RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 SPPL3Q8TCT6 385 aa22.37■■□□□ 1.17
TRAPPC6A-203ENST00000587818 ADAMTS19Q8TE59 1207 aa22.37■■□□□ 1.17
TRAPPC6A-203ENST00000587818 IFT122Q9HBG6 1241 aa22.37■■□□□ 1.17
TRAPPC6A-203ENST00000587818 BRWD1Q9NSI6 2320 aa22.37■■□□□ 1.17
TRAPPC6A-203ENST00000587818 SPATA31C1P0DKV0 1188 aa22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 LAMTOR4Q0VGL1 99 aa22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 CAMK1Q14012 370 aa22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 LRRC55Q6ZSA7 311 aa22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 EP400NLQ6ZTU2 488 aa22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 CATSPER4Q7RTX7 472 aa22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 TBC1D32Q96NH3 1257 aa22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 CASD1Q96PB1 797 aa22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 PLVAPQ9BX97 442 aa22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 INO80BQ9C086 356 aaPredicted RBP22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 MINDY3Q9H8M7 445 aa22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 XPNPEP1Q9NQW7 623 aa22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 RNF216Q9NWF9 866 aaPredicted RBP22.36■■□□□ 1.17
TRAPPC6A-203ENST00000587818 SPTBN5Q9NRC6 3674 aaKnown RBP22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 MED24O75448 989 aa22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 LYPLA2O95372 231 aa22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 OR52Z1P0C646 297 aa22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 TOB1P50616 345 aaPredicted RBP22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 AAK1Q2M2I8 961 aa22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 CATSPER3Q86XQ3 398 aa22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 EXOC8Q8IYI6 725 aa22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 C4orf32Q8N8J7 132 aa22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 PSPC1Q8WXF1 523 aaKnown RBP22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 MTRQ99707 1265 aa22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 NSUN3Q9H649 340 aaKnown RBP22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 CWH43Q9H720 699 aa22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 UBE2ZQ9H832 354 aaPredicted RBP22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 ANKEF1Q9NU02 776 aa22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 PPME1Q9Y570 386 aa22.35■■□□□ 1.17
TRAPPC6A-203ENST00000587818 ATG2AQ2TAZ0 1938 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 A0A0U1RQF3 1178 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 KCNA5P22460 613 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 SFPQP23246 707 aaKnown RBP eCLIP22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 U2AF2P26368 475 aaKnown RBP eCLIP22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 GJB2P29033 226 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 TIGD5Q53EQ6 642 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 MCTP1Q6DN14 999 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 ZNF598Q86UK7 904 aaKnown RBP22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 FERMT3Q86UX7 667 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 NEK9Q8TD19 979 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 HELQQ8TDG4 1101 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 POF1BQ8WVV4 589 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 TCP11Q8WWU5 503 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 LPPQ93052 612 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 P2RX5Q93086 422 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 TMEM117Q9H0C3 514 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 LMAN2LQ9H0V9 348 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 IGFLR1Q9H665 355 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 CHST12Q9NRB3 414 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 NOL7Q9UMY1 257 aaKnown RBP22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 PIN4Q9Y237 131 aaKnown RBP22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 PCDHB6Q9Y5E3 794 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 ARID2Q68CP9 1835 aa22.34■■□□□ 1.17
TRAPPC6A-203ENST00000587818 ATF7P17544 494 aaPredicted RBP22.33■■□□□ 1.17
TRAPPC6A-203ENST00000587818 GTF2F1P35269 517 aaKnown RBP eCLIP22.33■■□□□ 1.17
TRAPPC6A-203ENST00000587818 IRS1P35568 1242 aa22.33■■□□□ 1.17
TRAPPC6A-203ENST00000587818 CLLU1OSQ5K130 101 aa22.33■■□□□ 1.17
TRAPPC6A-203ENST00000587818 TWF2Q6IBS0 349 aaKnown RBP22.33■■□□□ 1.17
TRAPPC6A-203ENST00000587818 MAEAQ7L5Y9 396 aa22.33■■□□□ 1.17
TRAPPC6A-203ENST00000587818 RNF149Q8NC42 400 aa22.33■■□□□ 1.17
TRAPPC6A-203ENST00000587818 UHRF1Q96T88 793 aaPredicted RBP22.33■■□□□ 1.17
TRAPPC6A-203ENST00000587818 DACT1Q9NYF0 836 aa22.33■■□□□ 1.17
TRAPPC6A-203ENST00000587818 PCDHB12Q9Y5F1 795 aa22.33■■□□□ 1.17
TRAPPC6A-203ENST00000587818 PCDHGC5Q9Y5F6 944 aa22.33■■□□□ 1.17
TRAPPC6A-203ENST00000587818 ASAP2O43150 1006 aa22.32■■□□□ 1.16
TRAPPC6A-203ENST00000587818 PHKA2P46019 1235 aa22.32■■□□□ 1.16
TRAPPC6A-203ENST00000587818 RARRES1P49788 294 aa22.32■■□□□ 1.16
TRAPPC6A-203ENST00000587818 NAALADL2Q58DX5 795 aa22.32■■□□□ 1.16
TRAPPC6A-203ENST00000587818 SRGAP1Q7Z6B7 1085 aa22.32■■□□□ 1.16
TRAPPC6A-203ENST00000587818 ABI1Q8IZP0 508 aa22.32■■□□□ 1.16
TRAPPC6A-203ENST00000587818 COLGALT1Q8NBJ5 622 aa22.32■■□□□ 1.16
TRAPPC6A-203ENST00000587818 ASAP3Q8TDY4 903 aa22.32■■□□□ 1.16
TRAPPC6A-203ENST00000587818 CCDC43Q96MW1 224 aaKnown RBP22.32■■□□□ 1.16
TRAPPC6A-203ENST00000587818 PLXNA4Q9HCM2 1894 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 MEIS3P2A8K0S8 358 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 H3BQ06 376 aaPredicted RBP22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 EOMESO95936 686 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 PBX3P40426 434 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 TRAPPC10P48553 1259 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 HYAL1Q12794 435 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 PTGDRQ13258 359 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 THNSL1Q8IYQ7 743 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 POLR3CQ9BUI4 534 aaPredicted RBP22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 TUFT1Q9NNX1 390 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 AAASQ9NRG9 546 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 CLDND1Q9NY35 253 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 VCANP13611 3396 aa22.31■■□□□ 1.16
TRAPPC6A-203ENST00000587818 TTC28Q96AY4 2481 aa22.3■■□□□ 1.16
TRAPPC6A-203ENST00000587818 HOXA2O43364 376 aa22.3■■□□□ 1.16
TRAPPC6A-203ENST00000587818 USO1O60763 962 aaKnown RBP22.3■■□□□ 1.16
TRAPPC6A-203ENST00000587818 DGAT1O75907 488 aa22.3■■□□□ 1.16
TRAPPC6A-203ENST00000587818 XRCC6P12956 609 aaKnown RBP eCLIP22.3■■□□□ 1.16
TRAPPC6A-203ENST00000587818 ARL2P36404 184 aa22.3■■□□□ 1.16
TRAPPC6A-203ENST00000587818 ECM1Q16610 540 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms