RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 NLRP5P59047 1200 aa16.59■□□□□ 0.25
PNKP-202ENST00000593706 KCNC3Q14003 757 aa16.59■□□□□ 0.25
PNKP-202ENST00000593706 PTPN21Q16825 1174 aa16.59■□□□□ 0.25
PNKP-202ENST00000593706 MTERF2Q49AM1 385 aa16.59■□□□□ 0.25
PNKP-202ENST00000593706 CASP10Q92851 521 aa16.59■□□□□ 0.25
PNKP-202ENST00000593706 UNC45AQ9H3U1 944 aa16.59■□□□□ 0.25
PNKP-202ENST00000593706 PLXNA3P51805 1871 aa16.59■□□□□ 0.25
PNKP-202ENST00000593706 A0A0U1RQF3 1178 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 EOMESO95936 686 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 SFPQP23246 707 aaKnown RBP eCLIP16.58■□□□□ 0.24
PNKP-202ENST00000593706 ALDH7A1P49419 539 aaKnown RBP16.58■□□□□ 0.24
PNKP-202ENST00000593706 USP11P51784 963 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 CCT2P78371 535 aaKnown RBP16.58■□□□□ 0.24
PNKP-202ENST00000593706 BMS1Q14692 1282 aaKnown RBP16.58■□□□□ 0.24
PNKP-202ENST00000593706 TPRNQ4KMQ1 711 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 IER5LQ5T953 404 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 CES5AQ6NT32 575 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 SYCE2Q6PIF2 218 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 MIER3Q7Z3K6 550 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 TRIM22Q8IYM9 498 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 SLC39A11Q8N1S5 342 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 SLC5A5Q92911 643 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 GJA10Q969M2 543 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 TMEM169Q96HH4 297 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 GCOM2Q9BZD3 368 aaPredicted RBP16.58■□□□□ 0.24
PNKP-202ENST00000593706 S1PR5Q9H228 398 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 NCOA5Q9HCD5 579 aaKnown RBP16.58■□□□□ 0.24
PNKP-202ENST00000593706 NR2E1Q9Y466 385 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 HCFC2Q9Y5Z7 792 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 CYP46A1Q9Y6A2 500 aa16.58■□□□□ 0.24
PNKP-202ENST00000593706 ZFHX2Q9C0A1 2572 aaPredicted RBP16.58■□□□□ 0.24
PNKP-202ENST00000593706 ZC3H11AO75152 810 aaKnown RBP eCLIP16.57■□□□□ 0.24
PNKP-202ENST00000593706 CSDE1O75534 798 aaKnown RBP16.57■□□□□ 0.24
PNKP-202ENST00000593706 IFNAR1P17181 557 aa16.57■□□□□ 0.24
PNKP-202ENST00000593706 DNM2P50570 870 aa16.57■□□□□ 0.24
PNKP-202ENST00000593706 TWF2Q6IBS0 349 aaKnown RBP16.57■□□□□ 0.24
PNKP-202ENST00000593706 TMEM87AQ8NBN3 555 aa16.57■□□□□ 0.24
PNKP-202ENST00000593706 RDM1Q8NG50 284 aa16.57■□□□□ 0.24
PNKP-202ENST00000593706 TBCKQ8TEA7 893 aa16.57■□□□□ 0.24
PNKP-202ENST00000593706 C22orf23Q9BZE7 217 aa16.57■□□□□ 0.24
PNKP-202ENST00000593706 SH3GLB2Q9NR46 395 aa16.57■□□□□ 0.24
PNKP-202ENST00000593706 CDH22Q9UJ99 828 aa16.57■□□□□ 0.24
PNKP-202ENST00000593706 WDR87Q6ZQQ6 2873 aa16.57■□□□□ 0.24
PNKP-202ENST00000593706 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.56■□□□□ 0.24
PNKP-202ENST00000593706 C2orf71A6NGG8 1288 aa16.56■□□□□ 0.24
PNKP-202ENST00000593706 NT5C1B-RDH14C9J2C7 533 aa16.56■□□□□ 0.24
PNKP-202ENST00000593706 BCAR1P56945 870 aa16.56■□□□□ 0.24
PNKP-202ENST00000593706 DRP2Q13474 957 aa16.56■□□□□ 0.24
PNKP-202ENST00000593706 XKR3Q5GH77 459 aa16.56■□□□□ 0.24
PNKP-202ENST00000593706 ZNF598Q86UK7 904 aaKnown RBP16.56■□□□□ 0.24
PNKP-202ENST00000593706 NECTIN4Q96NY8 510 aa16.56■□□□□ 0.24
PNKP-202ENST00000593706 PHOX2BQ99453 314 aa16.56■□□□□ 0.24
PNKP-202ENST00000593706 PIN4Q9Y237 131 aaKnown RBP16.56■□□□□ 0.24
PNKP-202ENST00000593706 MTCL1Q9Y4B5 1905 aaKnown RBP16.56■□□□□ 0.24
PNKP-202ENST00000593706 SPTBN4Q9H254 2564 aa16.56■□□□□ 0.24
PNKP-202ENST00000593706 TMEM150BA6NC51 233 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 PSMD10O75832 226 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 TDP2O95551 362 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 PHKA2P46019 1235 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 VCPP55072 806 aaKnown RBP16.55■□□□□ 0.24
PNKP-202ENST00000593706 ANAPC15P60006 121 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 CDC42EP1Q00587 391 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 RNASELQ05823 741 aaKnown RBP16.55■□□□□ 0.24
PNKP-202ENST00000593706 ITIH3Q06033 890 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 TARBP2Q15633 366 aaKnown RBP16.55■□□□□ 0.24
PNKP-202ENST00000593706 LONRF3Q496Y0 759 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 RHPN2Q8IUC4 686 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 MRPL43Q8N983 215 aaKnown RBP16.55■□□□□ 0.24
PNKP-202ENST00000593706 ASIC4Q96FT7 647 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 ZNF274Q96GC6 653 aaPredicted RBP16.55■□□□□ 0.24
PNKP-202ENST00000593706 SH2D3AQ9BRG2 576 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 POMKQ9H5K3 350 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 CHST12Q9NRB3 414 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 PCDHA4Q9UN74 947 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 INPP5FQ9Y2H2 1132 aa16.55■□□□□ 0.24
PNKP-202ENST00000593706 A0A087WZ62 844 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 CPLX1O14810 134 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 CLASP2O75122 1294 aaKnown RBP16.54■□□□□ 0.24
PNKP-202ENST00000593706 SKIP12755 728 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 SSRP1Q08945 709 aaKnown RBP16.54■□□□□ 0.24
PNKP-202ENST00000593706 TCF15Q12870 199 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 MTMR3Q13615 1198 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 Q4G0T1 1027 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 RARS2Q5T160 578 aaKnown RBP16.54■□□□□ 0.24
PNKP-202ENST00000593706 GLB1LQ6UWU2 654 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 ZNF410Q86VK4 478 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 VPS52Q8N1B4 723 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 KREMEN2Q8NCW0 462 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 RSPH1Q8WYR4 309 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 LPPQ93052 612 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 RIPOR3Q96MK2 946 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 NLRP4Q96MN2 994 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 FDXACB1Q9BRP7 624 aaPredicted RBP16.54■□□□□ 0.24
PNKP-202ENST00000593706 NIFKQ9BYG3 293 aaKnown RBP16.54■□□□□ 0.24
PNKP-202ENST00000593706 INO80BQ9C086 356 aaPredicted RBP16.54■□□□□ 0.24
PNKP-202ENST00000593706 SORCS3Q9UPU3 1222 aa16.54■□□□□ 0.24
PNKP-202ENST00000593706 CARNS1A5YM72 827 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 DDX11L8A8MPP1 907 aa16.53■□□□□ 0.24
PNKP-202ENST00000593706 C2CD4DB7Z1M9 353 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms