RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 DGAT1O75907 488 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 CD52P31358 61 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 TXLNAP40222 546 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 UBE2HP62256 183 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 CNNM3Q8NE01 707 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 CPB2Q96IY4 423 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 CXCL16Q9H2A7 254 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 COL4A3BPQ9Y5P4 624 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 PTPRSQ13332 1948 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 LRRIQ4A6NIV6 560 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 BIN1O00499 593 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 KLRC4O43908 158 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 MGEA5O60502 916 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 SLFN14P0C7P3 912 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 FAM160A1Q05DH4 1040 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 PTK7Q13308 1070 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 CCDC73Q6ZRK6 1079 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 IQUBQ8NA54 791 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 ZSWIM2Q8NEG5 633 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 EEF2KMTQ96G04 330 aa9.45□□□□□ -0.9
CDKL5-209ENST00000635828 TRIOBPQ9H2D6 2365 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 SMIM35A0A1B0GVV1 85 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 RRN3P2A6NIE6 340 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 RAG1P15918 1043 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 LPIN1Q14693 890 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 SV2BQ7L1I2 683 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 LRRC8DQ7L1W4 858 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 OTOP2Q7RTS6 562 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 SFR1Q86XK3 245 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 TOX2Q96NM4 488 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 MEIS3P2A8K0S8 358 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 MYBP10242 640 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 BMP6P22004 513 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 NPTX2P47972 431 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 NFX1Q12986 1120 aaKnown RBP9.44□□□□□ -0.9
CDKL5-209ENST00000635828 C9orf50Q5SZB4 431 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-209ENST00000635828 CCDC169A6NNP5 214 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 MRPS6P82932 125 aaKnown RBP9.44□□□□□ -0.9
CDKL5-209ENST00000635828 SEZ6Q53EL9 994 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 RTN4RL1Q86UN2 441 aaPredicted RBP9.44□□□□□ -0.9
CDKL5-209ENST00000635828 FAM228AQ86W67 206 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 GBP4Q96PP9 640 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 TMX1Q9H3N1 280 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 SLC39A2Q9NP94 309 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 TMEM63CQ9P1W3 806 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 GDAQ9Y2T3 454 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 COL1A2P08123 1366 aa9.44□□□□□ -0.9
CDKL5-209ENST00000635828 TIMP1P01033 207 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 KRT18P05783 430 aaKnown RBP9.43□□□□□ -0.9
CDKL5-209ENST00000635828 STK4Q13043 487 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 NFKBIBQ15653 356 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 FAM109BQ6ICB4 259 aaPredicted RBP9.43□□□□□ -0.9
CDKL5-209ENST00000635828 MYCT1Q8N699 235 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 DBF4BQ8NFT6 615 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 SCLT1Q96NL6 688 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 CELF4Q9BZC1 486 aaKnown RBP9.43□□□□□ -0.9
CDKL5-209ENST00000635828 GNAT1P11488 350 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 XRCC6P12956 609 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDKL5-209ENST00000635828 HOXD13P35453 343 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 MAGEA10P43363 369 aaPredicted RBP9.43□□□□□ -0.9
CDKL5-209ENST00000635828 ASIC1P78348 528 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 ODR4Q5SWX8 454 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 PSPC1Q8WXF1 523 aaKnown RBP9.43□□□□□ -0.9
CDKL5-209ENST00000635828 LINC01599Q8WXQ3 324 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 ZBTB45Q96K62 511 aaPredicted RBP9.43□□□□□ -0.9
CDKL5-209ENST00000635828 HAPLN2Q9GZV7 340 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 PCDHA5Q9Y5H7 936 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 AFF1P51825 1210 aaKnown RBP9.43□□□□□ -0.9
CDKL5-209ENST00000635828 DPYDQ12882 1025 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 FBXO47Q5MNV8 452 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDKL5-209ENST00000635828 CEP57L1Q8IYX8 460 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 KIAA0895Q8NCT3 520 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 FAM84AQ96KN4 292 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 STK17AQ9UEE5 414 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 PADI3Q9ULW8 664 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 HES2Q9Y543 173 aa9.43□□□□□ -0.9
CDKL5-209ENST00000635828 MROH7Q68CQ1 1323 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 KIAA0355O15063 1070 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 GUCY2CP25092 1073 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 COASYQ13057 564 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 KMT5BQ4FZB7 885 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 SPRED2Q7Z698 418 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 PANK4Q9NVE7 773 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 INO80B-WBP1J3KQ70 363 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 MAGEB2O15479 319 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 SELPP16109 830 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 RFC5P40937 340 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 RGS19P49795 217 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 MBTD1Q05BQ5 628 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 PTPN11Q06124 597 aaPredicted RBP9.42□□□□□ -0.9
CDKL5-209ENST00000635828 POSTNQ15063 836 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 AMHR2Q16671 573 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 HERC4Q5GLZ8 1057 aaPredicted RBP9.42□□□□□ -0.9
CDKL5-209ENST00000635828 TAF2Q6P1X5 1199 aa9.42□□□□□ -0.9
CDKL5-209ENST00000635828 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.42□□□□□ -0.9
CDKL5-209ENST00000635828 INO80BQ9C086 356 aaPredicted RBP9.42□□□□□ -0.9
CDKL5-209ENST00000635828 HCSTQ9UBK5 93 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms