RNA–Protein interactions for RNA: ENST00000570798.5

LITAF-204, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-204ENST00000570798 CHST12Q9NRB3 414 aa20.09■□□□□ 0.81
LITAF-204ENST00000570798 TMEM161AQ9NX61 479 aa20.09■□□□□ 0.81
LITAF-204ENST00000570798 LRFN2Q9ULH4 789 aa20.09■□□□□ 0.81
LITAF-204ENST00000570798 PCDHB7Q9Y5E2 793 aa20.09■□□□□ 0.81
LITAF-204ENST00000570798 STK24Q9Y6E0 443 aa20.09■□□□□ 0.81
LITAF-204ENST00000570798 PRRC2BQ5JSZ5 2229 aaKnown RBP20.08■□□□□ 0.81
LITAF-204ENST00000570798 ATG2AQ2TAZ0 1938 aa20.08■□□□□ 0.81
LITAF-204ENST00000570798 SYT1P21579 422 aa20.08■□□□□ 0.81
LITAF-204ENST00000570798 SFPQP23246 707 aaKnown RBP eCLIP20.08■□□□□ 0.81
LITAF-204ENST00000570798 CCT6AP40227 531 aaKnown RBP20.08■□□□□ 0.81
LITAF-204ENST00000570798 POU5F1BQ06416 359 aa20.08■□□□□ 0.81
LITAF-204ENST00000570798 BTG3Q14201 252 aaPredicted RBP20.08■□□□□ 0.81
LITAF-204ENST00000570798 MXD4Q14582 209 aaPredicted RBP20.08■□□□□ 0.81
LITAF-204ENST00000570798 SRGAP1Q7Z6B7 1085 aa20.08■□□□□ 0.81
LITAF-204ENST00000570798 FBXO22Q8NEZ5 403 aa20.08■□□□□ 0.81
LITAF-204ENST00000570798 GDPD5Q8WTR4 605 aa20.08■□□□□ 0.81
LITAF-204ENST00000570798 CCDC43Q96MW1 224 aaKnown RBP20.08■□□□□ 0.81
LITAF-204ENST00000570798 TRAIPQ9BWF2 469 aa20.08■□□□□ 0.81
LITAF-204ENST00000570798 LMCD1Q9NZU5 365 aa20.08■□□□□ 0.81
LITAF-204ENST00000570798 C5orf67F2Z3F1 127 aa20.07■□□□□ 0.8
LITAF-204ENST00000570798 SRGAP2CP0DJJ0 459 aa20.07■□□□□ 0.8
LITAF-204ENST00000570798 GATMP50440 423 aa20.07■□□□□ 0.8
LITAF-204ENST00000570798 ARL6IP4Q66PJ3 421 aaKnown RBP20.07■□□□□ 0.8
LITAF-204ENST00000570798 IFNLR1Q8IU57 520 aaPredicted RBP20.07■□□□□ 0.8
LITAF-204ENST00000570798 RNF149Q8NC42 400 aa20.07■□□□□ 0.8
LITAF-204ENST00000570798 MMTAG2Q9BU76 263 aaKnown RBP20.07■□□□□ 0.8
LITAF-204ENST00000570798 MINDY3Q9H8M7 445 aa20.07■□□□□ 0.8
LITAF-204ENST00000570798 TRANK1O15050 2925 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 A0A0U1RQF3 1178 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 VPS37CA5D8V6 355 aaPredicted RBP20.06■□□□□ 0.8
LITAF-204ENST00000570798 PP2D1A8MPX8 630 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 H3BNC9 293 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 GTPBP6O43824 516 aaPredicted RBP20.06■□□□□ 0.8
LITAF-204ENST00000570798 USO1O60763 962 aaKnown RBP20.06■□□□□ 0.8
LITAF-204ENST00000570798 RB1P06400 928 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 BMPR1AP36894 532 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 PTENP60484 403 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 FAM102BQ5T8I3 360 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 ZNF598Q86UK7 904 aaKnown RBP20.06■□□□□ 0.8
LITAF-204ENST00000570798 ECHDC2Q86YB7 292 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 ASAP3Q8TDY4 903 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 SNX29Q8TEQ0 813 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 RNF19AQ9NV58 838 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 DACT1Q9NYF0 836 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 KIAA1024Q9UPX6 916 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 RWDD3Q9Y3V2 267 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 MRPL42Q9Y6G3 142 aaKnown RBP20.06■□□□□ 0.8
LITAF-204ENST00000570798 MYH15Q9Y2K3 1946 aa20.06■□□□□ 0.8
LITAF-204ENST00000570798 GLRA2P23416 452 aa20.05■□□□□ 0.8
LITAF-204ENST00000570798 CDC25AP30304 524 aa20.05■□□□□ 0.8
LITAF-204ENST00000570798 CAPSQ13938 189 aa20.05■□□□□ 0.8
LITAF-204ENST00000570798 CCDC85BQ15834 202 aaPredicted RBP20.05■□□□□ 0.8
LITAF-204ENST00000570798 PAN2Q504Q3 1202 aaKnown RBP20.05■□□□□ 0.8
LITAF-204ENST00000570798 KRT79Q5XKE5 535 aa20.05■□□□□ 0.8
LITAF-204ENST00000570798 PADI6Q6TGC4 694 aa20.05■□□□□ 0.8
LITAF-204ENST00000570798 CATSPER4Q7RTX7 472 aa20.05■□□□□ 0.8
LITAF-204ENST00000570798 SLC17A8Q8NDX2 589 aa20.05■□□□□ 0.8
LITAF-204ENST00000570798 MCPH1Q8NEM0 835 aa20.05■□□□□ 0.8
LITAF-204ENST00000570798 FOXD4L1Q9NU39 408 aa20.05■□□□□ 0.8
LITAF-204ENST00000570798 AGPAT5Q9NUQ2 364 aa20.05■□□□□ 0.8
LITAF-204ENST00000570798 DDX19AQ9NUU7 478 aaKnown RBP20.05■□□□□ 0.8
LITAF-204ENST00000570798 EOMESO95936 686 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 FGFR1P11362 822 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 ATF7P17544 494 aaPredicted RBP20.04■□□□□ 0.8
LITAF-204ENST00000570798 CYP11B2P19099 503 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 IBSPP21815 317 aaPredicted RBP20.04■□□□□ 0.8
LITAF-204ENST00000570798 CTNNB1P35222 781 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 PHKA2P46019 1235 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 RESTQ13127 1097 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 GPM6BQ13491 265 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 TFDP1Q14186 410 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 HYIQ5T013 277 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 PPM1EQ8WY54 764 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 NFKBIZQ9BYH8 718 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 POLR3FQ9H1D9 316 aaPredicted RBP20.04■□□□□ 0.8
LITAF-204ENST00000570798 GPRC5CQ9NQ84 441 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 MTMR6Q9Y217 621 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 PIN4Q9Y237 131 aaKnown RBP20.04■□□□□ 0.8
LITAF-204ENST00000570798 PLXNA4Q9HCM2 1894 aa20.04■□□□□ 0.8
LITAF-204ENST00000570798 ARHGEF35A5YM69 484 aa20.03■□□□□ 0.8
LITAF-204ENST00000570798 VWA3AA6NCI4 1184 aa20.03■□□□□ 0.8
LITAF-204ENST00000570798 BMP15O95972 392 aa20.03■□□□□ 0.8
LITAF-204ENST00000570798 HOXA11P31270 313 aaPredicted RBP20.03■□□□□ 0.8
LITAF-204ENST00000570798 PCBP1Q15365 356 aaKnown RBP eCLIP20.03■□□□□ 0.8
LITAF-204ENST00000570798 MAEAQ7L5Y9 396 aa20.03■□□□□ 0.8
LITAF-204ENST00000570798 CASD1Q96PB1 797 aa20.03■□□□□ 0.8
LITAF-204ENST00000570798 PLVAPQ9BX97 442 aa20.03■□□□□ 0.8
LITAF-204ENST00000570798 TMEM117Q9H0C3 514 aa20.03■□□□□ 0.8
LITAF-204ENST00000570798 BHMT2Q9H2M3 363 aa20.03■□□□□ 0.8
LITAF-204ENST00000570798 TBKBP1A7MCY6 615 aa20.02■□□□□ 0.8
LITAF-204ENST00000570798 E9PMD0 336 aa20.02■□□□□ 0.8
LITAF-204ENST00000570798 HOXA2O43364 376 aa20.02■□□□□ 0.8
LITAF-204ENST00000570798 ZNF623O75123 536 aa20.02■□□□□ 0.8
LITAF-204ENST00000570798 EYA4O95677 639 aa20.02■□□□□ 0.8
LITAF-204ENST00000570798 SF3A1Q15459 793 aaKnown RBP20.02■□□□□ 0.8
LITAF-204ENST00000570798 TWF2Q6IBS0 349 aaKnown RBP20.02■□□□□ 0.8
LITAF-204ENST00000570798 HSCBQ8IWL3 235 aa20.02■□□□□ 0.8
LITAF-204ENST00000570798 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.02■□□□□ 0.8
LITAF-204ENST00000570798 P2RX5Q93086 422 aa20.02■□□□□ 0.8
LITAF-204ENST00000570798 PRDM6Q9NQX0 595 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms