RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 PAK1Q13153 545 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 BMT2Q1RMZ1 405 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 ZCWPW2Q504Y3 356 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 FAM178BQ8IXR5 827 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 TMEM161BQ8NDZ6 487 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 PRPF31Q8WWY3 499 aaKnown RBP12.75□□□□□ -0.37
CTCFL-221ENST00000608903 KIFAP3Q92845 792 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 P2RX5Q93086 422 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 ZNF668Q96K58 619 aaPredicted RBP12.75□□□□□ -0.37
CTCFL-221ENST00000608903 NAT10Q9H0A0 1025 aaKnown RBP12.75□□□□□ -0.37
CTCFL-221ENST00000608903 PPME1Q9Y570 386 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 COL1A2P08123 1366 aa12.75□□□□□ -0.37
CTCFL-221ENST00000608903 IKBKBO14920 756 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 TGFB1I1O43294 461 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 HOXC8P31273 242 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 RTP1P59025 263 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 MYL5Q02045 173 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 CAPSQ13938 189 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 NBPF20Q3BBV1 942 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 HSP90AA4PQ58FG1 418 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 CT47A1Q5JQC4 288 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-221ENST00000608903 RUFY4Q6ZNE9 571 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 IRF2BP1Q8IU81 584 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 SPIRE2Q8WWL2 714 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 EEF2KMTQ96G04 330 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 MTG1Q9BT17 334 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-221ENST00000608903 LARSQ9P2J5 1176 aaKnown RBP12.74□□□□□ -0.37
CTCFL-221ENST00000608903 DACH1Q9UI36 760 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 USP20Q9Y2K6 914 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 CCDC169A6NNP5 214 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 TISP43B9A030 160 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 EDN1P05305 212 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 MAPTP10636 758 aaKnown RBP12.74□□□□□ -0.37
CTCFL-221ENST00000608903 ATP1A3P13637 1013 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 BRDTQ58F21 947 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-221ENST00000608903 SPATA1Q5VX52 437 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 IER5Q5VY09 327 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 HAUS6Q7Z4H7 955 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 CTU1Q7Z7A3 348 aaKnown RBP12.74□□□□□ -0.37
CTCFL-221ENST00000608903 KIAA0319LQ8IZA0 1049 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 METTL13Q8N6R0 699 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 CTAGE1Q96RT6 745 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 PAK6Q9NQU5 681 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-221ENST00000608903 SUCLA2Q9P2R7 463 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-221ENST00000608903 NFE2L3Q9Y4A8 694 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 BRCA2P51587 3418 aa12.74□□□□□ -0.37
CTCFL-221ENST00000608903 MBLAC1A4D2B0 266 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-221ENST00000608903 K7ENM7 598 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 PSMA7O14818 248 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 TREHO43280 583 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 KPNA6O60684 536 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 CCL5P13501 91 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 ZNF18P17022 549 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 GTF2BQ00403 316 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 LAMTOR4Q0VGL1 99 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 SLC9C1Q4G0N8 1177 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 ST6GALNAC4Q9H4F1 302 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 SPC25Q9HBM1 224 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 KMT5AQ9NQR1 393 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 ARHGAP28Q9P2N2 729 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 ZKSCAN5Q9Y2L8 839 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 EIF3DO15371 548 aaKnown RBP eCLIP12.73□□□□□ -0.37
CTCFL-221ENST00000608903 KNOP1Q1ED39 458 aaKnown RBP12.73□□□□□ -0.37
CTCFL-221ENST00000608903 ZNF830Q96NB3 372 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-221ENST00000608903 PPP1R16BQ96T49 567 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 GTPBP4Q9BZE4 634 aaKnown RBP12.73□□□□□ -0.37
CTCFL-221ENST00000608903 C17orf75Q9HAS0 396 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.73□□□□□ -0.379e-7■■□□□ 11.8
CTCFL-221ENST00000608903 NRCAMQ92823 1304 aa12.73□□□□□ -0.37
CTCFL-221ENST00000608903 RRN3P2A6NIE6 340 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 BECN2A8MW95 431 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 MAGEB2O15479 319 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 VTNP04004 478 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 PTMAP06454 111 aaKnown RBP12.72□□□□□ -0.37
CTCFL-221ENST00000608903 CTCFP49711 727 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-221ENST00000608903 ACLYP53396 1101 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 DMP1Q13316 513 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-221ENST00000608903 CDKAL1Q5VV42 579 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 GDF6Q6KF10 455 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-221ENST00000608903 NFRKBQ6P4R8 1299 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 RHPN2Q8IUC4 686 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 WNT8BQ93098 351 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 DEFB118Q96PH6 123 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 SIP14410 1827 aa12.72□□□□□ -0.37
CTCFL-221ENST00000608903 DENND3A2RUS2 1198 aa12.71□□□□□ -0.37
CTCFL-221ENST00000608903 SMTNL1A8MU46 457 aa12.71□□□□□ -0.37
CTCFL-221ENST00000608903 ANKRD63C9JTQ0 380 aa12.71□□□□□ -0.37
CTCFL-221ENST00000608903 MSCO60682 206 aa12.71□□□□□ -0.37
CTCFL-221ENST00000608903 SRGAP2CP0DJJ0 459 aa12.71□□□□□ -0.37
CTCFL-221ENST00000608903 NAMPTP43490 491 aa12.71□□□□□ -0.37
CTCFL-221ENST00000608903 STIM1Q13586 685 aa12.71□□□□□ -0.37
CTCFL-221ENST00000608903 SLC39A4Q6P5W5 647 aa12.71□□□□□ -0.37
CTCFL-221ENST00000608903 LRRC55Q6ZSA7 311 aa12.71□□□□□ -0.37
CTCFL-221ENST00000608903 APTXQ7Z2E3 356 aaKnown RBP12.71□□□□□ -0.37
CTCFL-221ENST00000608903 RNF180Q86T96 592 aa12.71□□□□□ -0.37
CTCFL-221ENST00000608903 PSPC1Q8WXF1 523 aaKnown RBP12.71□□□□□ -0.37
CTCFL-221ENST00000608903 KATNAL1Q9BW62 490 aa12.71□□□□□ -0.37
CTCFL-221ENST00000608903 SRRTQ9BXP5 876 aaKnown RBP12.71□□□□□ -0.37
CTCFL-221ENST00000608903 MINDY3Q9H8M7 445 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms