RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 DENND2AQ9ULE3 1009 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 PRDM15P57071 1507 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 MYH1P12882 1939 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 MYH2Q9UKX2 1941 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 MYH4Q9Y623 1939 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 MED7O43513 233 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 SNX17Q15036 470 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 CCDC90BQ9GZT6 254 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 FBXO2Q9UK22 296 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 CFAP69A5D8W1 941 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 CFAP99D6REC4 459 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 MOCS3O95396 460 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 PAX7P23759 505 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 SLCO1A2P46721 670 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 COL23A1Q86Y22 540 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 C16orf71Q8IYS4 520 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 PIGOQ8TEQ8 1089 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 ZNF184Q99676 751 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 NCOA5Q9HCD5 579 aaKnown RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 PA2G4Q9UQ80 394 aaKnown RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 LPXNO60711 386 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 PPARGP37231 505 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 IL12RB1P42701 662 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 RAPH1Q70E73 1250 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 MIGA1Q8NAN2 632 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 ZBTB9Q96C00 473 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 PSMC3P17980 439 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 GYS2P54840 703 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 DMP1Q13316 513 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 KYNUQ16719 465 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 TTC33Q6PID6 262 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 G3BP2Q9UN86 482 aaKnown RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 CFLARO15519 480 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 CHN1P15882 459 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 DDR1Q08345 913 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 FMNL1O95466 1100 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 BTNL9Q6UXG8 535 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 MAGEB18Q96M61 343 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 KCND1Q9NSA2 647 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 SLC13A4Q9UKG4 626 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 ZNF233A6NK53 670 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 RGS20O76081 388 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 DLG4P78352 724 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 PKP1Q13835 747 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 ATL2Q8NHH9 583 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 POMGNT1Q8WZA1 660 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 LENG1Q96BZ8 264 aaPredicted RBP9.32□□□□□ -0.92
TTC28-208ENST00000612946 MTERF3Q96E29 417 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 TSSK1BQ9BXA7 367 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 C8orf4Q9NR00 106 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 KLHL20Q9Y2M5 609 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 KDRP35968 1356 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 PLEKHG1Q9ULL1 1385 aa9.32□□□□□ -0.92
TTC28-208ENST00000612946 TRIP10Q15642 601 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 ZBED2Q9BTP6 218 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 ZCCHC17Q9NP64 241 aaKnown RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 FBXO28Q9NVF7 368 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 USP19O94966 1318 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 ABCA8O94911 1581 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 CALB1P05937 261 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 CCDC166P0CW27 439 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 GCLCP48506 637 aaPredicted RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 CAVIN3Q969G5 261 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 GPBP1L1Q9HC44 474 aaPredicted RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 MCM9Q9NXL9 1143 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 FAM153AQ9UHL3 310 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 SRPRBQ9Y5M8 271 aaKnown RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 GSPT1P15170 499 aaKnown RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 DGCR14Q96DF8 476 aaKnown RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 CDHR2Q9BYE9 1310 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 ORC4O43929 436 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 OCM2P0CE71 109 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 OCMP0CE72 109 aaPredicted RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 PSMC2P35998 433 aaKnown RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 RUNDC3AQ59EK9 446 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 C8orf58Q8NAV2 365 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 MAP4K1Q92918 833 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 ERP27Q96DN0 273 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 PSMC3IPQ9P2W1 217 aaPredicted RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 SPATA31E1Q6ZUB1 1445 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 LSM1O15116 133 aaKnown RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 PALMO75781 387 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 PPP6R3Q5H9R7 873 aaPredicted RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 HPS3Q969F9 1004 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 NT5C1BQ96P26 610 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 PPP1R2P1Q96PQ5 205 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 TRABDQ9H4I3 376 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 ARPP21Q9UBL0 812 aaPredicted RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 SERPINB12Q96P63 405 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 SH3GLB2Q9NR46 395 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 TBK1Q9UHD2 729 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 FBXL5Q9UKA1 691 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 V9GY48 417 aaPredicted RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 MSL3P1P0C860 447 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 CLK1P49759 484 aaKnown RBP9.31□□□□□ -0.92
TTC28-208ENST00000612946 RCN1Q15293 331 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 OTUD6AQ7L8S5 288 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 EMC3Q9P0I2 261 aa9.31□□□□□ -0.92
TTC28-208ENST00000612946 MYH7BA7E2Y1 1941 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms