RNA–Protein interactions for RNA: ENST00000580396.1

CPD-204, Transcript of carboxypeptidase D, humanhuman

TSL 5

Gene CPD, Length 2,733 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-204ENST00000580396 SLC35C1Q96A29 364 aa9.99□□□□□ -0.81
CPD-204ENST00000580396 FAM212AQ96EL1 285 aa9.99□□□□□ -0.81
CPD-204ENST00000580396 RBM17Q96I25 401 aaKnown RBP9.99□□□□□ -0.81
CPD-204ENST00000580396 AP1M1Q9BXS5 423 aa9.99□□□□□ -0.81
CPD-204ENST00000580396 DDX47Q9H0S4 455 aaKnown RBP9.99□□□□□ -0.81
CPD-204ENST00000580396 NEUROG2Q9H2A3 272 aa9.99□□□□□ -0.81
CPD-204ENST00000580396 DDX4Q9NQI0 724 aaKnown RBP9.99□□□□□ -0.81
CPD-204ENST00000580396 DIS3Q9Y2L1 958 aaKnown RBP9.99□□□□□ -0.81
CPD-204ENST00000580396 MRPL42Q9Y6G3 142 aaKnown RBP9.99□□□□□ -0.81
CPD-204ENST00000580396 ASTN1O14525 1302 aa9.99□□□□□ -0.81
CPD-204ENST00000580396 GMNCA6NCL1 334 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 E7EVH7 732 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 DDX3XO00571 662 aaKnown RBP eCLIP9.98□□□□□ -0.81
CPD-204ENST00000580396 SPATA31C1P0DKV0 1188 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 BDNFP23560 247 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 SEC24CP53992 1094 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 BIRC2Q13490 618 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 PPP2R5EQ16537 467 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 NFIL3Q16649 462 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 KCTD1Q719H9 257 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 TMC3Q7Z5M5 1100 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 SLC30A5Q8TAD4 765 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 DCAF4Q8WV16 495 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 CYFIP2Q96F07 1278 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 CABS1Q96KC9 395 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 CCDC17Q96LX7 622 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 GOLPH3Q9H4A6 298 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 VCPKMTQ9H867 229 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 POLLQ9UGP5 575 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 TMCO5BA8MYB1 307 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 TRAPPC3O43617 180 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 PPP2R2AP63151 447 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 ARHGAP4P98171 946 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 ACTN3Q08043 901 aaPredicted RBP9.98□□□□□ -0.81
CPD-204ENST00000580396 DDR1Q08345 913 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 DCAF17Q5H9S7 520 aaPredicted RBP9.98□□□□□ -0.81
CPD-204ENST00000580396 ARMC9Q7Z3E5 817 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 DDX42Q86XP3 938 aaKnown RBP eCLIP9.98□□□□□ -0.81
CPD-204ENST00000580396 NLRP7Q8WX94 980 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 BORCS6Q96GS4 357 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 FAM20AQ96MK3 541 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 BEGAINQ9BUH8 593 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 GCNT4Q9P109 453 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 PCDHA1Q9Y5I3 950 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 SIPA1L1O43166 1804 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 C5orf60A6NFR6 353 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 H0YHG0 523 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 MEIS2O14770 477 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 HPDP32754 393 aaPredicted RBP9.98□□□□□ -0.81
CPD-204ENST00000580396 STAT1P42224 750 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 PSMC6P62333 389 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 POU5F1Q01860 360 aaKnown RBP9.98□□□□□ -0.81
CPD-204ENST00000580396 PABPC4Q13310 644 aaKnown RBP eCLIP9.98□□□□□ -0.81
CPD-204ENST00000580396 DAAM2Q86T65 1068 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 FMNL3Q8IVF7 1028 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 RPUSD2Q8IZ73 545 aaKnown RBP9.98□□□□□ -0.81
CPD-204ENST00000580396 OLIG1Q8TAK6 271 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 POLD4Q9HCU8 107 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 OLFML3Q9NRN5 406 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 AMACRQ9UHK6 382 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 AJAP1Q9UKB5 411 aaPredicted RBP9.98□□□□□ -0.81
CPD-204ENST00000580396 DAAM1Q9Y4D1 1078 aa9.98□□□□□ -0.81
CPD-204ENST00000580396 EIF3DO15371 548 aaKnown RBP eCLIP9.97□□□□□ -0.81
CPD-204ENST00000580396 DAPK3O43293 454 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 HLA-DOAP06340 250 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 TMEM253P0C7T8 217 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 ITGA4P13612 1032 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 GAP43P17677 238 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 LMNB1P20700 586 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 HOXA10P31260 410 aaPredicted RBP9.97□□□□□ -0.81
CPD-204ENST00000580396 EIF3BP55884 814 aaKnown RBP9.97□□□□□ -0.81
CPD-204ENST00000580396 CLUL1Q15846 466 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 OR2W6PQ8NHA6 318 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 UBLCP1Q8WVY7 318 aaPredicted RBP9.97□□□□□ -0.81
CPD-204ENST00000580396 RFFLQ8WZ73 363 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 MKL1Q969V6 931 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 LENG9Q96B70 501 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 ABHD8Q96I13 439 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 POLR3CQ9BUI4 534 aaPredicted RBP9.97□□□□□ -0.81
CPD-204ENST00000580396 TXLNGYQ9BZA5 131 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 IRF2BPLQ9H1B7 796 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 ACTR5Q9H9F9 607 aaPredicted RBP9.97□□□□□ -0.81
CPD-204ENST00000580396 A1CFQ9NQ94 594 aaKnown RBP9.97□□□□□ -0.81
CPD-204ENST00000580396 AMFRQ9UKV5 643 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 UTP11Q9Y3A2 253 aaKnown RBP9.97□□□□□ -0.81
CPD-204ENST00000580396 F8VZ95 297 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 TTI1O43156 1089 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 PPFIA2O75334 1257 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 FOSP01100 380 aaPredicted RBP9.97□□□□□ -0.81
CPD-204ENST00000580396 CIITAP33076 1130 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 SREBF1P36956 1147 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 SMTNP53814 917 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 GALCP54803 685 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 GTF2IP78347 998 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 C4orf46Q504U0 113 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 PRR16Q569H4 304 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 TCERG1LQ5VWI1 586 aa9.97□□□□□ -0.81
CPD-204ENST00000580396 LNX1Q8TBB1 728 aaPredicted RBP9.97□□□□□ -0.81
CPD-204ENST00000580396 U2AF1L4Q8WU68 220 aaKnown RBP9.97□□□□□ -0.81
CPD-204ENST00000580396 UCN2Q96RP3 112 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms