RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 NSUN6Q8TEA1 469 aaKnown RBP21.48■■□□□ 1.03
MBD3-209ENST00000592012 SENP7Q9BQF6 1050 aa21.48■■□□□ 1.03
MBD3-209ENST00000592012 PCIF1Q9H4Z3 704 aa21.48■■□□□ 1.03
MBD3-209ENST00000592012 PCDHA10Q9Y5I2 948 aa21.48■■□□□ 1.03
MBD3-209ENST00000592012 WDR81Q562E7 1941 aa21.48■■□□□ 1.03
MBD3-209ENST00000592012 FERP16591 822 aa21.48■■□□□ 1.03
MBD3-209ENST00000592012 STAT1P42224 750 aa21.48■■□□□ 1.03
MBD3-209ENST00000592012 ANO5Q75V66 913 aa21.48■■□□□ 1.03
MBD3-209ENST00000592012 SPATA4Q8NEY3 305 aa21.48■■□□□ 1.03
MBD3-209ENST00000592012 CBWD1Q9BRT8 395 aa21.48■■□□□ 1.03
MBD3-209ENST00000592012 POLR2AP24928 1970 aaKnown RBP21.48■■□□□ 1.03
MBD3-209ENST00000592012 F8VZ95 297 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 PEX3P56589 373 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 SMC1AQ14683 1233 aaKnown RBP21.47■■□□□ 1.03
MBD3-209ENST00000592012 MMGT1Q8N4V1 131 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 TEX13BQ9BXU2 312 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 CYP39A1Q9NYL5 469 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 DNAJC12Q9UKB3 198 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 AFG3L2Q9Y4W6 797 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 EVI5O60447 810 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 GFPT2O94808 682 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 KCNA2P16389 499 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 SOX5P35711 763 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 NCKAP1LP55160 1127 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 INTS8Q75QN2 995 aaKnown RBP21.47■■□□□ 1.03
MBD3-209ENST00000592012 LMO3Q8TAP4 145 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 GPR88Q9GZN0 384 aa21.47■■□□□ 1.03
MBD3-209ENST00000592012 INTS2Q9H0H0 1204 aaKnown RBP21.47■■□□□ 1.03
MBD3-209ENST00000592012 SSC5DA1L4H1 1573 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 SLC16A4O15374 487 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 MCM3P25205 808 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 DLG4P78352 724 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 MYL7Q01449 175 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 DRAP1Q14919 205 aaPredicted RBP21.46■■□□□ 1.03
MBD3-209ENST00000592012 TERF2Q15554 542 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 NOL9Q5SY16 702 aaKnown RBP21.46■■□□□ 1.03
MBD3-209ENST00000592012 FAM102BQ5T8I3 360 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 MEI1Q5TIA1 1274 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 APEX2Q9UBZ4 518 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 PPP2R3BQ9Y5P8 575 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 GRID2IPA4D2P6 1211 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 DDX3XO00571 662 aaKnown RBP eCLIP21.46■■□□□ 1.031e-6■■□□□ 12.2
MBD3-209ENST00000592012 VPS36Q86VN1 386 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 A1CFQ9NQ94 594 aaKnown RBP21.46■■□□□ 1.03
MBD3-209ENST00000592012 HOXC10Q9NYD6 342 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 TMOD4Q9NZQ9 345 aa21.46■■□□□ 1.03
MBD3-209ENST00000592012 FTCDO95954 541 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 KRT13P13646 458 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 SNRPFP62306 86 aaKnown RBP21.45■■□□□ 1.02
MBD3-209ENST00000592012 DNAAF5Q86Y56 855 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 GPC2Q8N158 579 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 MSL3Q8N5Y2 521 aaKnown RBP21.45■■□□□ 1.02
MBD3-209ENST00000592012 XXYLT1Q8NBI6 393 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 OLIG1Q8TAK6 271 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 ACAD9Q9H845 621 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 SMARCAL1Q9NZC9 954 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 HSPBP1Q9NZL4 362 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 EHD2Q9NZN4 543 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 SPDYE16A6NNV3 312 aaPredicted RBP21.45■■□□□ 1.02
MBD3-209ENST00000592012 ZNF862O60290 1169 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 DMTNQ08495 405 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 CCDC181Q5TID7 509 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 PHLDB3Q6NSJ2 640 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 SLC17A8Q8NDX2 589 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 ZSWIM2Q8NEG5 633 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 SLC30A5Q8TAD4 765 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 IWS1Q96ST2 819 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 GABBR1Q9UBS5 961 aa21.45■■□□□ 1.02
MBD3-209ENST00000592012 ATP8B3O60423 1300 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 STBD1O95210 358 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 PAFAH1B1P43034 410 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 VAMP7P51809 220 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 SUPT20HL1Q3ZLR7 823 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.44■■□□□ 1.024e-7■■□□□ 13.8
MBD3-209ENST00000592012 RNF14Q9UBS8 474 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 EMSYQ7Z589 1322 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 PPP3CAQ08209 521 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 CASP8Q14790 479 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 C1orf220Q5T0J3 134 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 ILDR2Q71H61 639 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 TMEM161BQ8NDZ6 487 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 MS4A14Q96JA4 679 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 DAAM1Q9Y4D1 1078 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 TELO2Q9Y4R8 837 aa21.44■■□□□ 1.02
MBD3-209ENST00000592012 MAPK13O15264 365 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 USP2O75604 605 aaPredicted RBP21.43■■□□□ 1.02
MBD3-209ENST00000592012 ZMYND10O75800 440 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 NPTX2P47972 431 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 PRKG1Q13976 671 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 CFAP221Q4G0U5 840 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 OTUD6AQ7L8S5 288 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 SYT11Q9BT88 431 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 SMTNP53814 917 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 LNX1Q8TBB1 728 aaPredicted RBP21.43■■□□□ 1.02
MBD3-209ENST00000592012 PLEKHO2Q8TD55 490 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 CDHR1Q96JP9 859 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 NTPCRQ9BSD7 190 aaKnown RBP21.43■■□□□ 1.02
MBD3-209ENST00000592012 LRRC1Q9BTT6 524 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 INTUQ9ULD6 942 aa21.43■■□□□ 1.02
MBD3-209ENST00000592012 TBX20Q9UMR3 447 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms