RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 CTNND1O60716 968 aaKnown RBP6.98□□□□□ -1.29
CAPN3-218ENST00000568153 MARCKSP29966 332 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-218ENST00000568153 SLC16A2P36021 539 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 EIF4A3P38919 411 aaKnown RBP6.98□□□□□ -1.29
CAPN3-218ENST00000568153 MRPL12P52815 198 aaKnown RBP6.98□□□□□ -1.29
CAPN3-218ENST00000568153 NAPAP54920 295 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 JAG1P78504 1218 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 ZNF174Q15697 407 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 PPM1JQ5JR12 505 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 WIPI1Q5MNZ9 446 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-218ENST00000568153 ARTNQ5T4W7 220 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 RNF43Q68DV7 783 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 WWC2Q6AWC2 1192 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 FBXL19Q6PCT2 694 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 PIK3AP1Q6ZUJ8 805 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 KCTD1Q719H9 257 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 CCDC84Q86UT8 332 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-218ENST00000568153 GAS2L3Q86XJ1 694 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 HOMER1Q86YM7 354 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 ZNF713Q8N859 430 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-218ENST00000568153 FSIP1Q8NA03 581 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 GOLM1Q8NBJ4 401 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 DAGLBQ8NCG7 672 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 CHURC1Q8WUH1 139 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 MRPS27Q92552 414 aaKnown RBP6.98□□□□□ -1.29
CAPN3-218ENST00000568153 EZH1Q92800 747 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-218ENST00000568153 ELMO3Q96BJ8 720 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 SHISA4Q96DD7 197 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 ZMYND12Q9H0C1 365 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 GLT8D2Q9H1C3 349 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 TNMDQ9H2S6 317 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 CPVLQ9H3G5 476 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 TSPY26PQ9H489 355 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 ACSS3Q9H6R3 686 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 SH2D4AQ9H788 454 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 ADAMTS1Q9UHI8 967 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 PCDHA6Q9UN73 950 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 TMX2Q9Y320 296 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 PCDHA8Q9Y5H6 950 aa6.98□□□□□ -1.29
CAPN3-218ENST00000568153 COL2A1P02458 1487 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-218ENST00000568153 CHD4Q14839 1912 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 LAMA4Q16363 1823 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 A0A1W2PRG0 241 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 FAM221AA4D161 298 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 TMEM232C9JQI7 657 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 KINO60870 393 aaKnown RBP6.97□□□□□ -1.29
CAPN3-218ENST00000568153 NDUFB10O96000 172 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 ASNSP08243 561 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 NFICP08651 508 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 NTF4P34130 210 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 EPS15P42566 896 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 RACK1P63244 317 aaKnown RBP6.97□□□□□ -1.29
CAPN3-218ENST00000568153 TRAF1Q13077 416 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 IKQ13123 557 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-218ENST00000568153 SNW1Q13573 536 aaKnown RBP6.97□□□□□ -1.29
CAPN3-218ENST00000568153 LRP8Q14114 963 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 NPY5RQ15761 445 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 GPR162Q16538 588 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 CAMK4Q16566 473 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 SHROOM1Q2M3G4 852 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-218ENST00000568153 SUPT20HL1Q3ZLR7 823 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 TTC38Q5R3I4 469 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 SNAP47Q5SQN1 464 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 AXDND1Q5T1B0 1012 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-218ENST00000568153 DCAF15Q66K64 600 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 BTNL9Q6UXG8 535 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 CYFIP1Q7L576 1253 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 ZDHHC13Q8IUH4 622 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 APOBEC3FQ8IUX4 373 aaKnown RBP6.97□□□□□ -1.29
CAPN3-218ENST00000568153 RNF214Q8ND24 703 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 ENGASEQ8NFI3 743 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 GATAD2BQ8WXI9 593 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 FERMT2Q96AC1 680 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 COA7Q96BR5 231 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 MTMR8Q96EF0 704 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 TEPSINQ96N21 525 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 SDF4Q9BRK5 362 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 NUP62CLQ9H1M0 184 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 SEMA6CQ9H3T2 930 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 CLSTN2Q9H4D0 955 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 GRPEL1Q9HAV7 217 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 RNF181Q9P0P0 153 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 ZBTB21Q9ULJ3 1066 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 PCDHB6Q9Y5E3 794 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 SRPRBQ9Y5M8 271 aaKnown RBP6.97□□□□□ -1.29
CAPN3-218ENST00000568153 MORC2Q9Y6X9 1032 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-218ENST00000568153 ZNF541Q9H0D2 1346 aa6.97□□□□□ -1.29
CAPN3-218ENST00000568153 COL4A5P29400 1685 aa6.96□□□□□ -1.29
CAPN3-218ENST00000568153 A0A1B0GVL5 298 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 ESYT2A0FGR8 921 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 PRAMEF27A3QJZ7 478 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 GFRA2O00451 464 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 GRIN3BO60391 1043 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 PLA2G6O60733 806 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 CILPO75339 1184 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 DDNO94850 711 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 ZNF202O95125 648 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 CCDC192P0DO97 292 aa6.96□□□□□ -1.3
CAPN3-218ENST00000568153 XRCC6P12956 609 aaKnown RBP eCLIP6.96□□□□□ -1.3
CAPN3-218ENST00000568153 ADCY7P51828 1080 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms