RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 ATRIPQ8WXE1 791 aa10.98□□□□□ -0.65
MSI2-209ENST00000579483 HVCN1Q96D96 273 aa10.98□□□□□ -0.65
MSI2-209ENST00000579483 ZFP91Q96JP5 570 aaPredicted RBP10.98□□□□□ -0.65
MSI2-209ENST00000579483 TTC25Q96NG3 672 aa10.98□□□□□ -0.65
MSI2-209ENST00000579483 DYRK4Q9NR20 520 aa10.98□□□□□ -0.65
MSI2-209ENST00000579483 MAN1B1Q9UKM7 699 aa10.98□□□□□ -0.65
MSI2-209ENST00000579483 PPLO60437 1756 aa10.98□□□□□ -0.65
MSI2-209ENST00000579483 ATF2P15336 505 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 CCDC15Q0P6D6 951 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 RGMBQ6NW40 437 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 HDXQ7Z353 690 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 RHOT2Q8IXI1 618 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 CFAP57Q96MR6 1250 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 AIFM3Q96NN9 605 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 C17orf75Q9HAS0 396 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 AKR1A1P14550 325 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 HERVK_113P62684 666 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 RPS6P62753 249 aaKnown RBP10.97□□□□□ -0.65
MSI2-209ENST00000579483 ZBED6P86452 979 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 DDR1Q08345 913 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 TOB2Q14106 344 aaPredicted RBP10.97□□□□□ -0.65
MSI2-209ENST00000579483 TFDP2Q14188 446 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 DCAF4L1Q3SXM0 396 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 RESP18Q5W5W9 173 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 ARHGEF18Q6ZSZ5 1173 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 NKX2-3Q8TAU0 364 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 PPP4R1Q8TF05 950 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 EPSTI1Q96J88 318 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 TRIM31Q9BZY9 425 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.97□□□□□ -0.65
MSI2-209ENST00000579483 V9GYY5 206 aaPredicted RBP10.97□□□□□ -0.65
MSI2-209ENST00000579483 SFI1A8K8P3 1242 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 NEMP1O14524 444 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 UPP2O95045 317 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 SERPING1P05155 500 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 WHAMMP3Q1A5X7 153 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 SRBD1Q8N5C6 995 aaKnown RBP10.97□□□□□ -0.65
MSI2-209ENST00000579483 DDX23Q9BUQ8 820 aaKnown RBP10.97□□□□□ -0.65
MSI2-209ENST00000579483 WNT10BO00744 389 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 FKTNO75072 461 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 TDP2O95551 362 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 KRT1P04264 644 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 PNPLA4P41247 253 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 VAMP7P51809 220 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 IRX5P78411 483 aaPredicted RBP10.97□□□□□ -0.65
MSI2-209ENST00000579483 COASYQ13057 564 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 CPLX4Q7Z7G2 160 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 CCDC170Q8IYT3 715 aa10.97□□□□□ -0.65
MSI2-209ENST00000579483 H7C4K7 107 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 DYNC1I1O14576 645 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 PRRG1O14668 218 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 HIP1RO75146 1068 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 TGFB3P10600 412 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 RAG1P15918 1043 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 DRP2Q13474 957 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 EMC2Q15006 297 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 RPUSD2Q8IZ73 545 aaKnown RBP10.96□□□□□ -0.65
MSI2-209ENST00000579483 IDI2Q9BXS1 227 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 SPATC1LQ9H0A9 340 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 UBN1Q9NPG3 1134 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 POTEFA5A3E0 1075 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 VIL1P09327 827 aaKnown RBP10.96□□□□□ -0.65
MSI2-209ENST00000579483 POTEIP0CG38 1075 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 ASPHQ12797 758 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 MAPRE1Q15691 268 aaKnown RBP10.96□□□□□ -0.65
MSI2-209ENST00000579483 CCDC6Q16204 474 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 KIAA1755Q5JYT7 1200 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 POTEGQ6S5H5 508 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 C15orf52Q6ZUT6 534 aaKnown RBP10.96□□□□□ -0.65
MSI2-209ENST00000579483 RAB44Q7Z6P3 723 aaPredicted RBP10.96□□□□□ -0.65
MSI2-209ENST00000579483 GDAP1Q8TB36 358 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 TRIM56Q9BRZ2 755 aaKnown RBP10.96□□□□□ -0.65
MSI2-209ENST00000579483 VTA1Q9NP79 307 aa10.96□□□□□ -0.65
MSI2-209ENST00000579483 MUTP22033 750 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 ST8SIA6P61647 398 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 PRKCEQ02156 737 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 PPP2R5CQ13362 524 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 KRT33BQ14525 404 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 SV2CQ496J9 727 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 GUF1Q8N442 669 aaKnown RBP10.96□□□□□ -0.66
MSI2-209ENST00000579483 JMJD4Q9H9V9 463 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 FAM217BQ9NTX9 383 aaPredicted RBP10.96□□□□□ -0.66
MSI2-209ENST00000579483 PCDHB8Q9UN66 801 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 JRKLQ9Y4A0 524 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 TRPA1O75762 1119 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 GFPT2O94808 682 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 SDC4P31431 198 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 ADKP55263 362 aaKnown RBP10.96□□□□□ -0.66
MSI2-209ENST00000579483 DACT2Q5SW24 774 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 DENND2CQ68D51 928 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 CD302Q8IX05 232 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 DNAAF3Q8N9W5 541 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 UBE2Q2Q8WVN8 375 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 MTG1Q9BT17 334 aaPredicted RBP10.96□□□□□ -0.66
MSI2-209ENST00000579483 CALN1Q9BXU9 219 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 ABHD16BQ9H3Z7 469 aa10.96□□□□□ -0.66
MSI2-209ENST00000579483 VCAM1P19320 739 aa10.95□□□□□ -0.66
MSI2-209ENST00000579483 THPOP40225 353 aa10.95□□□□□ -0.66
MSI2-209ENST00000579483 ATP2C1P98194 919 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms