RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C MLH1P38920 769 aa1.64□□□□□ -2.15
ASM4YDL088C PCL7P40186 285 aa1.64□□□□□ -2.15
ASM4YDL088C MEP1P40260 492 aa1.64□□□□□ -2.15
ASM4YDL088C NAS2P40555 220 aa1.64□□□□□ -2.15
ASM4YDL088C EFM3P47163 339 aa1.64□□□□□ -2.15
ASM4YDL088C SHE4P51534 789 aa1.64□□□□□ -2.15
ASM4YDL088C NRM1P53718 249 aa1.64□□□□□ -2.15
ASM4YDL088C YNR068CP53754 272 aa1.64□□□□□ -2.15
ASM4YDL088C FRE8Q12209 686 aa1.64□□□□□ -2.15
ASM4YDL088C PSY3Q12318 242 aa1.64□□□□□ -2.15
ASM4YDL088C FAA1P30624 700 aaKnown RBP1.64□□□□□ -2.15
ASM4YDL088C YDR089WP38966 869 aa1.64□□□□□ -2.15
ASM4YDL088C LYS12P40495 371 aaKnown RBP1.64□□□□□ -2.15
ASM4YDL088C YIL089WP40500 205 aa1.64□□□□□ -2.15
ASM4YDL088C EPL1P43572 832 aa1.64□□□□□ -2.15
ASM4YDL088C RPA34P47006 233 aaPredicted RBP1.64□□□□□ -2.15
ASM4YDL088C TRM82Q03774 444 aa1.64□□□□□ -2.15
ASM4YDL088C YOL075CQ08234 1294 aa1.64□□□□□ -2.15
ASM4YDL088C TAL1P15019 335 aaKnown RBP1.63□□□□□ -2.15
ASM4YDL088C HPR1P17629 752 aaKnown RBP1.63□□□□□ -2.15
ASM4YDL088C UBA1P22515 1024 aaKnown RBP1.63□□□□□ -2.15
ASM4YDL088C RDS1P25611 832 aa1.63□□□□□ -2.15
ASM4YDL088C SUR1P33300 382 aa1.63□□□□□ -2.15
ASM4YDL088C PCH2P38126 564 aa1.63□□□□□ -2.15
ASM4YDL088C YPT35P38815 214 aaKnown RBP1.63□□□□□ -2.15
ASM4YDL088C RTT105P40063 208 aa1.63□□□□□ -2.15
ASM4YDL088C YGL088WP53151 121 aa1.63□□□□□ -2.15
ASM4YDL088C ERV25P54837 211 aaKnown RBP1.63□□□□□ -2.15
ASM4YDL088C PRO2P54885 456 aaKnown RBP1.63□□□□□ -2.15
ASM4YDL088C MIX17Q03667 156 aa1.63□□□□□ -2.15
ASM4YDL088C INP1Q03694 420 aa1.63□□□□□ -2.15
ASM4YDL088C SLM3Q12093 417 aa1.63□□□□□ -2.15
ASM4YDL088C DAP2P18962 818 aa1.62□□□□□ -2.15
ASM4YDL088C MIG1P27705 504 aa1.62□□□□□ -2.15
ASM4YDL088C YBL028CP38202 106 aa1.62□□□□□ -2.15
ASM4YDL088C VPS45P38932 577 aa1.62□□□□□ -2.15
ASM4YDL088C LOC1P43586 204 aaPredicted RBP1.62□□□□□ -2.15
ASM4YDL088C YFR018CP43599 363 aa1.62□□□□□ -2.15
ASM4YDL088C CUE3P53137 624 aaKnown RBP1.62□□□□□ -2.15
ASM4YDL088C AQR1P53943 586 aa1.62□□□□□ -2.15
ASM4YDL088C SUR7P54003 302 aa1.62□□□□□ -2.15
ASM4YDL088C SPH1Q06160 661 aa1.62□□□□□ -2.15
ASM4YDL088C ARR1Q06596 294 aa1.62□□□□□ -2.15
ASM4YDL088C RLP24Q07915 199 aaKnown RBP1.62□□□□□ -2.15
ASM4YDL088C PML1Q07930 204 aaPredicted RBP1.62□□□□□ -2.15
ASM4YDL088C YDR018CQ12185 396 aa1.62□□□□□ -2.15
ASM4YDL088C MDY2Q12285 212 aa1.62□□□□□ -2.15
ASM4YDL088C YIL002W-AQ3E7Z5 69 aa1.62□□□□□ -2.15
ASM4YDL088C VPS63O13549 108 aa1.61□□□□□ -2.15
ASM4YDL088C GCD2P12754 651 aaPredicted RBP1.61□□□□□ -2.15
ASM4YDL088C DBP3P20447 523 aaKnown RBP1.61□□□□□ -2.15
ASM4YDL088C EFB1P32471 206 aaKnown RBP1.61□□□□□ -2.15
ASM4YDL088C MRPL40P36534 297 aa1.61□□□□□ -2.15
ASM4YDL088C SSO2P39926 295 aa1.61□□□□□ -2.15
ASM4YDL088C YNL320WP42840 284 aa1.61□□□□□ -2.15
ASM4YDL088C YNL143CP53908 130 aa1.61□□□□□ -2.15
ASM4YDL088C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.61□□□□□ -2.15not detected
ASM4YDL088C EGD1Q02642 157 aaKnown RBP1.61□□□□□ -2.15
ASM4YDL088C SCS7Q03529 384 aa1.61□□□□□ -2.15
ASM4YDL088C YMR244WQ04018 355 aa1.61□□□□□ -2.15
ASM4YDL088C YMR111CQ04461 462 aaPredicted RBP1.61□□□□□ -2.15
ASM4YDL088C PRP46Q12417 451 aaPredicted RBP1.61□□□□□ -2.15
ASM4YDL088C RRP36Q12481 300 aaPredicted RBP1.61□□□□□ -2.15
ASM4YDL088C CBP2P03874 630 aaPredicted RBP1.6□□□□□ -2.15
ASM4YDL088C RNR2P09938 399 aaKnown RBP1.6□□□□□ -2.15
ASM4YDL088C PET18P25362 215 aa1.6□□□□□ -2.15
ASM4YDL088C RIB7P33312 244 aa1.6□□□□□ -2.15
ASM4YDL088C YKR032WP36127 104 aa1.6□□□□□ -2.15
ASM4YDL088C OSW5P40219 148 aa1.6□□□□□ -2.15
ASM4YDL088C YIL054WP40524 105 aa1.6□□□□□ -2.15
ASM4YDL088C BUD13P46947 266 aaPredicted RBP1.6□□□□□ -2.15
ASM4YDL088C MPS2P53159 387 aa1.6□□□□□ -2.15
ASM4YDL088C RGM1Q00453 211 aa1.6□□□□□ -2.15
ASM4YDL088C YPL113CQ02961 396 aa1.6□□□□□ -2.15
ASM4YDL088C VPS20Q04272 221 aa1.6□□□□□ -2.15
ASM4YDL088C ALE1Q08548 619 aa1.6□□□□□ -2.15
ASM4YDL088C SFG1Q12507 346 aa1.6□□□□□ -2.15
ASM4YDL088C CDC37P06101 506 aaKnown RBP1.59□□□□□ -2.15
ASM4YDL088C THR4P16120 514 aaKnown RBP1.59□□□□□ -2.15
ASM4YDL088C ITR2P30606 609 aa1.59□□□□□ -2.15
ASM4YDL088C HMX1P32339 317 aa1.59□□□□□ -2.15
ASM4YDL088C VAM7P32912 316 aa1.59□□□□□ -2.15
ASM4YDL088C ZRT3P34240 503 aa1.59□□□□□ -2.15
ASM4YDL088C LIN1P38852 340 aaPredicted RBP1.59□□□□□ -2.15
ASM4YDL088C SPT8P38915 602 aa1.59□□□□□ -2.15
ASM4YDL088C UTP6Q02354 440 aaKnown RBP1.59□□□□□ -2.15
ASM4YDL088C YDR114CQ04597 100 aa1.59□□□□□ -2.15
ASM4YDL088C CDD1Q06549 142 aa1.59□□□□□ -2.15
ASM4YDL088C YPR078CQ06813 372 aa1.59□□□□□ -2.15
ASM4YDL088C YPR063CQ12160 140 aa1.59□□□□□ -2.15
ASM4YDL088C OM45P16547 393 aa1.59□□□□□ -2.16
ASM4YDL088C GRR1P24814 1151 aa1.59□□□□□ -2.16
ASM4YDL088C PSO2P30620 661 aa1.59□□□□□ -2.16
ASM4YDL088C MSK1P32048 576 aa1.59□□□□□ -2.16
ASM4YDL088C YHR122WP38829 231 aa1.59□□□□□ -2.16
ASM4YDL088C PET100P38958 111 aa1.59□□□□□ -2.16
ASM4YDL088C MNN9P39107 395 aaKnown RBP1.59□□□□□ -2.16
ASM4YDL088C SNL1P40548 159 aa1.59□□□□□ -2.16
ASM4YDL088C CAX4P53223 239 aa1.59□□□□□ -2.16
ASM4YDL088C YLR297WQ05899 129 aa1.59□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms