RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 PCDHA7Q9UN72 937 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 UBIAD1Q9Y5Z9 338 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 CDY2AQ9Y6F7 541 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 DENND4AQ7Z401 1863 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 IGLV3-22A0A075B6J6 115 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 DGKIO75912 1065 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 GNAT1P11488 350 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 ITGB5P18084 799 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 AVPR2P30518 371 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 FXR2P51116 673 aaKnown RBP eCLIP10.32□□□□□ -0.76
SYN3-213ENST00000619146 MTMR1Q13613 665 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 FAM26DQ5JW98 314 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 AXDND1Q5T1B0 1012 aaPredicted RBP10.32□□□□□ -0.76
SYN3-213ENST00000619146 SPOUT1Q5T280 376 aaKnown RBP10.32□□□□□ -0.76
SYN3-213ENST00000619146 LLGL2Q6P1M3 1020 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 ZBTB33Q86T24 672 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 RTN4RL1Q86UN2 441 aaPredicted RBP10.32□□□□□ -0.76
SYN3-213ENST00000619146 POTEDQ86YR6 584 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 SMRP1Q8NCR6 262 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 VN1R2Q8NFZ6 395 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 CLP1Q92989 425 aaKnown RBP10.32□□□□□ -0.76
SYN3-213ENST00000619146 LENG9Q96B70 501 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 ZNF689Q96CS4 500 aaPredicted RBP10.32□□□□□ -0.76
SYN3-213ENST00000619146 GPRASP2Q96D09 838 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 TMEM60Q9H2L4 133 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 SMOC2Q9H3U7 446 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 TLE6Q9H808 572 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 FAM13BQ9NYF5 915 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 PCDHA12Q9UN75 941 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 RWDD3Q9Y3V2 267 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 STK24Q9Y6E0 443 aa10.32□□□□□ -0.76
SYN3-213ENST00000619146 VWA3AA6NCI4 1184 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 EYA4O95677 639 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 TXLNAP40222 546 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 ADAM17P78536 824 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 SIGLEC14Q08ET2 396 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 MGAT3Q09327 533 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 PDIA5Q14554 519 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 FBXO47Q5MNV8 452 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 CCDC73Q6ZRK6 1079 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 ASCL5Q7RTU5 278 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 EFHBQ8N7U6 833 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 CYP2W1Q8TAV3 490 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 ETNPPLQ8TBG4 499 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 MRPS27Q92552 414 aaKnown RBP10.31□□□□□ -0.76
SYN3-213ENST00000619146 HAS1Q92839 578 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 SLC5A5Q92911 643 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 ASIC4Q96FT7 647 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 INPP4AQ96PE3 977 aaPredicted RBP10.31□□□□□ -0.76
SYN3-213ENST00000619146 RIT2Q99578 217 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 PYM1Q9BRP8 204 aaKnown RBP10.31□□□□□ -0.76
SYN3-213ENST00000619146 ZNF577Q9BSK1 485 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 TTC12Q9H892 705 aaPredicted RBP10.31□□□□□ -0.76
SYN3-213ENST00000619146 ZNF215Q9UL58 517 aaPredicted RBP10.31□□□□□ -0.76
SYN3-213ENST00000619146 CACNA1BQ00975 2339 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 MIA3Q5JRA6 1907 aa10.31□□□□□ -0.76
SYN3-213ENST00000619146 FANCMQ8IYD8 2048 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 FAM237AA0A1B0GTK4 181 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 SPATA31C2B4DYI2 1134 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 IPO5O00410 1097 aaKnown RBP10.3□□□□□ -0.76
SYN3-213ENST00000619146 MSH4O15457 936 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 SLC26A4O43511 780 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 TRAK2O60296 914 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 GAS7O60861 476 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 CAND2O75155 1236 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 GADD45BO75293 160 aaPredicted RBP10.3□□□□□ -0.76
SYN3-213ENST00000619146 TGFB3P10600 412 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 TCF7P36402 384 aaPredicted RBP10.3□□□□□ -0.76
SYN3-213ENST00000619146 TXKP42681 527 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 COASYQ13057 564 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 PPFIA1Q13136 1202 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 GRIK4Q16099 956 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 KLHL40Q2TBA0 621 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 RESP18Q5W5W9 173 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 SHC4Q6S5L8 630 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 METTL7BQ6UX53 244 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 FSIP1Q8NA03 581 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 TRAPPC12Q8WVT3 735 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 PPP2R3CQ969Q6 453 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 SYAP1Q96A49 352 aaPredicted RBP10.3□□□□□ -0.76
SYN3-213ENST00000619146 PHF7Q9BWX1 381 aaPredicted RBP10.3□□□□□ -0.76
SYN3-213ENST00000619146 CSRNP2Q9H175 543 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 AGO4Q9HCK5 861 aaKnown RBP10.3□□□□□ -0.76
SYN3-213ENST00000619146 KCNH7Q9NS40 1196 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 TBC1D22BQ9NU19 505 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 TCEAL9Q9UHQ7 104 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 TUBE1Q9UJT0 475 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 SPTBN2O15020 2390 aa10.3□□□□□ -0.76
SYN3-213ENST00000619146 ATP9AO75110 1047 aa10.29□□□□□ -0.76
SYN3-213ENST00000619146 ARP10275 920 aa10.29□□□□□ -0.76
SYN3-213ENST00000619146 ICAM3P32942 547 aa10.29□□□□□ -0.76
SYN3-213ENST00000619146 UBA7P41226 1012 aa10.29□□□□□ -0.76
SYN3-213ENST00000619146 TECP42680 631 aa10.29□□□□□ -0.76
SYN3-213ENST00000619146 ERVFC1P60507 584 aa10.29□□□□□ -0.76
SYN3-213ENST00000619146 MRPS6P82932 125 aaKnown RBP10.29□□□□□ -0.76
SYN3-213ENST00000619146 FAM160A1Q05DH4 1040 aa10.29□□□□□ -0.76
SYN3-213ENST00000619146 NEDD9Q14511 834 aa10.29□□□□□ -0.76
SYN3-213ENST00000619146 CBX2Q14781 532 aaPredicted RBP10.29□□□□□ -0.76
SYN3-213ENST00000619146 IL17AQ16552 155 aa10.29□□□□□ -0.76
SYN3-213ENST00000619146 LRCH2Q5VUJ6 765 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms