RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 ARL13BQ3SXY8 428 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 WDR45BQ5MNZ6 344 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 C6orf183Q5T699 404 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 NLRP10Q86W26 655 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 SPATA24Q86W54 205 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 CCNJLQ8IV13 435 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 FOXP4Q8IVH2 680 aaPredicted RBP11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 STK32AQ8WU08 396 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 RAB3IPQ96QF0 476 aaPredicted RBP11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 RAB17Q9H0T7 212 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 NAPBQ9H115 298 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 GREM2Q9H772 168 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 PCSK1NQ9UHG2 260 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 MROH7Q68CQ1 1323 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 MROH5Q6ZUA9 1318 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 WNK3Q9BYP7 1800 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 ORC4O43929 436 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 DGKIO75912 1065 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 DEXIO95424 95 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 BMP6P22004 513 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 SERPINB3P29508 390 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 MXI1P50539 228 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 DCTN2Q13561 401 aaKnown RBP11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 PUM3Q15397 648 aaKnown RBP11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 CRY1Q16526 586 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 IL23RQ5VWK5 629 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 TRPM8Q7Z2W7 1104 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 FNDC8Q8TC99 324 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 UCMAQ8WVF2 138 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 STARD8Q92502 1023 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 NSMCE3Q96MG7 304 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 MMS19Q96T76 1030 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 TCF12Q99081 682 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 ARHGEF3Q9NR81 526 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 PTTG2Q9NZH5 202 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 NOX1Q9Y5S8 564 aa11.3□□□□□ -0.6
CHRNB1-205ENST00000573209 PABPN1LA6NDY0 278 aaKnown RBP11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 ASAP2O43150 1006 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 LDHCP07864 332 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 RXRBP28702 533 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 GPC3P51654 580 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 WASHC5Q12768 1159 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 MTMR3Q13615 1198 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 RTN1Q16799 776 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 VPS36Q86VN1 386 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 DIS3L2Q8IYB7 885 aaKnown RBP11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 IFNL3Q8IZI9 196 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 IQCKQ8N0W5 287 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 MREGQ8N565 214 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 ENDOVQ8N8Q3 282 aaKnown RBP11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 NKX2-3Q8TAU0 364 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 SH3TC2Q8TF17 1288 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 NAT14Q8WUY8 206 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 LPIN2Q92539 896 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 KLHL29Q96CT2 875 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 ANKRD36BP1Q96IX9 119 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 EPB41L4AQ9HCS5 686 aaPredicted RBP11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 STK39Q9UEW8 545 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 WWC3Q9ULE0 1092 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 PPP1R9AQ9ULJ8 1098 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 PLAAQ9Y263 795 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 NFE2L3Q9Y4A8 694 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 RREB1Q92766 1687 aa11.29□□□□□ -0.6
CHRNB1-205ENST00000573209 ZNF233A6NK53 670 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 PDE8AO60658 829 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 KRT16P08779 473 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 VAV1P15498 845 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 ETV3P41162 512 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 PHKA1P46020 1223 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 PTDSS1P48651 473 aaKnown RBP11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 TOB1P50616 345 aaPredicted RBP11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 PLCD1P51178 756 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 RCN2Q14257 317 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 R3HDM1Q15032 1099 aaKnown RBP11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 ANKDD1AQ495B1 522 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 EAPPQ56P03 285 aaPredicted RBP11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 TWF2Q6IBS0 349 aaKnown RBP11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 SIX5Q8N196 739 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 MMGT1Q8N4V1 131 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 PPFIBP2Q8ND30 876 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 SPATA20Q8TB22 786 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 ECT2Q9H8V3 914 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 CYP39A1Q9NYL5 469 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 ZSWIM5Q9P217 1185 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 SRPRBQ9Y5M8 271 aaKnown RBP11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 SAR1BQ9Y6B6 198 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 LAMB1P07942 1786 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 PNPLA7Q6ZV29 1317 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 CASZ1Q86V15 1759 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 LOC105371267A0A1B0GV96 52 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 FBP2O00757 339 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 NVLO15381 856 aaKnown RBP11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 RARAP10276 462 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 PTPN2P17706 415 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 FGFR2P21802 821 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 PPP2R5BQ15173 497 aa11.28□□□□□ -0.6
CHRNB1-205ENST00000573209 TMTC4Q5T4D3 741 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms