RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 MAFO75444 373 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-211ENST00000568291 MED24O75448 989 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 U2AF2P26368 475 aaKnown RBP eCLIP10.63□□□□□ -0.71
SF3B3-211ENST00000568291 CDC25AP30304 524 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 YWHABP31946 246 aaKnown RBP10.63□□□□□ -0.71
SF3B3-211ENST00000568291 CRYBB1P53674 252 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-211ENST00000568291 IL17AQ16552 155 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 LONRF3Q496Y0 759 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 PAN2Q504Q3 1202 aaKnown RBP10.63□□□□□ -0.71
SF3B3-211ENST00000568291 LARP1BQ659C4 914 aaKnown RBP10.63□□□□□ -0.71
SF3B3-211ENST00000568291 MAEAQ7L5Y9 396 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 FERMT3Q86UX7 667 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 FAM228AQ86W67 206 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 RHPN2Q8IUC4 686 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 NLRP7Q8WX94 980 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 MAP7D2Q96T17 732 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 ADAM2Q99965 735 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 HSD17B14Q9BPX1 270 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 FDXACB1Q9BRP7 624 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-211ENST00000568291 ERVK-5Q9HDB9 667 aa10.63□□□□□ -0.71
SF3B3-211ENST00000568291 IGKV6-21A0A0C4DH24 114 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 PRR33A8MZF0 331 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 GRM6O15303 877 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 DCXO43602 365 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 RB1P06400 928 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 OR52Z1P0C646 297 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 LINC00271P0C7V0 271 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 SRGAP2CP0DJJ0 459 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 SPATA31C1P0DKV0 1188 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 TMOD1P28289 359 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 BMPR1AP36894 532 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 GPC3P51654 580 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 ZP2Q05996 745 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 PTGDRQ13258 359 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 BTG3Q14201 252 aaPredicted RBP10.62□□□□□ -0.71
SF3B3-211ENST00000568291 CLUL1Q15846 466 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 FAM102BQ5T8I3 360 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 PRPF31Q8WWY3 499 aaKnown RBP10.62□□□□□ -0.71
SF3B3-211ENST00000568291 NLRP4Q96MN2 994 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 LMAN2LQ9H0V9 348 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 ZSWIM4Q9H7M6 989 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 HCSTQ9UBK5 93 aa10.62□□□□□ -0.71
SF3B3-211ENST00000568291 KDM3AQ9Y4C1 1321 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 TECTAO75443 2155 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 DENND3A2RUS2 1198 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 VPS37CA5D8V6 355 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-211ENST00000568291 NCK2O43639 380 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 RPLP2P05387 115 aaKnown RBP10.61□□□□□ -0.71
SF3B3-211ENST00000568291 ALADP13716 330 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 EIF4BP23588 611 aaKnown RBP10.61□□□□□ -0.71
SF3B3-211ENST00000568291 MCM2P49736 904 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 POLGP54098 1239 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-211ENST00000568291 HYAL1Q12794 435 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 ECM1Q16610 540 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 CSPP1Q1MSJ5 1256 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 FAM173BQ6P4H8 233 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 POTEGQ6S5H5 508 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 CATSPER3Q86XQ3 398 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 ADHFE1Q8IWW8 467 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 C4orf19Q8IY42 314 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 RNF169Q8NCN4 708 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 CLP1Q92989 425 aaKnown RBP10.61□□□□□ -0.71
SF3B3-211ENST00000568291 GPRC5CQ9NQ84 441 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 XPNPEP1Q9NQW7 623 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 PRKAG3Q9UGI9 489 aa10.61□□□□□ -0.71
SF3B3-211ENST00000568291 NOL7Q9UMY1 257 aaKnown RBP10.61□□□□□ -0.71
SF3B3-211ENST00000568291 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.61□□□□□ -0.71
SF3B3-211ENST00000568291 GPR182O15218 404 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 TBX10O75333 385 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 FGFR1P11362 822 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 DARSP14868 501 aaKnown RBP10.6□□□□□ -0.71
SF3B3-211ENST00000568291 LTBRP36941 435 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 DNM2P50570 870 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 CUL4AQ13619 759 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 EMC2Q15006 297 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 ZRSR1Q15695 479 aaKnown RBP10.6□□□□□ -0.71
SF3B3-211ENST00000568291 OTUD6AQ7L8S5 288 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 NPAS4Q8IUM7 802 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 CMTR2Q8IYT2 770 aaKnown RBP10.6□□□□□ -0.71
SF3B3-211ENST00000568291 CRIPAKQ8N1N5 446 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 SLC7A3Q8WY07 619 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 ZNF689Q96CS4 500 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-211ENST00000568291 PLIN2Q99541 437 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 DHX33Q9H6R0 707 aaKnown RBP10.6□□□□□ -0.71
SF3B3-211ENST00000568291 MINDY3Q9H8M7 445 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 MRPL42Q9Y6G3 142 aaKnown RBP10.6□□□□□ -0.71
SF3B3-211ENST00000568291 SQORQ9Y6N5 450 aa10.6□□□□□ -0.71
SF3B3-211ENST00000568291 USO1O60763 962 aaKnown RBP10.59□□□□□ -0.71
SF3B3-211ENST00000568291 DKC1O60832 514 aaKnown RBP eCLIP10.59□□□□□ -0.71
SF3B3-211ENST00000568291 DGKIO75912 1065 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 GTF2F1P35269 517 aaKnown RBP eCLIP10.59□□□□□ -0.71
SF3B3-211ENST00000568291 CCT6AP40227 531 aaKnown RBP10.59□□□□□ -0.71
SF3B3-211ENST00000568291 DLX2Q07687 328 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-211ENST00000568291 LAMTOR4Q0VGL1 99 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 SMAD4Q13485 552 aaKnown RBP10.59□□□□□ -0.71
SF3B3-211ENST00000568291 DSC3Q14574 896 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 CTC1Q2NKJ3 1217 aa10.59□□□□□ -0.71
SF3B3-211ENST00000568291 FOXD4L5Q5VV16 416 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms