RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 COLQQ9Y215 455 aaPredicted RBP13.25□□□□□ -0.29
CCBE1-203ENST00000589116 AKR1B15C9JRZ8 316 aaPredicted RBP13.24□□□□□ -0.29
CCBE1-203ENST00000589116 GAS2O43903 313 aaKnown RBP13.24□□□□□ -0.29
CCBE1-203ENST00000589116 EPB41P11171 864 aaKnown RBP13.24□□□□□ -0.29
CCBE1-203ENST00000589116 SKILP12757 684 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 PTPN21Q16825 1174 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 SLC9A9Q8IVB4 645 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 C12orf56Q8IXR9 622 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 SYCP3Q8IZU3 236 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 PPTC7Q8NI37 304 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 NPLOC4Q8TAT6 608 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 ATP8B4Q8TF62 1192 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 GLG1Q92896 1179 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 COPS5Q92905 334 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 CCDC51Q96ER9 411 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 IFT74Q96LB3 600 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 CEP89Q96ST8 783 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 NUP58Q9BVL2 599 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 AGPAT3Q9NRZ7 376 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 PYCARDQ9ULZ3 195 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 EXOC7Q9UPT5 735 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 MFAP3LO75121 409 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 GYPCP04921 128 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 CLCN1P35523 988 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 NPTX2P47972 431 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 CRHR2Q13324 411 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 ACVR2BQ13705 512 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 PPP2R5AQ15172 486 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 DUSP28Q4G0W2 176 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 IQSEC1Q6DN90 963 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 TC2NQ8N9U0 490 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 TMEM161BQ8NDZ6 487 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 USP6NLQ92738 828 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 PANX2Q96RD6 677 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 POLR3FQ9H1D9 316 aaPredicted RBP13.24□□□□□ -0.29
CCBE1-203ENST00000589116 TMX1Q9H3N1 280 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 RRAGDQ9NQL2 400 aaPredicted RBP13.24□□□□□ -0.29
CCBE1-203ENST00000589116 KMT5AQ9NQR1 393 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 ARMCX3Q9UH62 379 aaPredicted RBP13.24□□□□□ -0.29
CCBE1-203ENST00000589116 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCBE1-203ENST00000589116 MGAMO43451 1857 aa13.24□□□□□ -0.29
CCBE1-203ENST00000589116 DOCK3Q8IZD9 2030 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 CCDC169A6NNP5 214 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 GPR25O00155 361 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 SLC16A4O15374 487 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 RGS2P41220 211 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 ADCYAP1R1P41586 468 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 RBL2Q08999 1139 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 FIGNQ5HY92 759 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 OLFML2BQ68BL8 750 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 MAP4K3Q8IVH8 894 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 APBA2Q99767 749 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 JPH2Q9BR39 696 aaPredicted RBP13.23□□□□□ -0.29
CCBE1-203ENST00000589116 DMAC2Q9NW81 257 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 SIP14410 1827 aa13.23□□□□□ -0.29
CCBE1-203ENST00000589116 HBP1O60381 514 aa13.22□□□□□ -0.29
CCBE1-203ENST00000589116 MAFO75444 373 aaPredicted RBP13.22□□□□□ -0.29
CCBE1-203ENST00000589116 AKAP3O75969 853 aa13.22□□□□□ -0.29
CCBE1-203ENST00000589116 CASP14P31944 242 aa13.22□□□□□ -0.29
CCBE1-203ENST00000589116 PSMC2P35998 433 aaKnown RBP13.22□□□□□ -0.29
CCBE1-203ENST00000589116 NAMPTP43490 491 aa13.22□□□□□ -0.29
CCBE1-203ENST00000589116 PLCB4Q15147 1175 aa13.22□□□□□ -0.29
CCBE1-203ENST00000589116 SYCP1Q15431 976 aa13.22□□□□□ -0.29
CCBE1-203ENST00000589116 BSNDQ8WZ55 320 aa13.22□□□□□ -0.29
CCBE1-203ENST00000589116 NAA15Q9BXJ9 866 aaKnown RBP13.22□□□□□ -0.29
CCBE1-203ENST00000589116 ERAP1Q9NZ08 941 aa13.22□□□□□ -0.29
CCBE1-203ENST00000589116 ARHGAP28Q9P2N2 729 aa13.22□□□□□ -0.29
CCBE1-203ENST00000589116 ZHX1Q9UKY1 873 aaPredicted RBP13.22□□□□□ -0.29
CCBE1-203ENST00000589116 TBX20Q9UMR3 447 aa13.22□□□□□ -0.29
CCBE1-203ENST00000589116 DENND3A2RUS2 1198 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 TNPO2O14787 897 aaKnown RBP13.21□□□□□ -0.29
CCBE1-203ENST00000589116 CLIC2O15247 247 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 STX10O60499 249 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 FKTNO75072 461 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 XRCC5P13010 732 aaKnown RBP13.21□□□□□ -0.29
CCBE1-203ENST00000589116 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.29
CCBE1-203ENST00000589116 ARL2P36404 184 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 ADKP55263 362 aaKnown RBP13.21□□□□□ -0.29
CCBE1-203ENST00000589116 CEP135Q66GS9 1140 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 TRIM50Q86XT4 487 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 KSR1Q8IVT5 923 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 TCP11Q8WWU5 503 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 BAG1Q99933 345 aaPredicted RBP13.21□□□□□ -0.29
CCBE1-203ENST00000589116 TTYH3Q9C0H2 523 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 KCND1Q9NSA2 647 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 SPTLC3Q9NUV7 552 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 FRMD4BQ9Y2L6 1034 aa13.21□□□□□ -0.29
CCBE1-203ENST00000589116 A0A1W2PQJ5 194 aa13.21□□□□□ -0.3
CCBE1-203ENST00000589116 MAPK13O15264 365 aa13.21□□□□□ -0.3
CCBE1-203ENST00000589116 ARHGAP6O43182 974 aa13.21□□□□□ -0.3
CCBE1-203ENST00000589116 PPFIA4O75335 1185 aa13.21□□□□□ -0.3
CCBE1-203ENST00000589116 LGALS2P05162 132 aa13.21□□□□□ -0.3
CCBE1-203ENST00000589116 TRIM21P19474 475 aaKnown RBP13.21□□□□□ -0.3
CCBE1-203ENST00000589116 FECHP22830 423 aa13.21□□□□□ -0.3
CCBE1-203ENST00000589116 NOLC1Q14978 699 aaKnown RBP eCLIP13.21□□□□□ -0.3
CCBE1-203ENST00000589116 TMEM63BQ5T3F8 832 aa13.21□□□□□ -0.3
CCBE1-203ENST00000589116 IER5Q5VY09 327 aa13.21□□□□□ -0.3
CCBE1-203ENST00000589116 TMEM139Q8IV31 216 aa13.21□□□□□ -0.3
CCBE1-203ENST00000589116 FAM186BQ8IYM0 893 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms