RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 KRT75O95678 551 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 PABPC4LP0CB38 370 aaKnown RBP7.91□□□□□ -1.14
LINC00347-202ENST00000594461 CALM1P0DP23 149 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 CALM2P0DP24 149 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 CALM3P0DP25 149 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 TBXAS1P24557 533 aaPredicted RBP7.91□□□□□ -1.14
LINC00347-202ENST00000594461 CSTF2P33240 577 aaKnown RBP eCLIP7.91□□□□□ -1.14
LINC00347-202ENST00000594461 KRT20P35900 424 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 HSPA9P38646 679 aaKnown RBP7.91□□□□□ -1.14
LINC00347-202ENST00000594461 RGS2P41220 211 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 MTHFRP42898 656 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 MSH2P43246 934 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 CEBPAP49715 358 aaPredicted RBP7.91□□□□□ -1.14
LINC00347-202ENST00000594461 EIF2B2P49770 351 aaKnown RBP7.91□□□□□ -1.14
LINC00347-202ENST00000594461 KCNJ2P63252 427 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 PFKPQ01813 784 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 RELQ04864 619 aaPredicted RBP7.91□□□□□ -1.14
LINC00347-202ENST00000594461 TRAP1Q12931 704 aaKnown RBP7.91□□□□□ -1.14
LINC00347-202ENST00000594461 ITGA9Q13797 1035 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 RASGRF1Q13972 1273 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 GSTA3Q16772 222 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 MIGA2Q7L4E1 593 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 UBE3BQ7Z3V4 1068 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 GATAD2AQ86YP4 633 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 SH2D3CQ8N5H7 860 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 ANKS4BQ8N8V4 417 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 CAGE1Q8TC20 777 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 PLEKHO2Q8TD55 490 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 HSPBAP1Q96EW2 488 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 C8orf37Q96NL8 207 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 PALMDQ9NP74 551 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 IFNKQ9P0W0 207 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 ZMYND8Q9ULU4 1186 aaPredicted RBP7.91□□□□□ -1.14
LINC00347-202ENST00000594461 TBC1D30Q9Y2I9 924 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 RGS12O14924 1447 aa7.91□□□□□ -1.14
LINC00347-202ENST00000594461 CEP152O94986 1710 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 RPRD2Q5VT52 1461 aaKnown RBP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 SH3PXD2BA1X283 911 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 SNPHO15079 494 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 SULT1B1O43704 296 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 CNOT3O75175 753 aaKnown RBP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 YEATS4O95619 227 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 POLR2CP19387 275 aaPredicted RBP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 RPL9P32969 192 aaKnown RBP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 SMARCB1Q12824 385 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 RCN2Q14257 317 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 PLEKHG6Q3KR16 790 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 TRAPPC3LQ5T215 181 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 BTBD8Q5XKL5 378 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 FBXO31Q5XUX0 539 aaPredicted RBP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 PPP1R21Q6ZMI0 780 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 DDX42Q86XP3 938 aaKnown RBP eCLIP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 ASAP3Q8TDY4 903 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 AENQ8WTP8 325 aaKnown RBP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 SLC7A3Q8WY07 619 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 DHX38Q92620 1227 aaKnown RBP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 METTL2AQ96IZ6 378 aaKnown RBP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 CTRCQ99895 268 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 SPZ1Q9BXG8 430 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 NIFKQ9BYG3 293 aaKnown RBP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 EHD1Q9H4M9 534 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 TMEM206Q9H813 350 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 EMC3Q9P0I2 261 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 KLHL3Q9UH77 587 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 TRAF3IP3Q9Y228 551 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 MRPL11Q9Y3B7 192 aaKnown RBP7.9□□□□□ -1.14
LINC00347-202ENST00000594461 RABGAP1Q9Y3P9 1069 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 RWDD3Q9Y3V2 267 aa7.9□□□□□ -1.14
LINC00347-202ENST00000594461 CARNS1A5YM72 827 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 A8MX80 341 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 INO80B-WBP1J3KQ70 363 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 PIK3CDO00329 1044 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 CASQ2O14958 399 aaPredicted RBP7.9□□□□□ -1.15
LINC00347-202ENST00000594461 PRKAR1BP31321 381 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 UBA7P41226 1012 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 PLCD1P51178 756 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 PPP2R2BQ00005 443 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 TRIM28Q13263 835 aaKnown RBP7.9□□□□□ -1.15
LINC00347-202ENST00000594461 STK38Q15208 465 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 SF3B3Q15393 1217 aaKnown RBP7.9□□□□□ -1.15
LINC00347-202ENST00000594461 SGO2Q562F6 1265 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 AKAP4Q5JQC9 854 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 SPOPLQ6IQ16 392 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 METTL2BQ6P1Q9 378 aaKnown RBP7.9□□□□□ -1.15
LINC00347-202ENST00000594461 KIF6Q6ZMV9 814 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 CPLX4Q7Z7G2 160 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 CCDC197Q8NCU1 140 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 LILRB4Q8NHJ6 448 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 ZSCAN31Q96LW9 406 aaPredicted RBP7.9□□□□□ -1.15
LINC00347-202ENST00000594461 NELL2Q99435 816 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 TSG101Q99816 390 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 KIAA1683Q9H0B3 1180 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 HPS4Q9NQG7 708 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 ARMC1Q9NVT9 282 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 EHD2Q9NZN4 543 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 USP20Q9Y2K6 914 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 SPEF1Q9Y4P9 236 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 PCDHGA8Q9Y5G5 932 aa7.9□□□□□ -1.15
LINC00347-202ENST00000594461 PCDHGA11Q9Y5H2 935 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms