RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 VPS37CA5D8V6 355 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-233ENST00000591622 LINC00271P0C7V0 271 aa18.26■□□□□ 0.51
CIRBP-233ENST00000591622 CCT6AP40227 531 aaKnown RBP18.26■□□□□ 0.51
CIRBP-233ENST00000591622 MXD4Q14582 209 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-233ENST00000591622 CCDC85BQ15834 202 aaPredicted RBP18.26■□□□□ 0.51
CIRBP-233ENST00000591622 CMTR2Q8IYT2 770 aaKnown RBP18.26■□□□□ 0.51
CIRBP-233ENST00000591622 GDPD5Q8WTR4 605 aa18.26■□□□□ 0.51
CIRBP-233ENST00000591622 PPM1EQ8WY54 764 aa18.26■□□□□ 0.51
CIRBP-233ENST00000591622 CHST12Q9NRB3 414 aa18.26■□□□□ 0.51
CIRBP-233ENST00000591622 CATSPER4Q7RTX7 472 aa18.25■□□□□ 0.51
CIRBP-233ENST00000591622 SRGAP1Q7Z6B7 1085 aa18.25■□□□□ 0.51
CIRBP-233ENST00000591622 RNF149Q8NC42 400 aa18.25■□□□□ 0.51
CIRBP-233ENST00000591622 CLP1Q92989 425 aaKnown RBP18.25■□□□□ 0.51
CIRBP-233ENST00000591622 DACT1Q9NYF0 836 aa18.25■□□□□ 0.51
CIRBP-233ENST00000591622 LMCD1Q9NZU5 365 aa18.25■□□□□ 0.51
CIRBP-233ENST00000591622 RWDD3Q9Y3V2 267 aa18.25■□□□□ 0.51
CIRBP-233ENST00000591622 LOXHD1Q8IVV2 1947 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 TTC3P53804 2025 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 A0A0U1RQF3 1178 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 H3BNC9 293 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 USO1O60763 962 aaKnown RBP18.24■□□□□ 0.51
CIRBP-233ENST00000591622 SYT1P21579 422 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 ARL2P36404 184 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 BMPR1AP36894 532 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 PHKA2P46019 1235 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 GATMP50440 423 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 ECM1Q16610 540 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 PAN2Q504Q3 1202 aaKnown RBP18.24■□□□□ 0.51
CIRBP-233ENST00000591622 FAM102BQ5T8I3 360 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 ECHDC2Q86YB7 292 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 MICALL1Q8N3F8 863 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 SNX29Q8TEQ0 813 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 MINDY3Q9H8M7 445 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 KIAA1024Q9UPX6 916 aa18.24■□□□□ 0.51
CIRBP-233ENST00000591622 MRPL42Q9Y6G3 142 aaKnown RBP18.24■□□□□ 0.51
CIRBP-233ENST00000591622 ARHGEF35A5YM69 484 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 PP2D1A8MPX8 630 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 C5orf67F2Z3F1 127 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 RB1P06400 928 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 CTNNB1P35222 781 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 POU5F1BQ06416 359 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 GPM6BQ13491 265 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 TFDP1Q14186 410 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 KRT79Q5XKE5 535 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 ARL6IP4Q66PJ3 421 aaKnown RBP18.23■□□□□ 0.51
CIRBP-233ENST00000591622 PADI6Q6TGC4 694 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.23■□□□□ 0.51
CIRBP-233ENST00000591622 MCPH1Q8NEM0 835 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 ASAP3Q8TDY4 903 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 TRAIPQ9BWF2 469 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 FOXD4L1Q9NU39 408 aa18.23■□□□□ 0.51
CIRBP-233ENST00000591622 PIN4Q9Y237 131 aaKnown RBP18.23■□□□□ 0.51
CIRBP-233ENST00000591622 ARID2Q68CP9 1835 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 VWA3AA6NCI4 1184 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 HOXA2O43364 376 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 EOMESO95936 686 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 FGFR1P11362 822 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 GLRA2P23416 452 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 CDC25AP30304 524 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 PTENP60484 403 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 CAPSQ13938 189 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 TWF2Q6IBS0 349 aaKnown RBP18.22■□□□□ 0.51
CIRBP-233ENST00000591622 MAEAQ7L5Y9 396 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 MMTAG2Q9BU76 263 aaKnown RBP18.22■□□□□ 0.51
CIRBP-233ENST00000591622 C11orf84Q9BUA3 381 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-233ENST00000591622 POLR3FQ9H1D9 316 aaPredicted RBP18.22■□□□□ 0.51
CIRBP-233ENST00000591622 GPRC5CQ9NQ84 441 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 AGPAT5Q9NUQ2 364 aa18.22■□□□□ 0.51
CIRBP-233ENST00000591622 DDX19AQ9NUU7 478 aaKnown RBP18.22■□□□□ 0.51
CIRBP-233ENST00000591622 TBKBP1A7MCY6 615 aa18.21■□□□□ 0.51
CIRBP-233ENST00000591622 BMP15O95972 392 aa18.21■□□□□ 0.51
CIRBP-233ENST00000591622 CYP11B2P19099 503 aa18.21■□□□□ 0.51
CIRBP-233ENST00000591622 PCBP1Q15365 356 aaKnown RBP eCLIP18.21■□□□□ 0.51
CIRBP-233ENST00000591622 ZNF598Q86UK7 904 aaKnown RBP18.21■□□□□ 0.51
CIRBP-233ENST00000591622 IFNLR1Q8IU57 520 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-233ENST00000591622 HSCBQ8IWL3 235 aa18.21■□□□□ 0.51
CIRBP-233ENST00000591622 RNF169Q8NCN4 708 aa18.21■□□□□ 0.51
CIRBP-233ENST00000591622 PLVAPQ9BX97 442 aa18.21■□□□□ 0.51
CIRBP-233ENST00000591622 NFKBIZQ9BYH8 718 aa18.21■□□□□ 0.51
CIRBP-233ENST00000591622 TMEM117Q9H0C3 514 aa18.21■□□□□ 0.51
CIRBP-233ENST00000591622 BHMT2Q9H2M3 363 aa18.21■□□□□ 0.51
CIRBP-233ENST00000591622 DNM3Q9UQ16 869 aa18.21■□□□□ 0.51
CIRBP-233ENST00000591622 COL4A4P53420 1690 aaPredicted RBP18.21■□□□□ 0.51
CIRBP-233ENST00000591622 SKIP12755 728 aa18.2■□□□□ 0.5
CIRBP-233ENST00000591622 ATF7P17544 494 aaPredicted RBP18.2■□□□□ 0.5
CIRBP-233ENST00000591622 HOXA11P31270 313 aaPredicted RBP18.2■□□□□ 0.5
CIRBP-233ENST00000591622 PTPROQ16827 1216 aa18.2■□□□□ 0.5
CIRBP-233ENST00000591622 MRPL38Q96DV4 380 aaKnown RBP18.2■□□□□ 0.5
CIRBP-233ENST00000591622 CASD1Q96PB1 797 aa18.2■□□□□ 0.5
CIRBP-233ENST00000591622 FAM105AQ9NUU6 356 aa18.2■□□□□ 0.5
CIRBP-233ENST00000591622 RNF19AQ9NV58 838 aa18.2■□□□□ 0.5
CIRBP-233ENST00000591622 PRUNE2Q8WUY3 3088 aa18.2■□□□□ 0.5
CIRBP-233ENST00000591622 UNC80Q8N2C7 3258 aa18.2■□□□□ 0.5
CIRBP-233ENST00000591622 E9PMD0 336 aa18.19■□□□□ 0.5
CIRBP-233ENST00000591622 INO80B-WBP1J3KQ70 363 aa18.19■□□□□ 0.5
CIRBP-233ENST00000591622 ZNF623O75123 536 aa18.19■□□□□ 0.5
CIRBP-233ENST00000591622 ERLIN2O94905 339 aa18.19■□□□□ 0.5
CIRBP-233ENST00000591622 EYA4O95677 639 aa18.19■□□□□ 0.5
CIRBP-233ENST00000591622 RAB27AP51159 221 aa18.19■□□□□ 0.5
CIRBP-233ENST00000591622 MBTD1Q05BQ5 628 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms