RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 MYBL2P10244 700 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 PNLIPP16233 465 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 LSSP48449 732 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 RGS3P49796 1198 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 PTPN21Q16825 1174 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 ERICH6BQ5W0A0 696 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 Q8N3U1 123 aa5.42□□□□□ -1.54
LINC00561-201ENST00000565815 FOXRED1Q96CU9 486 aaPredicted RBP5.42□□□□□ -1.54
LINC00561-201ENST00000565815 RTFDC1Q9BY42 306 aaPredicted RBP5.42□□□□□ -1.54
LINC00561-201ENST00000565815 ELL2O00472 640 aaPredicted RBP5.41□□□□□ -1.54
LINC00561-201ENST00000565815 SRGAP3O43295 1099 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 APOL3O95236 402 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 ARL4AP40617 200 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 PAN2Q504Q3 1202 aaKnown RBP5.41□□□□□ -1.54
LINC00561-201ENST00000565815 ZSWIM9Q86XI8 627 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 PROSER1Q86XN7 944 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 DCP2Q8IU60 420 aaKnown RBP5.41□□□□□ -1.54
LINC00561-201ENST00000565815 SMOC1Q9H4F8 434 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 MSRAQ9UJ68 235 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 APOBEC2Q9Y235 224 aaKnown RBP5.41□□□□□ -1.54
LINC00561-201ENST00000565815 ZNF652Q9Y2D9 606 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 FZD9O00144 591 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 GSTA4O15217 222 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 BRINP1O60477 761 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 LPLP06858 475 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 HSPA6P17066 643 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 NAT1P18440 290 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 POLD1P28340 1107 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 LIMS1P48059 325 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 SLC6A11P48066 632 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 CCT2P78371 535 aaKnown RBP5.41□□□□□ -1.54
LINC00561-201ENST00000565815 KCNMB1Q16558 191 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 CD276Q5ZPR3 534 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 EFHBQ8N7U6 833 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 DLG3Q92796 817 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 DDX11Q96FC9 970 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 AHCYL2Q96HN2 611 aaKnown RBP5.41□□□□□ -1.54
LINC00561-201ENST00000565815 ANP32EQ9BTT0 268 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 AP5M1Q9H0R1 490 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 BTBD7Q9P203 1132 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 MYOM1P52179 1685 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 QSER1Q2KHR3 1735 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 PEAK1Q9H792 1746 aa5.41□□□□□ -1.54
LINC00561-201ENST00000565815 PCDHGA12O60330 932 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 NPTXRO95502 500 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 ATF2P15336 505 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 FXR1P51114 621 aaKnown RBP eCLIP5.4□□□□□ -1.54
LINC00561-201ENST00000565815 EPHA5P54756 1037 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 SLC15A2Q16348 729 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 GPR162Q16538 588 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 SYDE2Q5VT97 1194 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 RNF219Q5W0B1 726 aaPredicted RBP5.4□□□□□ -1.54
LINC00561-201ENST00000565815 TEPPQ6URK8 271 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 RTN4RL1Q86UN2 441 aaPredicted RBP5.4□□□□□ -1.54
LINC00561-201ENST00000565815 CILP2Q8IUL8 1156 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 NETO2Q8NC67 525 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 SEC14L1Q92503 715 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 ZIM2Q9NZV7 527 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 POGKQ9P215 609 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 PCDHGA9Q9Y5G4 932 aaKnown RBP5.4□□□□□ -1.54
LINC00561-201ENST00000565815 PCDHGA8Q9Y5G5 932 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 PCDHGA7Q9Y5G6 932 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 PCDHGA6Q9Y5G7 932 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 PCDHGA3Q9Y5H0 932 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 PCDHGA2Q9Y5H1 932 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 PPP2R3BQ9Y5P8 575 aa5.4□□□□□ -1.54
LINC00561-201ENST00000565815 PHRF1Q9P1Y6 1649 aaKnown RBP5.4□□□□□ -1.54
LINC00561-201ENST00000565815 ASGR2P07307 311 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 FBLN1P23142 703 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 CT83Q5H943 113 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 ZC3H14Q6PJT7 736 aaKnown RBP5.4□□□□□ -1.55
LINC00561-201ENST00000565815 CD300LDQ6UXZ3 194 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 FMNL3Q8IVF7 1028 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 LILRA2Q8N149 483 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 NGDNQ8NEJ9 315 aaKnown RBP5.4□□□□□ -1.55
LINC00561-201ENST00000565815 FAM168AQ92567 244 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 HOOK2Q96ED9 719 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 C16orf92Q96LL3 132 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 GBP4Q96PP9 640 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 STK26Q9P289 416 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 NOB1Q9ULX3 412 aaKnown RBP5.4□□□□□ -1.55
LINC00561-201ENST00000565815 COL24A1Q17RW2 1714 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 CRB1P82279 1406 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 SPATA31E1Q6ZUB1 1445 aa5.4□□□□□ -1.55
LINC00561-201ENST00000565815 SCGB1D2O95969 90 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 C8BP07358 591 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 MYBPC3Q14896 1274 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 MPZL3Q6UWV2 235 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 EP400NLQ6ZTU2 488 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 ALG3Q92685 438 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 KCNH7Q9NS40 1196 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 ABCC6O95255 1503 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 PRAMEF22A3QJZ6 481 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 AKAP10O43572 662 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 ZEB2O60315 1214 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 CLASP2O75122 1294 aaKnown RBP5.39□□□□□ -1.55
LINC00561-201ENST00000565815 HIP1RO75146 1068 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 MPOP05164 745 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 CELA3BP08861 270 aa5.39□□□□□ -1.55
LINC00561-201ENST00000565815 PRAMEF18Q5VWM3 479 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms