RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ELAC1Q9H777 363 aaKnown RBP26.12■■□□□ 1.77
SNF8-217ENST00000576353 RC3H2Q9HBD1 1191 aaKnown RBP26.12■■□□□ 1.77
SNF8-217ENST00000576353 TMEM161AQ9NX61 479 aa26.12■■□□□ 1.77
SNF8-217ENST00000576353 TTC3P53804 2025 aa26.12■■□□□ 1.77
SNF8-217ENST00000576353 VWA3AA6NCI4 1184 aa26.11■■□□□ 1.77
SNF8-217ENST00000576353 RFXAPO00287 272 aa26.11■■□□□ 1.77
SNF8-217ENST00000576353 IBSPP21815 317 aaPredicted RBP26.11■■□□□ 1.77
SNF8-217ENST00000576353 ARL2P36404 184 aa26.11■■□□□ 1.77
SNF8-217ENST00000576353 PHKA2P46019 1235 aa26.11■■□□□ 1.77
SNF8-217ENST00000576353 POU5F1BQ06416 359 aa26.11■■□□□ 1.77
SNF8-217ENST00000576353 RESTQ13127 1097 aa26.11■■□□□ 1.77
SNF8-217ENST00000576353 ECM1Q16610 540 aa26.11■■□□□ 1.77
SNF8-217ENST00000576353 PADI6Q6TGC4 694 aa26.11■■□□□ 1.77
SNF8-217ENST00000576353 CMTR2Q8IYT2 770 aaKnown RBP26.11■■□□□ 1.77
SNF8-217ENST00000576353 C17orf80Q9BSJ5 609 aa26.11■■□□□ 1.77
SNF8-217ENST00000576353 DDX19AQ9NUU7 478 aaKnown RBP26.11■■□□□ 1.77
SNF8-217ENST00000576353 DNM3Q9UQ16 869 aa26.11■■□□□ 1.77
SNF8-217ENST00000576353 MTMR6Q9Y217 621 aa26.11■■□□□ 1.77
SNF8-217ENST00000576353 EPOPA6NHQ4 379 aa26.1■■□□□ 1.77
SNF8-217ENST00000576353 PP2D1A8MPX8 630 aa26.1■■□□□ 1.77
SNF8-217ENST00000576353 GTPBP6O43824 516 aaPredicted RBP26.1■■□□□ 1.77
SNF8-217ENST00000576353 PDIA4P13667 645 aaKnown RBP26.1■■□□□ 1.77
SNF8-217ENST00000576353 SF3A1Q15459 793 aaKnown RBP26.1■■□□□ 1.77
SNF8-217ENST00000576353 POLR3FQ9H1D9 316 aaPredicted RBP26.1■■□□□ 1.77
SNF8-217ENST00000576353 ZSCAN16Q9H4T2 348 aaPredicted RBP26.1■■□□□ 1.77
SNF8-217ENST00000576353 RWDD3Q9Y3V2 267 aa26.1■■□□□ 1.77
SNF8-217ENST00000576353 LOXHD1Q8IVV2 1947 aa26.1■■□□□ 1.77
SNF8-217ENST00000576353 COL4A6Q14031 1691 aa26.09■■□□□ 1.77
SNF8-217ENST00000576353 CYP11B2P19099 503 aa26.09■■□□□ 1.77
SNF8-217ENST00000576353 POU3F3P20264 500 aaPredicted RBP26.09■■□□□ 1.77
SNF8-217ENST00000576353 CDC25AP30304 524 aa26.09■■□□□ 1.77
SNF8-217ENST00000576353 PCBP1Q15365 356 aaKnown RBP eCLIP26.09■■□□□ 1.77
SNF8-217ENST00000576353 EPC2Q52LR7 807 aa26.09■■□□□ 1.77
SNF8-217ENST00000576353 TMEM192Q8IY95 271 aa26.09■■□□□ 1.77
SNF8-217ENST00000576353 KCTD17Q8N5Z5 321 aa26.09■■□□□ 1.77
SNF8-217ENST00000576353 FBXO22Q8NEZ5 403 aa26.09■■□□□ 1.77
SNF8-217ENST00000576353 AK8Q96MA6 479 aa26.09■■□□□ 1.77
SNF8-217ENST00000576353 BHMT2Q9H2M3 363 aa26.09■■□□□ 1.77
SNF8-217ENST00000576353 PIN4Q9Y237 131 aaKnown RBP26.09■■□□□ 1.77
SNF8-217ENST00000576353 A0A0U1RQF3 1178 aa26.08■■□□□ 1.77
SNF8-217ENST00000576353 HOXA2O43364 376 aa26.08■■□□□ 1.77
SNF8-217ENST00000576353 PTENP60484 403 aa26.08■■□□□ 1.77
SNF8-217ENST00000576353 GRB10Q13322 594 aa26.08■■□□□ 1.77
SNF8-217ENST00000576353 FAM102BQ5T8I3 360 aa26.08■■□□□ 1.77
SNF8-217ENST00000576353 MAEAQ7L5Y9 396 aa26.08■■□□□ 1.77
SNF8-217ENST00000576353 ECHDC2Q86YB7 292 aa26.08■■□□□ 1.77
SNF8-217ENST00000576353 ASAP3Q8TDY4 903 aa26.08■■□□□ 1.77
SNF8-217ENST00000576353 MMTAG2Q9BU76 263 aaKnown RBP26.08■■□□□ 1.77
SNF8-217ENST00000576353 TRAIPQ9BWF2 469 aa26.08■■□□□ 1.77
SNF8-217ENST00000576353 EYA4O95677 639 aa26.07■■□□□ 1.76
SNF8-217ENST00000576353 EOMESO95936 686 aa26.07■■□□□ 1.76
SNF8-217ENST00000576353 SKIP12755 728 aa26.07■■□□□ 1.76
SNF8-217ENST00000576353 GLRA2P23416 452 aa26.07■■□□□ 1.76
SNF8-217ENST00000576353 CAPSQ13938 189 aa26.07■■□□□ 1.76
SNF8-217ENST00000576353 TWF2Q6IBS0 349 aaKnown RBP26.07■■□□□ 1.76
SNF8-217ENST00000576353 IFNLR1Q8IU57 520 aaPredicted RBP26.07■■□□□ 1.76
SNF8-217ENST00000576353 CLP1Q92989 425 aaKnown RBP26.07■■□□□ 1.76
SNF8-217ENST00000576353 NFKBIZQ9BYH8 718 aa26.07■■□□□ 1.76
SNF8-217ENST00000576353 NT5C3AQ9H0P0 336 aa26.07■■□□□ 1.76
SNF8-217ENST00000576353 MINDY3Q9H8M7 445 aa26.07■■□□□ 1.76
SNF8-217ENST00000576353 LMCD1Q9NZU5 365 aa26.07■■□□□ 1.76
SNF8-217ENST00000576353 CDH23Q9H251 3354 aa26.07■■□□□ 1.76
SNF8-217ENST00000576353 MYO9BQ13459 2157 aa26.06■■□□□ 1.76
SNF8-217ENST00000576353 SLC26A4O43511 780 aa26.06■■□□□ 1.76
SNF8-217ENST00000576353 ERLIN2O94905 339 aa26.06■■□□□ 1.76
SNF8-217ENST00000576353 RB1P06400 928 aa26.06■■□□□ 1.76
SNF8-217ENST00000576353 BMPR1AP36894 532 aa26.06■■□□□ 1.76
SNF8-217ENST00000576353 NCBP1Q09161 790 aaKnown RBP26.06■■□□□ 1.76
SNF8-217ENST00000576353 ZRSR1Q15695 479 aaKnown RBP26.06■■□□□ 1.76
SNF8-217ENST00000576353 HYIQ5T013 277 aa26.06■■□□□ 1.76
SNF8-217ENST00000576353 CDK5RAP3Q96JB5 506 aa26.06■■□□□ 1.76
SNF8-217ENST00000576353 GPRC5CQ9NQ84 441 aa26.06■■□□□ 1.76
SNF8-217ENST00000576353 AGPAT5Q9NUQ2 364 aa26.06■■□□□ 1.76
SNF8-217ENST00000576353 MTCH2Q9Y6C9 303 aa26.06■■□□□ 1.76
SNF8-217ENST00000576353 INO80B-WBP1J3KQ70 363 aa26.05■■□□□ 1.76
SNF8-217ENST00000576353 LPXNO60711 386 aa26.05■■□□□ 1.76
SNF8-217ENST00000576353 LONP1P36776 959 aaKnown RBP26.05■■□□□ 1.76
SNF8-217ENST00000576353 RAB27AP51159 221 aa26.05■■□□□ 1.76
SNF8-217ENST00000576353 PAN2Q504Q3 1202 aaKnown RBP26.05■■□□□ 1.76
SNF8-217ENST00000576353 GDPD5Q8WTR4 605 aa26.05■■□□□ 1.76
SNF8-217ENST00000576353 CLIC4Q9Y696 253 aa26.05■■□□□ 1.76
SNF8-217ENST00000576353 MRPL42Q9Y6G3 142 aaKnown RBP26.05■■□□□ 1.76
SNF8-217ENST00000576353 CHD7Q9P2D1 2997 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 TBKBP1A7MCY6 615 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 E9PMD0 336 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 C5orf67F2Z3F1 127 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 H3BNC9 293 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 FGFR1P11362 822 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 CTNNB1P35222 781 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 UBA7P41226 1012 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 GATMP50440 423 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 ABI1Q8IZP0 508 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 RNF169Q8NCN4 708 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 TMEM117Q9H0C3 514 aa26.04■■□□□ 1.76
SNF8-217ENST00000576353 ARID2Q68CP9 1835 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 LRRIQ4A6NIV6 560 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 LINC00271P0C7V0 271 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 AXLP30530 894 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 GPM6BQ13491 265 aa26.03■■□□□ 1.76
SNF8-217ENST00000576353 PPP2R5AQ15172 486 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms