RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 RWDD2AQ9UIY3 292 aa11.91□□□□□ -0.5
SCNM1-207ENST00000602841 COL4A3BPQ9Y5P4 624 aa11.91□□□□□ -0.5
SCNM1-207ENST00000602841 BDP1A6H8Y1 2624 aa11.91□□□□□ -0.5
SCNM1-207ENST00000602841 ZMYM2Q9UBW7 1377 aa11.91□□□□□ -0.5
SCNM1-207ENST00000602841 SYNRGQ9UMZ2 1314 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 H3BRB1 525 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 RBAK-RBAKDNI3L0D1 243 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 NOP56O00567 594 aaKnown RBP11.9□□□□□ -0.5
SCNM1-207ENST00000602841 TGFB1I1O43294 461 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 HMGCRP04035 888 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 MAPTP10636 758 aaKnown RBP11.9□□□□□ -0.5
SCNM1-207ENST00000602841 GAP43P17677 238 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 GLRA2P23416 452 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 CCNE1P24864 410 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 CST5P28325 142 aaPredicted RBP11.9□□□□□ -0.5
SCNM1-207ENST00000602841 STX17P56962 302 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 GTF2BQ00403 316 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 PURAQ00577 322 aaKnown RBP11.9□□□□□ -0.5
SCNM1-207ENST00000602841 DGKDQ16760 1214 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 LRRC26Q2I0M4 334 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 ZC2HC1CQ53FD0 456 aaPredicted RBP11.9□□□□□ -0.5
SCNM1-207ENST00000602841 SPATA1Q5VX52 437 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 MAEAQ7L5Y9 396 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 KSR1Q8IVT5 923 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 TMEM161BQ8NDZ6 487 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 SPIRE2Q8WWL2 714 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 ATXN2LQ8WWM7 1075 aaKnown RBP11.9□□□□□ -0.5
SCNM1-207ENST00000602841 NELFBQ8WX92 580 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 DHTKD1Q96HY7 919 aaPredicted RBP11.9□□□□□ -0.5
SCNM1-207ENST00000602841 UHRF1Q96T88 793 aaPredicted RBP11.9□□□□□ -0.5
SCNM1-207ENST00000602841 TUT1Q9H6E5 874 aaKnown RBP11.9□□□□□ -0.5
SCNM1-207ENST00000602841 AZI2Q9H6S1 392 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 PARVGQ9HBI0 331 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 ERAP1Q9NZ08 941 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 SEL1LQ9UBV2 794 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 TCEAL9Q9UHQ7 104 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 OGDHLQ9ULD0 1010 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 HCN4Q9Y3Q4 1203 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 PPME1Q9Y570 386 aa11.9□□□□□ -0.5
SCNM1-207ENST00000602841 GRIN2DO15399 1336 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 ARID2Q68CP9 1835 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 MBLAC1A4D2B0 266 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-207ENST00000602841 PRPF6O94906 941 aaKnown RBP11.89□□□□□ -0.51
SCNM1-207ENST00000602841 EDN1P05305 212 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 COL6A1P12109 1028 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 ATP1A3P13637 1013 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 RFC5P40937 340 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 NPTX2P47972 431 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 MCCD1P59942 119 aaPredicted RBP11.89□□□□□ -0.51
SCNM1-207ENST00000602841 MYL5Q02045 173 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 EMC2Q15006 297 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 SHHQ15465 462 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 LRRC55Q6ZSA7 311 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 MYCT1Q8N699 235 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 PPP1R13LQ8WUF5 828 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 GLG1Q92896 1179 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 P2RX5Q93086 422 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 TMEM143Q96AN5 459 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 FAM167AQ96KS9 214 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 CTAGE1Q96RT6 745 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 LRFN3Q9BTN0 628 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 ATP6V0A4Q9HBG4 840 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 ARHGAP28Q9P2N2 729 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 CTNND2Q9UQB3 1225 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 TRAF3IP3Q9Y228 551 aa11.89□□□□□ -0.51
SCNM1-207ENST00000602841 DNAH12Q6ZR08 3092 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 CACNA1AO00555 2505 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 LRRC10BA6NIK2 292 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 EIF3DO15371 548 aaKnown RBP eCLIP11.88□□□□□ -0.51
SCNM1-207ENST00000602841 FAM13AO94988 1023 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 PGK1P00558 417 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 KLRC1P26715 233 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 PAK1Q13153 545 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 FSCN1Q16658 493 aaKnown RBP11.88□□□□□ -0.51
SCNM1-207ENST00000602841 ZNF484Q5JVG2 852 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 ODR4Q5SWX8 454 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 C9orf50Q5SZB4 431 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 KLHL10Q6JEL2 608 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 SARM1Q6SZW1 724 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 MYOCDQ8IZQ8 938 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 TMEM174Q8WUU8 243 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 GTPBP4Q9BZE4 634 aaKnown RBP11.88□□□□□ -0.51
SCNM1-207ENST00000602841 C17orf75Q9HAS0 396 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 INTS13Q9NVM9 706 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 DMAC2Q9NW81 257 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 DDX20Q9UHI6 824 aaKnown RBP11.88□□□□□ -0.51
SCNM1-207ENST00000602841 NFE2L3Q9Y4A8 694 aa11.88□□□□□ -0.51
SCNM1-207ENST00000602841 NCOR1O75376 2440 aa11.87□□□□□ -0.51
SCNM1-207ENST00000602841 SLC16A4O15374 487 aa11.87□□□□□ -0.51
SCNM1-207ENST00000602841 SMIM10L2AP0DMW4 78 aa11.87□□□□□ -0.51
SCNM1-207ENST00000602841 SMIM10L2BP0DMW5 78 aa11.87□□□□□ -0.51
SCNM1-207ENST00000602841 PSEN2P49810 448 aa11.87□□□□□ -0.51
SCNM1-207ENST00000602841 PEX3P56589 373 aa11.87□□□□□ -0.51
SCNM1-207ENST00000602841 SMAD3P84022 425 aaKnown RBP11.87□□□□□ -0.51
SCNM1-207ENST00000602841 ZNF200P98182 395 aaPredicted RBP11.87□□□□□ -0.51
SCNM1-207ENST00000602841 CAPSQ13938 189 aa11.87□□□□□ -0.51
SCNM1-207ENST00000602841 GRIN2CQ14957 1233 aa11.87□□□□□ -0.51
SCNM1-207ENST00000602841 FAM102BQ5T8I3 360 aa11.87□□□□□ -0.51
SCNM1-207ENST00000602841 SLC39A4Q6P5W5 647 aa11.87□□□□□ -0.51
SCNM1-207ENST00000602841 MTHFD1LQ6UB35 978 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms