RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 TRIB2Q92519 343 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 COPS5Q92905 334 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 NAP1L5Q96NT1 182 aaPredicted RBP8.4□□□□□ -1.06
CDH13-214ENST00000569455 ACCSQ96QU6 501 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 PCYT2Q99447 389 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 SH2D3AQ9BRG2 576 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 TUBGCP2Q9BSJ2 902 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 FGFBP2Q9BYJ0 223 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 GBP3Q9H0R5 595 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 POLD4Q9HCU8 107 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 HMX1Q9NP08 348 aaPredicted RBP8.4□□□□□ -1.06
CDH13-214ENST00000569455 RTN4Q9NQC3 1192 aaKnown RBP8.4□□□□□ -1.06
CDH13-214ENST00000569455 TAB2Q9NYJ8 693 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 ERAP1Q9NZ08 941 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 CGNQ9P2M7 1197 aaKnown RBP8.4□□□□□ -1.06
CDH13-214ENST00000569455 ZNF215Q9UL58 517 aaPredicted RBP8.4□□□□□ -1.06
CDH13-214ENST00000569455 TELO2Q9Y4R8 837 aa8.4□□□□□ -1.06
CDH13-214ENST00000569455 CCDC169A6NNP5 214 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 LGALS16A8MUM7 142 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 PES1O00541 588 aaKnown RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 SLC16A3O15427 465 aaKnown RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 HBP1O60381 514 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 PPP1R37O75864 691 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 ECM2O94769 699 aaPredicted RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 NR3C1P04150 777 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 INHAP05111 366 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 LGALS2P05162 132 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 SMPD1P17405 629 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 PTGS1P23219 599 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 NR2F2P24468 414 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 MSNP26038 577 aaKnown RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 DNM2P50570 870 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 NCKAP1LP55160 1127 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 GTF2BQ00403 316 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 TNFAIP2Q03169 654 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 UBXN1Q04323 297 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 PPP2R3AQ06190 1150 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 TBC1D8BQ0IIM8 1120 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 ADAM9Q13443 819 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 MYBPC2Q14324 1141 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 PLCB4Q15147 1175 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 TARBP2Q15633 366 aaKnown RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 NFIL3Q16649 462 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 MAN2A1Q16706 1144 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 CCDC144BQ3MJ40 725 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 ZC2HC1CQ53FD0 456 aaPredicted RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 BRDTQ58F21 947 aaPredicted RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 APTXQ7Z2E3 356 aaKnown RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 ZSCAN30Q86W11 494 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 ZC3H3Q8IXZ2 948 aaKnown RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 TCP11Q8WWU5 503 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 FIZ1Q96SL8 496 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 NTPCRQ9BSD7 190 aaKnown RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 NOC4LQ9BVI4 516 aaKnown RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 POLR3FQ9H1D9 316 aaPredicted RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 VPS16Q9H269 839 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 DHX33Q9H6R0 707 aaKnown RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 METTL14Q9HCE5 456 aaKnown RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 GPRC5CQ9NQ84 441 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 KMT5AQ9NQR1 393 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 PAK6Q9NQU5 681 aaPredicted RBP8.39□□□□□ -1.07
CDH13-214ENST00000569455 XPNPEP1Q9NQW7 623 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 PDLIM7Q9NR12 457 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 TRPC6Q9Y210 931 aa8.39□□□□□ -1.07
CDH13-214ENST00000569455 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.39□□□□□ -1.07
CDH13-214ENST00000569455 COL1A2P08123 1366 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 ITIH6Q6UXX5 1313 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 PHLPP2Q6ZVD8 1323 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 A0A1W2PQC6 194 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 SOX1O00570 391 aaPredicted RBP8.38□□□□□ -1.07
CDH13-214ENST00000569455 SLC16A4O15374 487 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 SEPT4O43236 478 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 MAFO75444 373 aaPredicted RBP8.38□□□□□ -1.07
CDH13-214ENST00000569455 GJB1P08034 283 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 EPB41P11171 864 aaKnown RBP8.38□□□□□ -1.07
CDH13-214ENST00000569455 CYBAP13498 195 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 PRKAR2AP13861 404 aaKnown RBP8.38□□□□□ -1.07
CDH13-214ENST00000569455 ELNP15502 786 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 SFPQP23246 707 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDH13-214ENST00000569455 MARK3P27448 753 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 HOXD13P35453 343 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 NAMPTP43490 491 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 NPTX2P47972 431 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 MARSP56192 900 aaKnown RBP8.38□□□□□ -1.07
CDH13-214ENST00000569455 CACNB2Q08289 660 aaPredicted RBP8.38□□□□□ -1.07
CDH13-214ENST00000569455 TRIM14Q14142 442 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 HSP90AA2PQ14568 343 aaPredicted RBP8.38□□□□□ -1.07
CDH13-214ENST00000569455 DGKDQ16760 1214 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 ZNF484Q5JVG2 852 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 IER5Q5VY09 327 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 FRMD5Q7Z6J6 570 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 PPFIBP1Q86W92 1011 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 DEPTORQ8TB45 409 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 AFG1LQ8WV93 481 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 DPF3Q92784 378 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 IQCDQ96DY2 449 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 LRCH3Q96II8 777 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 MKNK1Q9BUB5 465 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 STRA6Q9BX79 667 aa8.38□□□□□ -1.07
CDH13-214ENST00000569455 AP5M1Q9H0R1 490 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms