RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 SYT1P21579 422 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 PRPHP41219 470 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 ATP2C1P98194 919 aaPredicted RBP16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 PDIA5Q14554 519 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 MXD4Q14582 209 aaPredicted RBP16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 ABI1Q8IZP0 508 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 SPRYD3Q8NCJ5 442 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 SNX21Q969T3 373 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 SAMD11Q96NU1 681 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 POLR3FQ9H1D9 316 aaPredicted RBP16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 DDX19AQ9NUU7 478 aaKnown RBP16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 DACT1Q9NYF0 836 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 KIAA1024Q9UPX6 916 aa16.02■□□□□ 0.16
CACNA1A-249ENST00000637777 LRRIQ4A6NIV6 560 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 TBKBP1A7MCY6 615 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 DGKIO75912 1065 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 CSPG5O95196 566 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 BMP15O95972 392 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 GATMP50440 423 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 ERVK-21P61565 698 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 ADGRE1Q14246 886 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 TMEM132AQ24JP5 1023 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 SLC17A8Q8NDX2 589 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 MCPH1Q8NEM0 835 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 DBR1Q9UK59 544 aaKnown RBP16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 COL6A3P12111 3177 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 CHD9Q3L8U1 2897 aa16.01■□□□□ 0.15
CACNA1A-249ENST00000637777 RALGAPA2Q2PPJ7 1873 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 INO80B-WBP1J3KQ70 363 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 STX6O43752 255 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 SSBP05455 408 aaKnown RBP eCLIP16■□□□□ 0.15
CACNA1A-249ENST00000637777 MUTP22033 750 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 CDC25AP30304 524 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 NCBP1Q09161 790 aaKnown RBP16■□□□□ 0.15
CACNA1A-249ENST00000637777 GRB10Q13322 594 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 EPC2Q52LR7 807 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 PADI6Q6TGC4 694 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 FAM43BQ6ZT52 329 aaPredicted RBP16■□□□□ 0.15
CACNA1A-249ENST00000637777 SRGAP1Q7Z6B7 1085 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 TMEM192Q8IY95 271 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 IGSF22Q8N9C0 903 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 BHMT2Q9H2M3 363 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 XPNPEP1Q9NQW7 623 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 DNM3Q9UQ16 869 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 RWDD3Q9Y3V2 267 aa16■□□□□ 0.15
CACNA1A-249ENST00000637777 C9IYK1 514 aa15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 HOXA2O43364 376 aa15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 FGFR1P11362 822 aa15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 LIG1P18858 919 aa15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 CEBPZQ03701 1054 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 GPM6BQ13491 265 aa15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 SF3A1Q15459 793 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 FOXD4L5Q5VV16 416 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 ARL6IP4Q66PJ3 421 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 CMTR2Q8IYT2 770 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 ASAP3Q8TDY4 903 aa15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 FOXD4L4Q8WXT5 416 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 PLIN2Q99541 437 aa15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 IFT122Q9HBG6 1241 aa15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 GPRC5CQ9NQ84 441 aa15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 TMEM161AQ9NX61 479 aa15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 CHD7Q9P2D1 2997 aa15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 PRRC2BQ5JSZ5 2229 aaKnown RBP15.99■□□□□ 0.15
CACNA1A-249ENST00000637777 UBA7P41226 1012 aa15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 CAPSQ13938 189 aa15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 DSC3Q14574 896 aa15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 IL17AQ16552 155 aa15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 ECM1Q16610 540 aa15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 PTPROQ16827 1216 aa15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 LONRF3Q496Y0 759 aa15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 ECHDC2Q86YB7 292 aa15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 ZBTB8OSQ8IWT0 167 aa15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 IFT74Q96LB3 600 aa15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 C11orf84Q9BUA3 381 aaPredicted RBP15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 CHST12Q9NRB3 414 aa15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 MRPL42Q9Y6G3 142 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-249ENST00000637777 FNDC1Q4ZHG4 1894 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 E9PMD0 336 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 SKIP12755 728 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 GLRA2P23416 452 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 RESTQ13127 1097 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 FAM173BQ6P4H8 233 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 CABP7Q86V35 215 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 ZNF689Q96CS4 500 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 CALML4Q96GE6 196 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 TRIM6Q9C030 488 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 NT5C3AQ9H0P0 336 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 ELAC1Q9H777 363 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 MINDY3Q9H8M7 445 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 AAASQ9NRG9 546 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 AGPAT5Q9NUQ2 364 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 MTMR6Q9Y217 621 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 MTCH2Q9Y6C9 303 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 COL4A6Q14031 1691 aa15.97■□□□□ 0.15
CACNA1A-249ENST00000637777 KIAA1671Q9BY89 1806 aa15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 CYP11B2P19099 503 aa15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 ARL2P36404 184 aa15.96■□□□□ 0.15
CACNA1A-249ENST00000637777 RAB27AP51159 221 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms