RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 ABI1Q8IZP0 508 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 HELQQ8TDG4 1101 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 NLRP4Q96MN2 994 aa16.09■□□□□ 0.17
VMP1-206ENST00000587945 BARX2Q9UMQ3 279 aaPredicted RBP16.09■□□□□ 0.17
VMP1-206ENST00000587945 MARCH6O60337 910 aa16.08■□□□□ 0.16
VMP1-206ENST00000587945 GCFC2P16383 781 aaKnown RBP16.08■□□□□ 0.16
VMP1-206ENST00000587945 LONRF3Q496Y0 759 aa16.08■□□□□ 0.16
VMP1-206ENST00000587945 PLPP4Q5VZY2 271 aa16.08■□□□□ 0.16
VMP1-206ENST00000587945 KCNT2Q6UVM3 1135 aa16.08■□□□□ 0.16
VMP1-206ENST00000587945 ZNF598Q86UK7 904 aaKnown RBP16.08■□□□□ 0.16
VMP1-206ENST00000587945 LRRC43Q8N309 656 aa16.08■□□□□ 0.16
VMP1-206ENST00000587945 VN1R2Q8NFZ6 395 aa16.08■□□□□ 0.16
VMP1-206ENST00000587945 CYP26B1Q9NR63 512 aa16.08■□□□□ 0.16
VMP1-206ENST00000587945 BMP2KQ9NSY1 1161 aaPredicted RBP16.08■□□□□ 0.16
VMP1-206ENST00000587945 RGL1Q9NZL6 768 aa16.08■□□□□ 0.16
VMP1-206ENST00000587945 EVPLQ92817 2033 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 FSCN2O14926 492 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 EYA4O95677 639 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 P4HBP07237 508 aaKnown RBP16.07■□□□□ 0.16
VMP1-206ENST00000587945 KRT2P35908 639 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 CDC42EP1Q00587 391 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 PLCB3Q01970 1234 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 CSPP1Q1MSJ5 1256 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 NCAPH2Q6IBW4 605 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 MRPS27Q92552 414 aaKnown RBP16.07■□□□□ 0.16
VMP1-206ENST00000587945 WASF1Q92558 559 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 LPPQ93052 612 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 DYDC2Q96IM9 177 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 CEP170P1Q96L14 293 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 ZNF558Q96NG5 402 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 TCF25Q9BQ70 676 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 DACT1Q9NYF0 836 aa16.07■□□□□ 0.16
VMP1-206ENST00000587945 LOXHD1Q8IVV2 1947 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 ZBTB39O15060 712 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 DCXO43602 365 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 JAK2O60674 1132 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 SEC24BO95487 1268 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 EOMESO95936 686 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 ALADP13716 330 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 SFPQP23246 707 aaKnown RBP eCLIP16.06■□□□□ 0.16
VMP1-206ENST00000587945 PHKA2P46019 1235 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 CTTNQ14247 550 aaKnown RBP16.06■□□□□ 0.16
VMP1-206ENST00000587945 EPHA7Q15375 998 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 DUSP6Q16828 381 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 TWF2Q6IBS0 349 aaKnown RBP16.06■□□□□ 0.16
VMP1-206ENST00000587945 CATSPER4Q7RTX7 472 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 ZNF410Q86VK4 478 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 SMRP1Q8NCR6 262 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 NSUN7Q8NE18 718 aaKnown RBP16.06■□□□□ 0.16
VMP1-206ENST00000587945 TNFRSF25Q93038 417 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 TMEM143Q96AN5 459 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 LXNQ9BS40 222 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 ENTPD7Q9NQZ7 604 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 CHST12Q9NRB3 414 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 PUF60Q9UHX1 559 aaKnown RBP16.06■□□□□ 0.16
VMP1-206ENST00000587945 PIN4Q9Y237 131 aaKnown RBP16.06■□□□□ 0.16
VMP1-206ENST00000587945 LZTS1Q9Y250 596 aa16.06■□□□□ 0.16
VMP1-206ENST00000587945 MEIS3P2A8K0S8 358 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 HIDE1A8MVS5 230 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 NT5C1B-RDH14C9J2C7 533 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 WNT7AO00755 349 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 TBX3O15119 743 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 DKC1O60832 514 aaKnown RBP eCLIP16.05■□□□□ 0.16
VMP1-206ENST00000587945 YWHABP31946 246 aaKnown RBP16.05■□□□□ 0.16
VMP1-206ENST00000587945 NEK4P51957 841 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 POLGP54098 1239 aaPredicted RBP16.05■□□□□ 0.16
VMP1-206ENST00000587945 CYP4A11Q02928 519 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 SPIRE1Q08AE8 756 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 COASYQ13057 564 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 C4orf19Q8IY42 314 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 PRPF31Q8WWY3 499 aaKnown RBP16.05■□□□□ 0.16
VMP1-206ENST00000587945 SLC7A3Q8WY07 619 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 NAP1L4Q99733 375 aaKnown RBP16.05■□□□□ 0.16
VMP1-206ENST00000587945 JPH2Q9BR39 696 aaPredicted RBP16.05■□□□□ 0.16
VMP1-206ENST00000587945 INO80BQ9C086 356 aaPredicted RBP16.05■□□□□ 0.16
VMP1-206ENST00000587945 DHX33Q9H6R0 707 aaKnown RBP16.05■□□□□ 0.16
VMP1-206ENST00000587945 IFT122Q9HBG6 1241 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 BRMS1Q9HCU9 246 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 SPG21Q9NZD8 308 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 USP15Q9Y4E8 981 aaPredicted RBP16.05■□□□□ 0.16
VMP1-206ENST00000587945 COL4A3BPQ9Y5P4 624 aa16.05■□□□□ 0.16
VMP1-206ENST00000587945 MYH9P35579 1960 aaKnown RBP16.04■□□□□ 0.16
VMP1-206ENST00000587945 ATG2AQ2TAZ0 1938 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 BTBD18B2RXH4 712 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 BAG4O95429 457 aaKnown RBP16.04■□□□□ 0.16
VMP1-206ENST00000587945 SRGAP2CP0DJJ0 459 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 BCAR1P56945 870 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 KRT17Q04695 432 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 ST3GAL1Q11201 340 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 PDE12Q6L8Q7 609 aaKnown RBP16.04■□□□□ 0.16
VMP1-206ENST00000587945 LLGL2Q6P1M3 1020 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 TPH2Q8IWU9 490 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 SLC39A11Q8N1S5 342 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 POP1Q99575 1024 aaKnown RBP16.04■□□□□ 0.16
VMP1-206ENST00000587945 CDCA3Q99618 268 aaPredicted RBP16.04■□□□□ 0.16
VMP1-206ENST00000587945 MINDY3Q9H8M7 445 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 FAM105AQ9NUU6 356 aa16.04■□□□□ 0.16
VMP1-206ENST00000587945 MUTYHQ9UIF7 546 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms