RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ZBTB39O15060 712 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 TRIM49P0CI25 452 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 TRIM49CP0CI26 452 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 CDR1P51861 262 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 SLC15A2Q16348 729 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 ARHGAP44Q17R89 818 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 SPDYCQ5MJ68 293 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 GKAP1Q5VSY0 366 aaPredicted RBP16.94■□□□□ 0.3
NUP88-207ENST00000573584 C1orf186Q6ZWK4 172 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 HS2ST1Q7LGA3 356 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 ARMC9Q7Z3E5 817 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 MDM1Q8TC05 714 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 INTS2Q9H0H0 1204 aaKnown RBP16.94■□□□□ 0.3
NUP88-207ENST00000573584 CNOT10Q9H9A5 744 aaKnown RBP16.94■□□□□ 0.3
NUP88-207ENST00000573584 APEX2Q9UBZ4 518 aa16.94■□□□□ 0.3
NUP88-207ENST00000573584 CAND2O75155 1236 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 RASSF9O75901 435 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 SLITRK3O94933 977 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 NFIL3Q16649 462 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 TATDN2Q93075 761 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 TLCD1Q96CP7 247 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 ZDHHC18Q9NUE0 388 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 ANKRD62A6NC57 917 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 DDTLA6NHG4 134 aaPredicted RBP16.93■□□□□ 0.3
NUP88-207ENST00000573584 CHMP2AO43633 222 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 MMP14P50281 582 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 PLTPP55058 493 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 IRX3P78415 501 aaPredicted RBP16.93■□□□□ 0.3
NUP88-207ENST00000573584 SYDE2Q5VT97 1194 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 HOOK3Q86VS8 718 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 PALB2Q86YC2 1186 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 ALG3Q92685 438 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 PI4KBQ9UBF8 816 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 COG5Q9UP83 839 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 DNM1LO00429 736 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 SHBGP04278 402 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 ZNF720Q7Z2F6 126 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 FMNL3Q8IVF7 1028 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 KCTD17Q8N5Z5 321 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 DYDC2Q96IM9 177 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 SLC40A1Q9NP59 571 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 TMOD4Q9NZQ9 345 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 PNMA2Q9UL42 364 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 SNX24Q9Y343 169 aa16.93■□□□□ 0.3
NUP88-207ENST00000573584 FAM187AA6NFU0 413 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 G3V3G9 751 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 OPLAHO14841 1288 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 NDUFB10O96000 172 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 CRKP46108 304 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 PMS2P54278 862 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 KIAA1755Q5JYT7 1200 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 OTOP1Q7RTM1 612 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 FAM178BQ8IXR5 827 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 NCAPGQ9BPX3 1015 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 PABPC3Q9H361 631 aaKnown RBP16.92■□□□□ 0.3
NUP88-207ENST00000573584 TUFT1Q9NNX1 390 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 AGPAT3Q9NRZ7 376 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 ALG6Q9Y672 507 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 FRMPD4Q14CM0 1322 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 LRRN2O75325 713 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 CYP3A4P08684 503 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 KRT13P13646 458 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 MYL7Q01449 175 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 BYSLQ13895 437 aaKnown RBP16.92■□□□□ 0.3
NUP88-207ENST00000573584 DHX34Q14147 1143 aaKnown RBP16.92■□□□□ 0.3
NUP88-207ENST00000573584 SPRED3Q2MJR0 410 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 ANKRD20A8PQ5CZ79 823 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 JAMLQ86YT9 394 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 NEK9Q8TD19 979 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 JPH2Q9BR39 696 aaPredicted RBP16.92■□□□□ 0.3
NUP88-207ENST00000573584 EPB41L4BQ9H329 900 aa16.92■□□□□ 0.3
NUP88-207ENST00000573584 GREB1LQ9C091 1923 aaPredicted RBP16.92■□□□□ 0.3
NUP88-207ENST00000573584 IGLV3-22A0A075B6J6 115 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 FOXN3O00409 490 aaPredicted RBP16.91■□□□□ 0.3
NUP88-207ENST00000573584 GDF11O95390 407 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 MAPK7Q13164 816 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 CLUL1Q15846 466 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 RDH13Q8NBN7 331 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 CHMP6Q96FZ7 201 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 XPO6Q96QU8 1125 aaKnown RBP16.91■□□□□ 0.3
NUP88-207ENST00000573584 DMAC2Q9NW81 257 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 TLDC2A0PJX2 215 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 KIAA0391O15091 583 aaKnown RBP16.91■□□□□ 0.3
NUP88-207ENST00000573584 CTNND1O60716 968 aaKnown RBP16.91■□□□□ 0.3
NUP88-207ENST00000573584 NUDT17P0C025 328 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 DRD4P21917 467 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 PPP2R5AQ15172 486 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 ERMARDQ5T6L9 678 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 LRCH2Q5VUJ6 765 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 DENND2CQ68D51 928 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 PHLDB3Q6NSJ2 640 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 AADACL2Q6P093 401 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 TMEM179Q6ZVK1 233 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 STXBP4Q6ZWJ1 553 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 FBXO25Q8TCJ0 367 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 GMCL1Q96IK5 515 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 FIZ1Q96SL8 496 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 CD248Q9HCU0 757 aa16.91■□□□□ 0.3
NUP88-207ENST00000573584 RASAL2Q9UJF2 1139 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms