RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 SPG21Q9NZD8 308 aa16.96■□□□□ 0.31
COMMD4-223ENST00000568301 CYP3A7-CYP3A51PA0A087WV96 503 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 H0Y858 1186 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 PSMD10O75832 226 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 REC8O95072 547 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 HOXB8P17481 243 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-223ENST00000568301 CYP3A7P24462 503 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 PBX3P40426 434 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 UGCGQ16739 394 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 Q4G0T1 1027 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 ZBTB33Q86T24 672 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 ZNF598Q86UK7 904 aaKnown RBP16.95■□□□□ 0.3
COMMD4-223ENST00000568301 TRIM22Q8IYM9 498 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 UNC45AQ9H3U1 944 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 CHST12Q9NRB3 414 aa16.95■□□□□ 0.3
COMMD4-223ENST00000568301 SPTBN4Q9H254 2564 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 DCHS1Q96JQ0 3298 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 CCT2P78371 535 aaKnown RBP16.94■□□□□ 0.3
COMMD4-223ENST00000568301 XKR3Q5GH77 459 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 CLLU1OSQ5K130 101 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 TMC7Q7Z402 723 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-223ENST00000568301 MRPL43Q8N983 215 aaKnown RBP16.94■□□□□ 0.3
COMMD4-223ENST00000568301 TBCKQ8TEA7 893 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 RSPH1Q8WYR4 309 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 SCLT1Q96NL6 688 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 TRAIPQ9BWF2 469 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 GCOM2Q9BZD3 368 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-223ENST00000568301 NCOA5Q9HCD5 579 aaKnown RBP16.94■□□□□ 0.3
COMMD4-223ENST00000568301 TSHZ2Q9NRE2 1034 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 PCDHA4Q9UN74 947 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 PLXNA3P51805 1871 aa16.94■□□□□ 0.3
COMMD4-223ENST00000568301 IGKV6-21A0A0C4DH24 114 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 EPB41L2O43491 1005 aaKnown RBP16.93■□□□□ 0.3
COMMD4-223ENST00000568301 CHMP2AO43633 222 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 ALDH7A1P49419 539 aaKnown RBP16.93■□□□□ 0.3
COMMD4-223ENST00000568301 DNM2P50570 870 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 B3GNT9Q6UX72 402 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 RUFY3Q7L099 469 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 MIER3Q7Z3K6 550 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 SLC39A11Q8N1S5 342 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 RNF169Q8NCN4 708 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 KREMEN2Q8NCW0 462 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 NLRP7Q8WX94 980 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 ZNF668Q96K58 619 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-223ENST00000568301 CEP89Q96ST8 783 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 MRPL9Q9BYD2 267 aaKnown RBP16.93■□□□□ 0.3
COMMD4-223ENST00000568301 IRF2BPLQ9H1B7 796 aa16.93■□□□□ 0.3
COMMD4-223ENST00000568301 PTPRZ1P23471 2315 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-223ENST00000568301 CARNS1A5YM72 827 aa16.92■□□□□ 0.3
COMMD4-223ENST00000568301 STBD1O95210 358 aa16.92■□□□□ 0.3
COMMD4-223ENST00000568301 SSRP1Q08945 709 aaKnown RBP16.92■□□□□ 0.3
COMMD4-223ENST00000568301 DRP2Q13474 957 aa16.92■□□□□ 0.3
COMMD4-223ENST00000568301 SMC1AQ14683 1233 aaKnown RBP16.92■□□□□ 0.3
COMMD4-223ENST00000568301 BMS1Q14692 1282 aaKnown RBP16.92■□□□□ 0.3
COMMD4-223ENST00000568301 GALNT17Q6IS24 598 aa16.92■□□□□ 0.3
COMMD4-223ENST00000568301 MOXD1Q6UVY6 613 aa16.92■□□□□ 0.3
COMMD4-223ENST00000568301 HELQQ8TDG4 1101 aa16.92■□□□□ 0.3
COMMD4-223ENST00000568301 GJA10Q969M2 543 aa16.92■□□□□ 0.3
COMMD4-223ENST00000568301 MBOAT7Q96N66 472 aa16.92■□□□□ 0.3
COMMD4-223ENST00000568301 INO80BQ9C086 356 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-223ENST00000568301 POMKQ9H5K3 350 aa16.92■□□□□ 0.3
COMMD4-223ENST00000568301 ZSWIM6Q9HCJ5 1215 aa16.92■□□□□ 0.3
COMMD4-223ENST00000568301 SEPT9Q9UHD8 586 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-223ENST00000568301 NR2E1Q9Y466 385 aa16.92■□□□□ 0.3
COMMD4-223ENST00000568301 C2orf71A6NGG8 1288 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 C2CD4DB7Z1M9 353 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 M0R2N6 131 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 DEXIO95424 95 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 BRD1O95696 1058 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 SKIP12755 728 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 FGFR4P22455 802 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 TOB2Q14106 344 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-223ENST00000568301 MTERF2Q49AM1 385 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 TPRNQ4KMQ1 711 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 ZNF410Q86VK4 478 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 BLIDQ8IZY5 108 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 DAGLBQ8NCG7 672 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 CASP10Q92851 521 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 ZNF274Q96GC6 653 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-223ENST00000568301 ADAM7Q9H2U9 754 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 SMOC2Q9H3U7 446 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 HCFC2Q9Y5Z7 792 aa16.91■□□□□ 0.3
COMMD4-223ENST00000568301 CPLX1O14810 134 aa16.9■□□□□ 0.3
COMMD4-223ENST00000568301 GALR2O43603 387 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-223ENST00000568301 MAFO75444 373 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-223ENST00000568301 CSDE1O75534 798 aaKnown RBP16.9■□□□□ 0.3
COMMD4-223ENST00000568301 TDP2O95551 362 aa16.9■□□□□ 0.3
COMMD4-223ENST00000568301 SFPQP23246 707 aaKnown RBP eCLIP16.9■□□□□ 0.3
COMMD4-223ENST00000568301 PHKA2P46019 1235 aa16.9■□□□□ 0.3
COMMD4-223ENST00000568301 BCAR1P56945 870 aa16.9■□□□□ 0.3
COMMD4-223ENST00000568301 ITIH3Q06033 890 aa16.9■□□□□ 0.3
COMMD4-223ENST00000568301 UBALD2Q8IYN6 164 aa16.9■□□□□ 0.3
COMMD4-223ENST00000568301 ETNPPLQ8TBG4 499 aa16.9■□□□□ 0.3
COMMD4-223ENST00000568301 JPH2Q9BR39 696 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-223ENST00000568301 SORCS3Q9UPU3 1222 aa16.9■□□□□ 0.3
COMMD4-223ENST00000568301 RIF1Q5UIP0 2472 aaKnown RBP16.89■□□□□ 0.29
COMMD4-223ENST00000568301 A0A087WZ62 844 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 DDX11L8A8MPP1 907 aa16.89■□□□□ 0.29
COMMD4-223ENST00000568301 PROB1E7EW31 1015 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms