RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 ADGRA3Q8IWK6 1321 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 LAD1O00515 517 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 DGAT1O75907 488 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 DGKIO75912 1065 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 FGFR1P11362 822 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 ERVK-21P61565 698 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 CEBPZQ03701 1054 aaKnown RBP18.77■□□□□ 0.6
TSEN54-211ENST00000583818 GRIN1Q05586 938 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 GRB10Q13322 594 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 BTG3Q14201 252 aaPredicted RBP18.77■□□□□ 0.6
TSEN54-211ENST00000583818 PDIA5Q14554 519 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 SF3A1Q15459 793 aaKnown RBP18.77■□□□□ 0.6
TSEN54-211ENST00000583818 FAM102BQ5T8I3 360 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 SLC24A5Q71RS6 500 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 EXOC8Q8IYI6 725 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 RNF169Q8NCN4 708 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 TCP11Q8WWU5 503 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 ZNF689Q96CS4 500 aaPredicted RBP18.77■□□□□ 0.6
TSEN54-211ENST00000583818 POLR3FQ9H1D9 316 aaPredicted RBP18.77■□□□□ 0.6
TSEN54-211ENST00000583818 DBR1Q9UK59 544 aaKnown RBP18.77■□□□□ 0.6
TSEN54-211ENST00000583818 PCDHB7Q9Y5E2 793 aa18.77■□□□□ 0.6
TSEN54-211ENST00000583818 NLRC5Q86WI3 1866 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 ARHGEF35A5YM69 484 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 E9PMD0 336 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 LPXNO60711 386 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 ZSCAN20P17040 1043 aaPredicted RBP18.76■□□□□ 0.59
TSEN54-211ENST00000583818 GLRA2P23416 452 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 CAPSQ13938 189 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 LONRF3Q496Y0 759 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 PADI6Q6TGC4 694 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 CATSPER4Q7RTX7 472 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 KCNK18Q7Z418 384 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 ZNF710Q8N1W2 664 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 FIBCD1Q8N539 461 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 RAB34Q9BZG1 259 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 BHMT2Q9H2M3 363 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 HCSTQ9UBK5 93 aa18.76■□□□□ 0.59
TSEN54-211ENST00000583818 PIN4Q9Y237 131 aaKnown RBP18.76■□□□□ 0.59
TSEN54-211ENST00000583818 PRRC2BQ5JSZ5 2229 aaKnown RBP18.76■□□□□ 0.59
TSEN54-211ENST00000583818 UNC80Q8N2C7 3258 aa18.75■□□□□ 0.59
TSEN54-211ENST00000583818 STX6O43752 255 aa18.75■□□□□ 0.59
TSEN54-211ENST00000583818 GAS2O43903 313 aaKnown RBP18.75■□□□□ 0.59
TSEN54-211ENST00000583818 HSP90AA1P07900 732 aaKnown RBP18.75■□□□□ 0.59
TSEN54-211ENST00000583818 LINC00271P0C7V0 271 aa18.75■□□□□ 0.59
TSEN54-211ENST00000583818 STAG3L1P0CL83 205 aa18.75■□□□□ 0.59
TSEN54-211ENST00000583818 XRCC6P12956 609 aaKnown RBP eCLIP18.75■□□□□ 0.59
TSEN54-211ENST00000583818 SFPQP23246 707 aaKnown RBP eCLIP18.75■□□□□ 0.59
TSEN54-211ENST00000583818 ARL2P36404 184 aa18.75■□□□□ 0.59
TSEN54-211ENST00000583818 CDC42EP1Q00587 391 aa18.75■□□□□ 0.59
TSEN54-211ENST00000583818 EPC2Q52LR7 807 aa18.75■□□□□ 0.59
TSEN54-211ENST00000583818 KRT79Q5XKE5 535 aa18.75■□□□□ 0.59
TSEN54-211ENST00000583818 FBXO22Q8NEZ5 403 aa18.75■□□□□ 0.59
TSEN54-211ENST00000583818 C1orf112Q9NSG2 853 aa18.75■□□□□ 0.59
TSEN54-211ENST00000583818 MRPL42Q9Y6G3 142 aaKnown RBP18.75■□□□□ 0.59
TSEN54-211ENST00000583818 TBKBP1A7MCY6 615 aa18.74■□□□□ 0.59
TSEN54-211ENST00000583818 CSPG5O95196 566 aa18.74■□□□□ 0.59
TSEN54-211ENST00000583818 CTNNB1P35222 781 aa18.74■□□□□ 0.59
TSEN54-211ENST00000583818 FAM189BP81408 668 aa18.74■□□□□ 0.59
TSEN54-211ENST00000583818 ECHDC2Q86YB7 292 aa18.74■□□□□ 0.59
TSEN54-211ENST00000583818 TMEM192Q8IY95 271 aa18.74■□□□□ 0.59
TSEN54-211ENST00000583818 BSNDQ8WZ55 320 aa18.74■□□□□ 0.59
TSEN54-211ENST00000583818 PNMA5Q96PV4 448 aa18.74■□□□□ 0.59
TSEN54-211ENST00000583818 PRDM6Q9NQX0 595 aa18.74■□□□□ 0.59
TSEN54-211ENST00000583818 MTCH2Q9Y6C9 303 aa18.74■□□□□ 0.59
TSEN54-211ENST00000583818 KIAA1671Q9BY89 1806 aa18.74■□□□□ 0.59
TSEN54-211ENST00000583818 MARCKSP29966 332 aaPredicted RBP18.73■□□□□ 0.59
TSEN54-211ENST00000583818 PHKA2P46019 1235 aa18.73■□□□□ 0.59
TSEN54-211ENST00000583818 TWF2Q6IBS0 349 aaKnown RBP18.73■□□□□ 0.59
TSEN54-211ENST00000583818 SRGAP1Q7Z6B7 1085 aa18.73■□□□□ 0.59
TSEN54-211ENST00000583818 LPPQ93052 612 aa18.73■□□□□ 0.59
TSEN54-211ENST00000583818 INO80BQ9C086 356 aaPredicted RBP18.73■□□□□ 0.59
TSEN54-211ENST00000583818 RNF19AQ9NV58 838 aa18.73■□□□□ 0.59
TSEN54-211ENST00000583818 TMEM161AQ9NX61 479 aa18.73■□□□□ 0.59
TSEN54-211ENST00000583818 FNDC1Q4ZHG4 1894 aaPredicted RBP18.73■□□□□ 0.59
TSEN54-211ENST00000583818 LRRIQ4A6NIV6 560 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 MEIS3P2A8K0S8 358 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 INO80B-WBP1J3KQ70 363 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 ASAP2O43150 1006 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 ATF7P17544 494 aaPredicted RBP18.72■□□□□ 0.59
TSEN54-211ENST00000583818 CYP11B2P19099 503 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 PTENP60484 403 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 PKP1Q13835 747 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 MXD4Q14582 209 aaPredicted RBP18.72■□□□□ 0.59
TSEN54-211ENST00000583818 FOXD4L6Q3SYB3 417 aaPredicted RBP18.72■□□□□ 0.59
TSEN54-211ENST00000583818 SPECC1Q5M775 1068 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 ARL6IP4Q66PJ3 421 aaKnown RBP18.72■□□□□ 0.59
TSEN54-211ENST00000583818 FOXD4L3Q6VB84 417 aaPredicted RBP18.72■□□□□ 0.59
TSEN54-211ENST00000583818 CPB2Q96IY4 423 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 USP28Q96RU2 1077 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 RUSC1Q9BVN2 902 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 AGPAT5Q9NUQ2 364 aa18.72■□□□□ 0.59
TSEN54-211ENST00000583818 B4GALT5O43286 388 aa18.71■□□□□ 0.59
TSEN54-211ENST00000583818 EYA4O95677 639 aa18.71■□□□□ 0.59
TSEN54-211ENST00000583818 SSBP05455 408 aaKnown RBP eCLIP18.71■□□□□ 0.59
TSEN54-211ENST00000583818 MUTP22033 750 aa18.71■□□□□ 0.59
TSEN54-211ENST00000583818 HOXA11P31270 313 aaPredicted RBP18.71■□□□□ 0.59
TSEN54-211ENST00000583818 MBTD1Q05BQ5 628 aa18.71■□□□□ 0.59
TSEN54-211ENST00000583818 GPM6BQ13491 265 aa18.71■□□□□ 0.59
TSEN54-211ENST00000583818 TFDP1Q14186 410 aa18.71■□□□□ 0.59
TSEN54-211ENST00000583818 PTPAQ15257 358 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms