RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 BRINP1O60477 761 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 KPNA6O60684 536 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 FAHP16930 419 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 SART3Q15020 963 aaKnown RBP5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 LY6G5CQ5SRR4 150 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 PIK3R6Q5UE93 754 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 CYP4F22Q6NT55 531 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 USP30Q70CQ3 517 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 C16orf59Q7L2K0 433 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 ANKRD35Q8N283 1001 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 SCARB1Q8WTV0 552 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 LEO1Q8WVC0 666 aaPredicted RBP5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 CLEC4DQ8WXI8 215 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 TOR3AQ9H497 397 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 NUB1Q9Y5A7 615 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 SPATA31A6Q5VVP1 1343 aa5.15□□□□□ -1.59
SMCHD1-209ENST00000583441 CCDC66A2RUB6 948 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 FAM83GA6ND36 823 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 CBX4O00257 560 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 SLC27A2O14975 620 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 ZEB2O60315 1214 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 GAS7O60861 476 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 HOXB6P17509 224 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 CDK11BP21127 795 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 ETV4P43268 484 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 SCNN1BP51168 640 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 OCRLQ01968 901 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 SPIRE1Q08AE8 756 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 CRY1Q16526 586 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 ARHGAP44Q17R89 818 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 PAN2Q504Q3 1202 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 TMEM177Q53S58 311 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 HECTD2Q5U5R9 776 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 DPP8Q6V1X1 898 aaPredicted RBP5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 IGSF22Q8N9C0 903 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 CHST14Q8NCH0 376 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 ATL2Q8NHH9 583 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 SMG7Q92540 1137 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 USP7Q93009 1102 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 LENG9Q96B70 501 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 MPHOSPH9Q99550 1183 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 TTC1Q99614 292 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 IPPKQ9H8X2 491 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 METTL14Q9HCE5 456 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 RNF7Q9UBF6 113 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 APOBEC2Q9Y235 224 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 ZKSCAN5Q9Y2L8 839 aa5.14□□□□□ -1.59
SMCHD1-209ENST00000583441 ZNF839A8K0R7 811 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 GLRX3O76003 335 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 SRGAP2CP0DJJ0 459 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 GNAT1P11488 350 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 KCNA6P17658 529 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 SCNN1GP51170 649 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 TOB2Q14106 344 aaPredicted RBP5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 CD276Q5ZPR3 534 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 NECAB2Q7Z6G3 386 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 DDX42Q86XP3 938 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 UBR7Q8N806 425 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 PRPF38AQ8NAV1 312 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 PROKR1Q8TCW9 393 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 MTFR1LQ9H019 292 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 KIAA1683Q9H0B3 1180 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 IFT22Q9H7X7 185 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 HOMER2Q9NSB8 354 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 CATSPERZQ9NTU4 200 aa5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 DDX56Q9NY93 547 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-209ENST00000583441 M0R2C6 588 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 FAM20BO75063 409 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 F2P00734 622 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 HMGCRP04035 888 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 CLK3P49761 638 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 DNM2P50570 870 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 LACTBP83111 547 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 STRN3Q13033 797 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 PCBP1Q15365 356 aaKnown RBP eCLIP5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 SEPT7Q16181 437 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 RNF219Q5W0B1 726 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 ABHD17CQ6PCB6 329 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 SHCBP1Q8NEM2 672 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 MLST8Q9BVC4 326 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 CDIP1Q9H305 208 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 R3HDMLQ9H3Y0 253 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 RSAD1Q9HA92 442 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 B4GALT6Q9UBX8 382 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 TESQ9UGI8 421 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 COQ6Q9Y2Z9 468 aa5.12□□□□□ -1.59
SMCHD1-209ENST00000583441 GRID2IPA4D2P6 1211 aa5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 MYADML2A6NDP7 307 aa5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 B3GALT2O43825 422 aa5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 RAB11FIP3O75154 756 aa5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 EYA4O95677 639 aa5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 ABHD16AO95870 558 aa5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 PYGMP11217 842 aa5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 BPIP17213 487 aa5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 MAN2A2P49641 1150 aa5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 CDKN1CP49918 316 aaPredicted RBP5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 MECP2P51608 486 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 GPR19Q15760 415 aa5.11□□□□□ -1.59
SMCHD1-209ENST00000583441 SP5Q6BEB4 398 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms