RNA–Protein interactions for RNA: YDL115C

IWR1, Transcript of RNA polymerase II transport factor, conserved from yeast to humans, yeast

Gene IWR1, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IWR1	YDL115C	YLR126C	Q12288	251 aa		4.69	□□□□□ -1.66
IWR1	YDL115C	TRM10	Q12400	293 aa		4.69	□□□□□ -1.66
IWR1	YDL115C	YOL163W	P0CF20	169 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	THR1	P17423	357 aa	Known RBP	4.68	□□□□□ -1.66
IWR1	YDL115C	APN1	P22936	367 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	URE2	P23202	354 aa	Known RBP	4.68	□□□□□ -1.66
IWR1	YDL115C	RHB1	P25378	209 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
IWR1	YDL115C	YMC1	P32331	307 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	TUL1	P36096	758 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	MRPL15	P36523	253 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	FES1	P38260	290 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	RPS20	P38701	121 aa	Known RBP	4.68	□□□□□ -1.66
IWR1	YDL115C	PEX18	P38855	283 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	AST2	P39945	430 aa	Known RBP	4.68	□□□□□ -1.66
IWR1	YDL115C	AVT6	P40074	448 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	DDI1	P40087	428 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	BUR6	P40096	142 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	RRG9	P40156	214 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	YIL166C	P40445	542 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	NIT2	P47016	307 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	MDE1	P47095	244 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	COX18	P53239	316 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	ATG4	P53867	494 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	ABZ2	Q03266	374 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	YDR179W-A	Q03983	463 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	URC2	Q04411	772 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	RGC1	Q06108	1083 aa	Known RBP	4.68	□□□□□ -1.66
IWR1	YDL115C	VPS36	Q06696	566 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	MSH5	Q12175	901 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	NFI1	Q12216	726 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	RKM5	Q12367	367 aa		4.68	□□□□□ -1.66
IWR1	YDL115C	CBS1	P14066	229 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	AAC3	P18238	307 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	MCK1	P21965	375 aa	Known RBP	4.67	□□□□□ -1.66
IWR1	YDL115C	IMG1	P25626	169 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	YIM1	P28625	365 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	YPT7	P32939	208 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	PPZ2	P33329	710 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	TAF14	P35189	244 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	FMP23	P38231	175 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	ARN2	P38724	620 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	WSC4	P38739	605 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	MDM31	P38880	579 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	SOP4	P39543	234 aa	Predicted RBP	4.67	□□□□□ -1.66
IWR1	YDL115C	YPS6	P40583	537 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	HMS2	P47175	358 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	HOS2	P53096	452 aa	Predicted RBP	4.67	□□□□□ -1.66
IWR1	YDL115C	MPC1	P53157	130 aa	Known RBP	4.67	□□□□□ -1.66
IWR1	YDL115C	SNF12	P53628	566 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	DBP6	P53734	629 aa	Known RBP	4.67	□□□□□ -1.66
IWR1	YDL115C	MTQ1	P53944	314 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	CIK1	Q01649	594 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	SNZ1	Q03148	297 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	RNH202	Q05635	350 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	STP3	Q05937	343 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	PST2	Q12335	198 aa	Known RBP	4.67	□□□□□ -1.66
IWR1	YDL115C	APC2	Q12440	853 aa		4.67	□□□□□ -1.66
IWR1	YDL115C	SNF6	P18888	332 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	ITR2	P30606	609 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	DAL3	P32459	195 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	UBS1	P38290	277 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	YHR035W	P38769	630 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	VPS52	P39904	641 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	RTT105	P40063	208 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	VRG4	P40107	337 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	EFM3	P47163	339 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	BAT2	P47176	376 aa	Known RBP	4.66	□□□□□ -1.66
IWR1	YDL115C	TRM9	P49957	279 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	CDH1	P53197	566 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	MNT4	P53745	580 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	COS1	P53822	381 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	CSL4	P53859	292 aa	Predicted RBP	4.66	□□□□□ -1.66
IWR1	YDL115C	NUP49	Q02199	472 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	YPL068C	Q02749	293 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	FIN1	Q03898	291 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	MGR3	Q04472	501 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	FMP42	Q04991	504 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	RSF1	Q05043	376 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	YLR345W	Q06137	509 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	YLR456W	Q06199	204 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	YLR446W	Q06204	433 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	MLC2	Q06580	163 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	MDM36	Q06820	579 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	FMP45	Q07651	309 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	YOR365C	Q08844	703 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	UIP4	Q08926	304 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	BSC1	Q12140	328 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	SKM1	Q12469	655 aa		4.66	□□□□□ -1.66
IWR1	YDL115C	RPS21B	Q3E754	87 aa	Known RBP	4.66	□□□□□ -1.66
IWR1	YDL115C	SLH1	P53327	1967 aa	Known RBP	4.65	□□□□□ -1.66
IWR1	YDL115C	BEM2	P39960	2167 aa	Known RBP	4.65	□□□□□ -1.66
IWR1	YDL115C	YGL041W-A	P0C5N3	154 aa		4.65	□□□□□ -1.67
IWR1	YDL115C	RPL1A	P0CX43	217 aa	Known RBP	4.65	□□□□□ -1.67
IWR1	YDL115C	RPL1B	P0CX44	217 aa	Known RBP	4.65	□□□□□ -1.67
IWR1	YDL115C	PRP2	P20095	876 aa	Predicted RBP	4.65	□□□□□ -1.67
IWR1	YDL115C	PRP28	P23394	588 aa		4.65	□□□□□ -1.67
IWR1	YDL115C	CHA1	P25379	360 aa	Known RBP	4.65	□□□□□ -1.67
IWR1	YDL115C	OAC1	P32332	324 aa		4.65	□□□□□ -1.67
IWR1	YDL115C	GSH1	P32477	678 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 309 ms