RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 IFT122Q9HBG6 1241 aa26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 DBR1Q9UK59 544 aaKnown RBP26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 MTCH2Q9Y6C9 303 aa26.16■■□□□ 1.78
CHAF1A-205ENST00000587580 SRGAP2CP0DJJ0 459 aa26.15■■□□□ 1.78
CHAF1A-205ENST00000587580 POU3F3P20264 500 aaPredicted RBP26.15■■□□□ 1.78
CHAF1A-205ENST00000587580 PDIA5Q14554 519 aa26.15■■□□□ 1.78
CHAF1A-205ENST00000587580 DTHD1Q6ZMT9 781 aa26.15■■□□□ 1.78
CHAF1A-205ENST00000587580 BRAPQ7Z569 592 aa26.15■■□□□ 1.78
CHAF1A-205ENST00000587580 SNX29Q8TEQ0 813 aa26.15■■□□□ 1.78
CHAF1A-205ENST00000587580 SNX21Q969T3 373 aa26.15■■□□□ 1.78
CHAF1A-205ENST00000587580 STK24Q9Y6E0 443 aa26.15■■□□□ 1.78
CHAF1A-205ENST00000587580 ASAP2O43150 1006 aa26.14■■□□□ 1.78
CHAF1A-205ENST00000587580 MUTP22033 750 aa26.14■■□□□ 1.78
CHAF1A-205ENST00000587580 CTNNB1P35222 781 aa26.14■■□□□ 1.78
CHAF1A-205ENST00000587580 IL17AQ16552 155 aa26.14■■□□□ 1.78
CHAF1A-205ENST00000587580 CATSPER4Q7RTX7 472 aa26.14■■□□□ 1.78
CHAF1A-205ENST00000587580 RNF149Q8NC42 400 aa26.14■■□□□ 1.78
CHAF1A-205ENST00000587580 ELAC1Q9H777 363 aaKnown RBP26.14■■□□□ 1.78
CHAF1A-205ENST00000587580 TMEM161AQ9NX61 479 aa26.14■■□□□ 1.78
CHAF1A-205ENST00000587580 RWDD3Q9Y3V2 267 aa26.14■■□□□ 1.78
CHAF1A-205ENST00000587580 KIAA1671Q9BY89 1806 aa26.14■■□□□ 1.77
CHAF1A-205ENST00000587580 FNDC1Q4ZHG4 1894 aaPredicted RBP26.13■■□□□ 1.77
CHAF1A-205ENST00000587580 LINC00271P0C7V0 271 aa26.13■■□□□ 1.77
CHAF1A-205ENST00000587580 FAM189BP81408 668 aa26.13■■□□□ 1.77
CHAF1A-205ENST00000587580 MXD4Q14582 209 aaPredicted RBP26.13■■□□□ 1.77
CHAF1A-205ENST00000587580 ECM1Q16610 540 aa26.13■■□□□ 1.77
CHAF1A-205ENST00000587580 SRGAP1Q7Z6B7 1085 aa26.13■■□□□ 1.77
CHAF1A-205ENST00000587580 CHST12Q9NRB3 414 aa26.13■■□□□ 1.77
CHAF1A-205ENST00000587580 DACT1Q9NYF0 836 aa26.13■■□□□ 1.77
CHAF1A-205ENST00000587580 PIN4Q9Y237 131 aaKnown RBP26.13■■□□□ 1.77
CHAF1A-205ENST00000587580 MRPL42Q9Y6G3 142 aaKnown RBP26.13■■□□□ 1.77
CHAF1A-205ENST00000587580 EYSQ5T1H1 3165 aa26.13■■□□□ 1.77
CHAF1A-205ENST00000587580 PRRC2BQ5JSZ5 2229 aaKnown RBP26.12■■□□□ 1.77
CHAF1A-205ENST00000587580 ARHGEF35A5YM69 484 aa26.12■■□□□ 1.77
CHAF1A-205ENST00000587580 PP2D1A8MPX8 630 aa26.12■■□□□ 1.77
CHAF1A-205ENST00000587580 PHKA2P46019 1235 aa26.12■■□□□ 1.77
CHAF1A-205ENST00000587580 FAM102BQ5T8I3 360 aa26.12■■□□□ 1.77
CHAF1A-205ENST00000587580 ECHDC2Q86YB7 292 aa26.12■■□□□ 1.77
CHAF1A-205ENST00000587580 HSCBQ8IWL3 235 aa26.12■■□□□ 1.77
CHAF1A-205ENST00000587580 ASAP3Q8TDY4 903 aa26.12■■□□□ 1.77
CHAF1A-205ENST00000587580 CLP1Q92989 425 aaKnown RBP26.12■■□□□ 1.77
CHAF1A-205ENST00000587580 POLR3FQ9H1D9 316 aaPredicted RBP26.12■■□□□ 1.77
CHAF1A-205ENST00000587580 TBKBP1A7MCY6 615 aa26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 FGFR1P11362 822 aa26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 SYT1P21579 422 aa26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 ARL2P36404 184 aa26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 GPM6BQ13491 265 aa26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 TFDP1Q14186 410 aa26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 KRT79Q5XKE5 535 aa26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 MAEAQ7L5Y9 396 aa26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 MINDY3Q9H8M7 445 aa26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 DDX19AQ9NUU7 478 aaKnown RBP26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 KIAA1024Q9UPX6 916 aa26.11■■□□□ 1.77
CHAF1A-205ENST00000587580 H3BNC9 293 aa26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 GLRA2P23416 452 aa26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 CDC25AP30304 524 aa26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 BMPR1AP36894 532 aa26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 CAPSQ13938 189 aa26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 TWF2Q6IBS0 349 aaKnown RBP26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 PADI6Q6TGC4 694 aa26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 RNF169Q8NCN4 708 aa26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 MCPH1Q8NEM0 835 aa26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 GPRC5CQ9NQ84 441 aa26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 AGPAT5Q9NUQ2 364 aa26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 LMCD1Q9NZU5 365 aa26.1■■□□□ 1.77
CHAF1A-205ENST00000587580 A0A0U1RQF3 1178 aa26.09■■□□□ 1.77
CHAF1A-205ENST00000587580 VWA3AA6NCI4 1184 aa26.09■■□□□ 1.77
CHAF1A-205ENST00000587580 C5orf67F2Z3F1 127 aa26.09■■□□□ 1.77
CHAF1A-205ENST00000587580 HOXA2O43364 376 aa26.09■■□□□ 1.77
CHAF1A-205ENST00000587580 ARL6IP4Q66PJ3 421 aaKnown RBP26.09■■□□□ 1.77
CHAF1A-205ENST00000587580 BHMT2Q9H2M3 363 aa26.09■■□□□ 1.77
CHAF1A-205ENST00000587580 RB1P06400 928 aa26.08■■□□□ 1.77
CHAF1A-205ENST00000587580 PTENP60484 403 aa26.08■■□□□ 1.77
CHAF1A-205ENST00000587580 MMTAG2Q9BU76 263 aaKnown RBP26.08■■□□□ 1.77
CHAF1A-205ENST00000587580 C11orf84Q9BUA3 381 aaPredicted RBP26.08■■□□□ 1.77
CHAF1A-205ENST00000587580 PRDM6Q9NQX0 595 aa26.08■■□□□ 1.77
CHAF1A-205ENST00000587580 RNF19AQ9NV58 838 aa26.08■■□□□ 1.77
CHAF1A-205ENST00000587580 TRANK1O15050 2925 aa26.07■■□□□ 1.76
CHAF1A-205ENST00000587580 ERLIN2O94905 339 aa26.07■■□□□ 1.76
CHAF1A-205ENST00000587580 BMP15O95972 392 aa26.07■■□□□ 1.76
CHAF1A-205ENST00000587580 POU5F1BQ06416 359 aa26.07■■□□□ 1.76
CHAF1A-205ENST00000587580 RESTQ13127 1097 aa26.07■■□□□ 1.76
CHAF1A-205ENST00000587580 TRAIPQ9BWF2 469 aa26.07■■□□□ 1.76
CHAF1A-205ENST00000587580 TMEM117Q9H0C3 514 aa26.07■■□□□ 1.76
CHAF1A-205ENST00000587580 INO80B-WBP1J3KQ70 363 aa26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 ATF7P17544 494 aaPredicted RBP26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 CYP11B2P19099 503 aa26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 SF3A1Q15459 793 aaKnown RBP26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 SKIV2LQ15477 1246 aaKnown RBP26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 ZRSR1Q15695 479 aaKnown RBP26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 PTPROQ16827 1216 aa26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 SPOUT1Q5T280 376 aaKnown RBP26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 ZNF598Q86UK7 904 aaKnown RBP26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 IFNLR1Q8IU57 520 aaPredicted RBP26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 ABI1Q8IZP0 508 aa26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 PLVAPQ9BX97 442 aa26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 FAM105AQ9NUU6 356 aa26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 MTMR6Q9Y217 621 aa26.06■■□□□ 1.76
CHAF1A-205ENST00000587580 LRRIQ4A6NIV6 560 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms