDR120C	HXT1	P32465	570 aa		3.5	□□□□□ -1.85
TRM1	YDR120C	RTC2	P38279	296 aa		3.5	□□□□□ -1.85
TRM1	YDR120C	ALP1	P38971	573 aa		3.5	□□□□□ -1.85
TRM1	YDR120C	CIN2	P46670	268 aa		3.5	□□□□□ -1.85
TRM1	YDR120C	TRF5	P48561	642 aa	Known RBP	3.5	□□□□□ -1.85
TRM1	YDR120C	SDT1	P53078	280 aa		3.5	□□□□□ -1.85
TRM1	YDR120C	SHY1	P53266	389 aa		3.5	□□□□□ -1.85
TRM1	YDR120C	YOL075C	Q08234	1294 aa		3.5	□□□□□ -1.85
TRM1	YDR120C	NAG1	Q8TGN9	163 aa		3.5	□□□□□ -1.85
TRM1	YDR120C	MXR2	P25566	168 aa		3.49	□□□□□ -1.85
TRM1	YDR120C	MRPS5	P33759	307 aa		3.49	□□□□□ -1.85
TRM1	YDR120C	BMH2	P34730	273 aa	Known RBP	3.49	□□□□□ -1.85
TRM1	YDR120C	ATG7	P38862	630 aa		3.49	□□□□□ -1.85
TRM1	YDR120C	GAA1	P39012	614 aa		3.49	□□□□□ -1.85
TRM1	YDR120C	MIG3	P39943	394 aa		3.49	□□□□□ -1.85
TRM1	YDR120C	YMR134W	P40207	237 aa		3.49	□□□□□ -1.85
TRM1	YDR120C	UTP18	P40362	594 aa	Predicted RBP	3.49	□□□□□ -1.85
TRM1	YDR120C	FIS1	P40515	155 aa		3.49	□□□□□ -1.85
TRM1	YDR120C	KEG1	P43614	200 aa		3.49	□□□□□ -1.85
TRM1	YDR120C	LST7	P53237	242 aa		3.49	□□□□□ -1.85
TRM1	YDR120C	PAL1	Q05518	499 aa	Known RBP	3.49	□□□□□ -1.85
TRM1	YDR120C	SKG6	P32900	734 aa	Predicted RBP	3.48	□□□□□ -1.85
TRM1	YDR120C	SUR1	P33300	382 aa		3.48	□□□□□ -1.85
TRM1	YDR120C	YOX1	P34161	385 aa		3.48	□□□□□ -1.85
TRM1	YDR120C	COY1	P34237	679 aa		3.48	□□□□□ -1.85
TRM1	YDR120C	YHR182W	P38870	785 aa		3.48	□□□□□ -1.85
TRM1	YDR120C	BAT1	P38891	393 aa	Known RBP	3.48	□□□□□ -1.85
TRM1	YDR120C	PRP39	P39682	629 aa	Known RBP	3.48	□□□□□ -1.85
TRM1	YDR120C	YNL208W	P40159	199 aa	Known RBP	3.48	□□□□□ -1.85
TRM1	YDR120C	GAB1	P41733	394 aa		3.48	□□□□□ -1.85
TRM1	YDR120C	ARP5	P53946	755 aa		3.48	□□□□□ -1.85
TRM1	YDR120C	REX2	P54964	269 aa	Known RBP	3.48	□□□□□ -1.85
TRM1	YDR120C	NAT4	Q04751	285 aa		3.48	□□□□□ -1.85
TRM1	YDR120C	YHC1	Q05900	231 aa	Known RBP	3.48	□□□□□ -1.85
TRM1	YDR120C	APC5	Q08683	685 aa		3.48	□□□□□ -1.85
TRM1	YDR120C	CCH1	P50077	2039 aa		3.48	□□□□□ -1.85
TRM1	YDR120C	YLR422W	Q06409	1932 aa		3.48	□□□□□ -1.85
TRM1	YDR120C	RPS18A	P0CX55	146 aa	Known RBP	3.47	□□□□□ -1.85
TRM1	YDR120C	RPS18B	P0CX56	146 aa	Predicted RBP	3.47	□□□□□ -1.85
TRM1	YDR120C	AAT2	P23542	418 aa	Known RBP	3.47	□□□□□ -1.85
TRM1	YDR120C	RSA4	P25382	515 aa	Known RBP	3.47	□□□□□ -1.85
TRM1	YDR120C	RPL16A	P26784	199 aa	Known RBP	3.47	□□□□□ -1.85
TRM1	YDR120C	OPY1	P38271	328 aa		3.47	□□□□□ -1.85
TRM1	YDR120C	OXA1	P39952	402 aa		3.47	□□□□□ -1.85
TRM1	YDR120C	YER186C	P40101	306 aa		3.47	□□□□□ -1.85
TRM1	YDR120C	PRE5	P40302	234 aa	Known RBP	3.47	□□□□□ -1.85
TRM1	YDR120C	YGL114W	P53134	725 aa		3.47	□□□□□ -1.85
TRM1	YDR120C	YNL146W	P53906	100 aa		3.47	□□□□□ -1.85
TRM1	YDR120C	YET2	Q04210	160 aa		3.47	□□□□□ -1.85
TRM1	YDR120C	YMR027W	Q04371	470 aa		3.47	□□□□□ -1.85
TRM1	YDR120C	DNL4	Q08387	944 aa	Predicted RBP	3.47	□□□□□ -1.85
TRM1	YDR120C	RTC5	Q12108	567 aa	Known RBP	3.47	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms