RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 KRT14P02533 472 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 KRT7P08729 469 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 XPAP23025 273 aaPredicted RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 SOX5P35711 763 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 AARSP49588 968 aaKnown RBP eCLIP13.89□□□□□ -0.19
RNF43-208ENST00000584437 KCNB1Q14721 858 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 KNOP1Q1ED39 458 aaKnown RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 CCNI2Q6ZMN8 369 aaPredicted RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 FAM160B2Q86V87 743 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 NCAPG2Q86XI2 1143 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 SFR1Q86XK3 245 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 LRRC1Q9BTT6 524 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 DDX56Q9NY93 547 aaKnown RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 TEKT2Q9UIF3 430 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 USP15Q9Y4E8 981 aaPredicted RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 GOLGA8IPA6NC78 632 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 GOLGA8JA6NMD2 632 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 K7ERI5 159 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 ATICP31939 592 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 IFNA8P32881 189 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 ZNF211Q13398 564 aaPredicted RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 PPP1R18Q6NYC8 613 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 RASGRP2Q7LDG7 609 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 RHOT1Q8IXI2 618 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 RPF1Q9H9Y2 349 aaKnown RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 GTSE1Q9NYZ3 720 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 ADA2Q9NZK5 511 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 SEL1LQ9UBV2 794 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 SLC13A4Q9UKG4 626 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 APOA1P02647 267 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 KITP10721 976 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 PDIA2Q13087 525 aaKnown RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 TBC1D10BQ4KMP7 808 aaPredicted RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 DNAL1Q4LDG9 190 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 SPICE1Q8N0Z3 855 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 OR9Q1Q8NGQ5 310 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 IP6K2Q9UHH9 426 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 CDK12Q9NYV4 1490 aaPredicted RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 CYP2E1P05181 493 aaPredicted RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 CASP1P29466 404 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 CTTNQ14247 550 aaKnown RBP13.89□□□□□ -0.19
RNF43-208ENST00000584437 FLOT2Q14254 428 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 ZNF667Q5HYK9 610 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 RABGAP1LQ5R372 815 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 ZBTB41Q5SVQ8 909 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 PODNQ7Z5L7 613 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 MTBPQ96DY7 904 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 APOL6Q9BWW8 343 aa13.89□□□□□ -0.19
RNF43-208ENST00000584437 LOC102724159A0A0B4J2E5 919 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 A0A1B0GTH6 734 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 MED21Q13503 144 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 CUL3Q13618 768 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 PWP2Q15269 919 aaKnown RBP13.88□□□□□ -0.19
RNF43-208ENST00000584437 FBXW10Q5XX13 1052 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 MB21D2Q8IYB1 491 aaPredicted RBP13.88□□□□□ -0.19
RNF43-208ENST00000584437 PPCSQ9HAB8 311 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 UBN1Q9NPG3 1134 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 PITPNM2Q9BZ72 1349 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 TCP11X1B4DZS4 312 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 USP17L8P0C7I0 530 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 SERPINB10P48595 397 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 GPS1Q13098 491 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 MTERF2Q49AM1 385 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 IZUMO3Q5VZ72 239 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 TRIM72Q6ZMU5 477 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 TTLL11Q8NHH1 800 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 IL17RAQ96F46 866 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 GJB4Q9NTQ9 266 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 ZNF189O75820 626 aaPredicted RBP13.88□□□□□ -0.19
RNF43-208ENST00000584437 KCTD2Q14681 263 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 DOK7Q18PE1 504 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 NAALADL2Q58DX5 795 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 ENOSF1Q7L5Y1 443 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 ZBED8Q8IZ13 594 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 E9PMD0 336 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 DNAJC6O75061 913 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 FTLP02792 175 aaPredicted RBP13.88□□□□□ -0.19
RNF43-208ENST00000584437 DRAP1Q14919 205 aaPredicted RBP13.88□□□□□ -0.19
RNF43-208ENST00000584437 TSGA10IPQ3SY00 556 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 FAM20AQ96MK3 541 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 KLHL8Q9P2G9 620 aaPredicted RBP13.88□□□□□ -0.19
RNF43-208ENST00000584437 HPCAL4Q9UM19 191 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
RNF43-208ENST00000584437 ZNF711Q9Y462 761 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 ATP10AO60312 1499 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 TMEM2Q9UHN6 1383 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 TMEM247A6NEH6 219 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 ZNF18P17022 549 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 TBXAS1P24557 533 aaPredicted RBP13.88□□□□□ -0.19
RNF43-208ENST00000584437 JAK3P52333 1124 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 RASGRF1Q13972 1273 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 NCAPHQ15003 741 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 SHC4Q6S5L8 630 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 SGSM3Q96HU1 749 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 MTRQ99707 1265 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 TTC7AQ9ULT0 858 aaPredicted RBP13.88□□□□□ -0.19
RNF43-208ENST00000584437 SATB2Q9UPW6 733 aa13.88□□□□□ -0.19
RNF43-208ENST00000584437 ERVV-1B6SEH8 477 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 PI4K2BG5E9Z4 385 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms