RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 AP3M2P53677 418 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 YWHAHQ04917 246 aaPredicted RBP17.04■□□□□ 0.32
PTPRS-205ENST00000588012 KRT39Q6A163 491 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 FRA10AC1Q70Z53 315 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 CDC26Q8NHZ8 85 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 WHAMMQ8TF30 809 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 ZMYND12Q9H0C1 365 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 TRPM1Q7Z4N2 1603 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 LGALS16A8MUM7 142 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 ZNF668Q96K58 619 aaPredicted RBP17.04■□□□□ 0.32
PTPRS-205ENST00000588012 GBP5Q96PP8 586 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 FMO2Q99518 471 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 OPHN1O60890 802 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 SDC4P31431 198 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 KCNH2Q12809 1159 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 ACAP3Q96P50 834 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 FAM217BQ9NTX9 383 aaPredicted RBP17.04■□□□□ 0.32
PTPRS-205ENST00000588012 MAP3K20Q9NYL2 800 aaKnown RBP17.04■□□□□ 0.32
PTPRS-205ENST00000588012 ORC6Q9Y5N6 252 aa17.04■□□□□ 0.32
PTPRS-205ENST00000588012 MIF4GDA9UHW6 222 aaKnown RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 RASGRF2O14827 1237 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 ZKSCAN8Q15776 578 aaPredicted RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 TKFCQ3LXA3 575 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 EXT2Q93063 718 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 ZNF560Q96MR9 790 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 OSBPL5Q9H0X9 879 aaPredicted RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 CNOT10Q9H9A5 744 aaKnown RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 JPH1Q9HDC5 661 aaPredicted RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 ERCC6L2Q5T890 1561 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 CREB3O43889 395 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 GRIN3BO60391 1043 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 TXNP10599 105 aaKnown RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 CPB1P15086 417 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 ADORA2BP29275 332 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 ANKRD20A4Q4UJ75 823 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 ANKRD20A8PQ5CZ79 823 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 ANKRD20A2Q5SQ80 823 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 ANKRD20A1Q5TYW2 823 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 DDX27Q96GQ7 796 aaKnown RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 SYNGAP1Q96PV0 1343 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 NBPF26B4DH59 902 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 GNA15P30679 374 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 COG2Q14746 738 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 EPHA7Q15375 998 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 C12orf60Q5U649 245 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 NBPF10Q6P3W6 841 aaKnown RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 NBPF15Q8N660 670 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 RBM46Q8TBY0 533 aaKnown RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 QRICH2Q9H0J4 1663 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 PRCPP42785 496 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 GAS2L3Q86XJ1 694 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 NSUN4Q96CB9 384 aaKnown RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 FGD4Q96M96 766 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 TMEM106CQ9BVX2 250 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 TDP2O95551 362 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 CUL1Q13616 776 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 TAF1CQ15572 869 aaPredicted RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 PDCD6IPQ8WUM4 868 aaKnown RBP17.03■□□□□ 0.32
PTPRS-205ENST00000588012 KIF12Q96FN5 646 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 DAGLAQ9Y4D2 1042 aa17.03■□□□□ 0.32
PTPRS-205ENST00000588012 C19orf81C9J6K1 198 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 NEMP1O14524 444 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 SEC31AO94979 1220 aaKnown RBP17.02■□□□□ 0.32
PTPRS-205ENST00000588012 ARL4CP56559 192 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 TRIM28Q13263 835 aaKnown RBP17.02■□□□□ 0.32
PTPRS-205ENST00000588012 SNAPC2Q13487 334 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 RBAKQ9NYW8 714 aaPredicted RBP17.02■□□□□ 0.32
PTPRS-205ENST00000588012 A8MXQ7 604 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 DRP2Q13474 957 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 R3HDM1Q15032 1099 aaKnown RBP17.02■□□□□ 0.32
PTPRS-205ENST00000588012 PRR5LQ6MZQ0 368 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 CYFIP1Q7L576 1253 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 SAAL1Q96ER3 474 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 C11orf70Q9BRQ4 267 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 PODXLO00592 558 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 ATP8B1O43520 1251 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 PALMO75781 387 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 ATP1A3P13637 1013 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 EFNA5P52803 228 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 ATG16L1Q676U5 607 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 PARK7Q99497 189 aaKnown RBP17.02■□□□□ 0.32
PTPRS-205ENST00000588012 TUFT1Q9NNX1 390 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 HACD3Q9P035 362 aa17.02■□□□□ 0.32
PTPRS-205ENST00000588012 CDC42BPAQ5VT25 1732 aa17.02■□□□□ 0.31
PTPRS-205ENST00000588012 LRRC53A6NM62 1247 aa17.02■□□□□ 0.31
PTPRS-205ENST00000588012 MGEA5O60502 916 aa17.02■□□□□ 0.31
PTPRS-205ENST00000588012 EIF3BP55884 814 aaKnown RBP17.02■□□□□ 0.31
PTPRS-205ENST00000588012 C1orf167Q5SNV9 1468 aa17.02■□□□□ 0.31
PTPRS-205ENST00000588012 MYBL1P10243 752 aa17.02■□□□□ 0.31
PTPRS-205ENST00000588012 RFC1P35251 1148 aaPredicted RBP17.02■□□□□ 0.31
PTPRS-205ENST00000588012 NSUN2Q08J23 767 aaKnown RBP eCLIP17.02■□□□□ 0.31
PTPRS-205ENST00000588012 VEPH1Q14D04 833 aa17.02■□□□□ 0.31
PTPRS-205ENST00000588012 TMCO4Q5TGY1 634 aa17.02■□□□□ 0.31
PTPRS-205ENST00000588012 TRIM68Q6AZZ1 485 aa17.02■□□□□ 0.31
PTPRS-205ENST00000588012 POLD4Q9HCU8 107 aa17.02■□□□□ 0.31
PTPRS-205ENST00000588012 CYP26B1Q9NR63 512 aa17.02■□□□□ 0.31
PTPRS-205ENST00000588012 FARP1Q9Y4F1 1045 aaPredicted RBP17.02■□□□□ 0.31
PTPRS-205ENST00000588012 KDM6AO15550 1401 aaPredicted RBP17.02■□□□□ 0.31
PTPRS-205ENST00000588012 ARHGEF40Q8TER5 1519 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms