RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 IL31RAQ8NI17 732 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 CCDC43Q96MW1 224 aaKnown RBP10.89□□□□□ -0.67
VPS25-202ENST00000589219 GBP3Q9H0R5 595 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 RNF208Q9H0X6 261 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 RNF146Q9NTX7 359 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 AIPL1Q9NZN9 384 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 SAR1BQ9Y6B6 198 aa10.89□□□□□ -0.67
VPS25-202ENST00000589219 BZW2Q9Y6E2 419 aaKnown RBP10.89□□□□□ -0.67
VPS25-202ENST00000589219 PARP14Q460N5 1801 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 CCDC151A5D8V7 595 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 RCCD1A6NED2 376 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 WDR64B1ANS9 1081 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 VWA5AO00534 786 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 ZNF263O14978 683 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 TGFB1I1O43294 461 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 ADCY3O60266 1144 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 DKC1O60832 514 aaKnown RBP eCLIP10.88□□□□□ -0.67
VPS25-202ENST00000589219 HIP1RO75146 1068 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 ERLIN1O75477 346 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 PPP1R37O75864 691 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 AKAP3O75969 853 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 PLEKP08567 350 aaPredicted RBP10.88□□□□□ -0.67
VPS25-202ENST00000589219 CCL5P13501 91 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 RFX1P22670 979 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 CCND2P30279 289 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 MAGEA1P43355 309 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 QARSP47897 775 aaKnown RBP10.88□□□□□ -0.67
VPS25-202ENST00000589219 GJA8P48165 433 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 FLT3LGP49771 235 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 HMGCS2P54868 508 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 SNRPFP62306 86 aaKnown RBP10.88□□□□□ -0.67
VPS25-202ENST00000589219 RPS6P62753 249 aaKnown RBP10.88□□□□□ -0.67
VPS25-202ENST00000589219 MAPK7Q13164 816 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 IRF5Q13568 498 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 RAPGEF1Q13905 1077 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 PGM5Q15124 567 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 PPP2R5AQ15172 486 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 MTFR1Q15390 333 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 FAM110CQ1W6H9 321 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 MUM1L1Q5H9M0 696 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 DCAF17Q5H9S7 520 aaPredicted RBP10.88□□□□□ -0.67
VPS25-202ENST00000589219 SH3D19Q5HYK7 790 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 ODR4Q5SWX8 454 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 C10orf76Q5T2E6 689 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 SLC30A10Q6XR72 485 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 GBP6Q6ZN66 633 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 ZNF720Q7Z2F6 126 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 C12orf56Q8IXR9 622 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 DOCK3Q8IZD9 2030 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 CPXCR1Q8N123 301 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 RNF10Q8N5U6 811 aaKnown RBP10.88□□□□□ -0.67
VPS25-202ENST00000589219 ANKRD13CQ8N6S4 541 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 BANK1Q8NDB2 785 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 PXYLP1Q8TE99 480 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 TMEM174Q8WUU8 243 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 GPRASP2Q96D09 838 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 DRC1Q96MC2 740 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 TRERF1Q96PN7 1200 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 FIZ1Q96SL8 496 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 PDCD2LQ9BRP1 358 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 LACRTQ9GZZ8 138 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 TMEM206Q9H813 350 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 PXMP2Q9NR77 195 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 FAM53CQ9NYF3 392 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 LARSQ9P2J5 1176 aaKnown RBP10.88□□□□□ -0.67
VPS25-202ENST00000589219 JRKLQ9Y4A0 524 aa10.88□□□□□ -0.67
VPS25-202ENST00000589219 K7ENM7 598 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 DDX39AO00148 427 aaKnown RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 ATP2A1O14983 1001 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 MAFGO15525 162 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 DHX15O43143 795 aaKnown RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 N4BP1O75113 896 aaKnown RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 STAM2O75886 525 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 GFPT2O94808 682 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 ZRANB2O95218 330 aaKnown RBP eCLIP10.87□□□□□ -0.67
VPS25-202ENST00000589219 ABL1P00519 1130 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 ATP1A1P05023 1023 aaKnown RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 EIF2AK2P19525 551 aaKnown RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 MCM3P25205 808 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 NMT1P30419 496 aaKnown RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 PRKCIP41743 596 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 RARRES1P49788 294 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 MRPS9P82933 396 aaKnown RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 CYP27A1Q02318 531 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 KLHL30Q0D2K2 578 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 ITGB3BPQ13352 177 aaPredicted RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 SLC18A3Q16572 532 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 HABP4Q5JVS0 413 aaKnown RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 TREML2Q5T2D2 321 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 KLHDC7AQ5VTJ3 777 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 ARHGEF16Q5VV41 709 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 ZNF746Q6NUN9 644 aaPredicted RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 NLRX1Q86UT6 975 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 C4orf19Q8IY42 314 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 REPS2Q8NFH8 660 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 SP7Q8TDD2 431 aaPredicted RBP10.87□□□□□ -0.67
VPS25-202ENST00000589219 RUBCNQ92622 972 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 SLC35C1Q96A29 364 aa10.87□□□□□ -0.67
VPS25-202ENST00000589219 HVCN1Q96D96 273 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms