RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 NSUN3Q9H649 340 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-259ENST00000638114 UBE2ZQ9H832 354 aaPredicted RBP18.71■□□□□ 0.59
CACNA1A-259ENST00000638114 DACT1Q9NYF0 836 aa18.71■□□□□ 0.59
CACNA1A-259ENST00000638114 PLAGL2Q9UPG8 496 aa18.71■□□□□ 0.59
CACNA1A-259ENST00000638114 TCF20Q9UGU0 1960 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 HOXA2O43364 376 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 GAS2O43903 313 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 LYPLA2O95372 231 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 BMP1P13497 986 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 NAALADL2Q58DX5 795 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 TTC38Q5R3I4 469 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 CATSPER4Q7RTX7 472 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 ABI1Q8IZP0 508 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 KLHL23Q8NBE8 558 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 TCP11Q8WWU5 503 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 PRPF31Q8WWY3 499 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 UHRF1Q96T88 793 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 MTRQ99707 1265 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 TMEM117Q9H0C3 514 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 HCSTQ9UBK5 93 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 NOL7Q9UMY1 257 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 PIN4Q9Y237 131 aaKnown RBP18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 KIF3AQ9Y496 699 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 ATG2AQ2TAZ0 1938 aa18.7■□□□□ 0.58
CACNA1A-259ENST00000638114 ITGB1P05556 798 aa18.69■□□□□ 0.58
CACNA1A-259ENST00000638114 OR52Z1P0C646 297 aa18.69■□□□□ 0.58
CACNA1A-259ENST00000638114 SRGAP2CP0DJJ0 459 aa18.69■□□□□ 0.58
CACNA1A-259ENST00000638114 LAMTOR4Q0VGL1 99 aa18.69■□□□□ 0.58
CACNA1A-259ENST00000638114 ORC2Q13416 577 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-259ENST00000638114 TMX3Q96JJ7 454 aa18.69■□□□□ 0.58
CACNA1A-259ENST00000638114 CHST12Q9NRB3 414 aa18.69■□□□□ 0.58
CACNA1A-259ENST00000638114 AAASQ9NRG9 546 aa18.69■□□□□ 0.58
CACNA1A-259ENST00000638114 ANKEF1Q9NU02 776 aa18.69■□□□□ 0.58
CACNA1A-259ENST00000638114 TYW1Q9NV66 732 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-259ENST00000638114 PCDHB12Q9Y5F1 795 aa18.69■□□□□ 0.58
CACNA1A-259ENST00000638114 A0A0U1RQF3 1178 aa18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 CD2BP2O95400 341 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 KCNA5P22460 613 aa18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 TECP42680 631 aa18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 TRAPPC10P48553 1259 aa18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 TWF2Q6IBS0 349 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 EP400NLQ6ZTU2 488 aa18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 SPPL3Q8TCT6 385 aa18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 PIGOQ8TEQ8 1089 aa18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 TBC1D32Q96NH3 1257 aa18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 IFT122Q9HBG6 1241 aa18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 RNF19AQ9NV58 838 aa18.68■□□□□ 0.58
CACNA1A-259ENST00000638114 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 ASAP2O43150 1006 aa18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 DNAJB1P25685 340 aa18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 NBR1Q14596 966 aa18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 SRGAP1Q7Z6B7 1085 aa18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 FERMT3Q86UX7 667 aa18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 COLGALT1Q8NBJ5 622 aa18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 RNF149Q8NC42 400 aa18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 POF1BQ8WVV4 589 aa18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 NECAB3Q96P71 396 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 CASD1Q96PB1 797 aa18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 TUFT1Q9NNX1 390 aa18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 XPNPEP1Q9NQW7 623 aa18.67■□□□□ 0.58
CACNA1A-259ENST00000638114 A0A087WWV3 80 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 TNFRSF10AO00220 468 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 DGAT1O75907 488 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 EOMESO95936 686 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 SPATA31C1P0DKV0 1188 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 ATF7P17544 494 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 LAG3P18627 525 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 U2AF2P26368 475 aaKnown RBP eCLIP18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 PHKA2P46019 1235 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 MCM2P49736 904 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 RARRES1P49788 294 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 CAMK1Q14012 370 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 CLLU1OSQ5K130 101 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 ZNF598Q86UK7 904 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 CATSPER3Q86XQ3 398 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 THNSL1Q8IYQ7 743 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 LRRC43Q8N309 656 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 ERMNQ8TAM6 284 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 HELQQ8TDG4 1101 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 CWH43Q9H720 699 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 MINDY3Q9H8M7 445 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 NCOR1O75376 2440 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 PLXNA4Q9HCM2 1894 aa18.66■□□□□ 0.58
CACNA1A-259ENST00000638114 USO1O60763 962 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 MED24O75448 989 aa18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 FGF18O76093 207 aa18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 SKIP12755 728 aa18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 MXD4Q14582 209 aaPredicted RBP18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 CSPP1Q1MSJ5 1256 aa18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 MCTP1Q6DN14 999 aa18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 LRRC55Q6ZSA7 311 aa18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 PABPC5Q96DU9 382 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 TRAIPQ9BWF2 469 aa18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 AGPAT5Q9NUQ2 364 aa18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 CLDND1Q9NY35 253 aa18.65■□□□□ 0.58
CACNA1A-259ENST00000638114 H3BQ06 376 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 XRCC6P12956 609 aaKnown RBP eCLIP18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 GJB2P29033 226 aa18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 IRS1P35568 1242 aa18.64■□□□□ 0.57
CACNA1A-259ENST00000638114 RAB27AP51159 221 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms