RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 CATSPER4Q7RTX7 472 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 SPRED2Q7Z698 418 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 TMEM192Q8IY95 271 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 CMTR2Q8IYT2 770 aaKnown RBP18.42■□□□□ 0.54
LINC00240-203ENST00000606878 RNF149Q8NC42 400 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 SLC17A8Q8NDX2 589 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 FBXO22Q8NEZ5 403 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 SNX29Q8TEQ0 813 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 PPM1EQ8WY54 764 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 TMEM161AQ9NX61 479 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 RWDD3Q9Y3V2 267 aa18.42■□□□□ 0.54
LINC00240-203ENST00000606878 ARHGEF35A5YM69 484 aa18.41■□□□□ 0.54
LINC00240-203ENST00000606878 USO1O60763 962 aaKnown RBP18.41■□□□□ 0.54
LINC00240-203ENST00000606878 HSP90AA1P07900 732 aaKnown RBP18.41■□□□□ 0.54
LINC00240-203ENST00000606878 PHKA2P46019 1235 aa18.41■□□□□ 0.54
LINC00240-203ENST00000606878 POU5F1BQ06416 359 aa18.41■□□□□ 0.54
LINC00240-203ENST00000606878 EPC2Q52LR7 807 aa18.41■□□□□ 0.54
LINC00240-203ENST00000606878 PADI6Q6TGC4 694 aa18.41■□□□□ 0.54
LINC00240-203ENST00000606878 MCPH1Q8NEM0 835 aa18.41■□□□□ 0.54
LINC00240-203ENST00000606878 LMCD1Q9NZU5 365 aa18.41■□□□□ 0.54
LINC00240-203ENST00000606878 DNM3Q9UQ16 869 aa18.41■□□□□ 0.54
LINC00240-203ENST00000606878 ADGRA3Q8IWK6 1321 aa18.41■□□□□ 0.54
LINC00240-203ENST00000606878 GBF1Q92538 1859 aa18.41■□□□□ 0.54
LINC00240-203ENST00000606878 CHD9Q3L8U1 2897 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 A0A0U1RQF3 1178 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 VWA3AA6NCI4 1184 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 EOMESO95936 686 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 RB1P06400 928 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 CYP11B2P19099 503 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 CDC25AP30304 524 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 BMPR1AP36894 532 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 NCBP1Q09161 790 aaKnown RBP18.4■□□□□ 0.54
LINC00240-203ENST00000606878 CCDC85BQ15834 202 aaPredicted RBP18.4■□□□□ 0.54
LINC00240-203ENST00000606878 ECM1Q16610 540 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 FAM102BQ5T8I3 360 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 MAEAQ7L5Y9 396 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 RC3H2Q9HBD1 1191 aaKnown RBP18.4■□□□□ 0.54
LINC00240-203ENST00000606878 DDX19AQ9NUU7 478 aaKnown RBP18.4■□□□□ 0.54
LINC00240-203ENST00000606878 MTCH2Q9Y6C9 303 aa18.4■□□□□ 0.54
LINC00240-203ENST00000606878 HOXA2O43364 376 aa18.39■□□□□ 0.53
LINC00240-203ENST00000606878 LPXNO60711 386 aa18.39■□□□□ 0.53
LINC00240-203ENST00000606878 SKIP12755 728 aa18.39■□□□□ 0.53
LINC00240-203ENST00000606878 PDIA4P13667 645 aaKnown RBP18.39■□□□□ 0.53
LINC00240-203ENST00000606878 PTENP60484 403 aa18.39■□□□□ 0.53
LINC00240-203ENST00000606878 GPM6BQ13491 265 aa18.39■□□□□ 0.53
LINC00240-203ENST00000606878 PCBP1Q15365 356 aaKnown RBP eCLIP18.39■□□□□ 0.53
LINC00240-203ENST00000606878 TWF2Q6IBS0 349 aaKnown RBP18.39■□□□□ 0.53
LINC00240-203ENST00000606878 ECHDC2Q86YB7 292 aa18.39■□□□□ 0.53
LINC00240-203ENST00000606878 ASAP3Q8TDY4 903 aa18.39■□□□□ 0.53
LINC00240-203ENST00000606878 CLP1Q92989 425 aaKnown RBP18.39■□□□□ 0.53
LINC00240-203ENST00000606878 POLR3FQ9H1D9 316 aaPredicted RBP18.39■□□□□ 0.53
LINC00240-203ENST00000606878 BHMT2Q9H2M3 363 aa18.39■□□□□ 0.53
LINC00240-203ENST00000606878 PIN4Q9Y237 131 aaKnown RBP18.39■□□□□ 0.53
LINC00240-203ENST00000606878 SIP14410 1827 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 TBKBP1A7MCY6 615 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 PP2D1A8MPX8 630 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 H3BNC9 293 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 STX6O43752 255 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 GLRA2P23416 452 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 SF3A1Q15459 793 aaKnown RBP18.38■□□□□ 0.53
LINC00240-203ENST00000606878 ZRSR1Q15695 479 aaKnown RBP18.38■□□□□ 0.53
LINC00240-203ENST00000606878 PAN2Q504Q3 1202 aaKnown RBP18.38■□□□□ 0.53
LINC00240-203ENST00000606878 MICALL1Q8N3F8 863 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 KCTD17Q8N5Z5 321 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 RNF169Q8NCN4 708 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 GDPD5Q8WTR4 605 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 AK8Q96MA6 479 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 TRAIPQ9BWF2 469 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 PLVAPQ9BX97 442 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 ZSCAN16Q9H4T2 348 aaPredicted RBP18.38■□□□□ 0.53
LINC00240-203ENST00000606878 MINDY3Q9H8M7 445 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 MTMR6Q9Y217 621 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 PTPRSQ13332 1948 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 LOXHD1Q8IVV2 1947 aa18.38■□□□□ 0.53
LINC00240-203ENST00000606878 PRRC2BQ5JSZ5 2229 aaKnown RBP18.38■□□□□ 0.53
LINC00240-203ENST00000606878 INO80B-WBP1J3KQ70 363 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 ERLIN2O94905 339 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 EYA4O95677 639 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 CTNNB1P35222 781 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 GATMP50440 423 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 PTPROQ16827 1216 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 IFNLR1Q8IU57 520 aaPredicted RBP18.37■□□□□ 0.53
LINC00240-203ENST00000606878 ABI1Q8IZP0 508 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 CDK5RAP3Q96JB5 506 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 MMTAG2Q9BU76 263 aaKnown RBP18.37■□□□□ 0.53
LINC00240-203ENST00000606878 TMEM117Q9H0C3 514 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 GPRC5CQ9NQ84 441 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 AAASQ9NRG9 546 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 AGPAT5Q9NUQ2 364 aa18.37■□□□□ 0.53
LINC00240-203ENST00000606878 MRPL42Q9Y6G3 142 aaKnown RBP18.37■□□□□ 0.53
LINC00240-203ENST00000606878 E9PMD0 336 aa18.36■□□□□ 0.53
LINC00240-203ENST00000606878 C5orf67F2Z3F1 127 aa18.36■□□□□ 0.53
LINC00240-203ENST00000606878 ZNF623O75123 536 aa18.36■□□□□ 0.53
LINC00240-203ENST00000606878 FGFR1P11362 822 aa18.36■□□□□ 0.53
LINC00240-203ENST00000606878 UBA7P41226 1012 aa18.36■□□□□ 0.53
LINC00240-203ENST00000606878 RESTQ13127 1097 aa18.36■□□□□ 0.53
LINC00240-203ENST00000606878 CAPSQ13938 189 aa18.36■□□□□ 0.53
LINC00240-203ENST00000606878 NAALADL2Q58DX5 795 aa18.36■□□□□ 0.53
LINC00240-203ENST00000606878 SPOUT1Q5T280 376 aaKnown RBP18.36■□□□□ 0.53
LINC00240-203ENST00000606878 C11orf84Q9BUA3 381 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms