RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CFAP74Q9C0B2 1584 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 DDX56Q9NY93 547 aaKnown RBP5.4□□□□□ -1.54
SMG1-211ENST00000565324 DMRT2Q9Y5R5 561 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 COL17A1Q9UMD9 1497 aaPredicted RBP5.4□□□□□ -1.54
SMG1-211ENST00000565324 CXCR5P32302 372 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 IKBIPQ70UQ0 350 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 GJA10Q969M2 543 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 SOX13Q9UN79 622 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 HPS5Q9UPZ3 1129 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 PCDHA5Q9Y5H7 936 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 CSADQ9Y600 493 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 GMEB1Q9Y692 573 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 STON1Q9Y6Q2 735 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 LAMC1P11047 1609 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.4□□□□□ -1.54
SMG1-211ENST00000565324 H2AFYO75367 372 aaKnown RBP5.4□□□□□ -1.54
SMG1-211ENST00000565324 SUPT3HO75486 399 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 MMP1P03956 469 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 STAT4Q14765 748 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 NOP9Q86U38 636 aaKnown RBP5.4□□□□□ -1.54
SMG1-211ENST00000565324 FAF2Q96CS3 445 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 PLEKHA8Q96JA3 519 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 FAM210AQ96ND0 272 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.4□□□□□ -1.542e-7■■■□□ 17.9
SMG1-211ENST00000565324 SAYSD1Q9NPB0 183 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 NBPF26B4DH59 902 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 FMNL1O95466 1100 aaPredicted RBP5.4□□□□□ -1.54
SMG1-211ENST00000565324 ANKS3Q6ZW76 656 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 NBPF15Q8N660 670 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 USP28Q96RU2 1077 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 FTOQ9C0B1 505 aaKnown RBP eCLIP5.4□□□□□ -1.54
SMG1-211ENST00000565324 CLEC11AQ9Y240 323 aa5.4□□□□□ -1.54
SMG1-211ENST00000565324 UBXN8O00124 270 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 PSMA2P25787 234 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 ADCY1Q08828 1119 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 BFSP2Q13515 415 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 DPCR1Q3MIW9 517 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 BBS7Q8IWZ6 715 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 ANKRD13CQ8N6S4 541 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 HIPK4Q8NE63 616 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 FLCNQ8NFG4 579 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 SMCR8Q8TEV9 937 aaPredicted RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 RANBP17Q9H2T7 1088 aaKnown RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 LRRC4Q9HBW1 653 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 TUBGCP4Q9UGJ1 667 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 SRPRBQ9Y5M8 271 aaKnown RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 UHRF1BP1LA0JNW5 1464 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 SNTNA6NMZ2 147 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 ALDH1B1P30837 517 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 SERPINH1P50454 418 aaKnown RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 ATXN3P54252 364 aaPredicted RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 KCNQ4P56696 695 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 KCNA1Q09470 495 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 LRIG3Q6UXM1 1119 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 CCDC149Q6ZUS6 474 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 FANCBQ8NB91 859 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 PSD3Q9NYI0 1048 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 UBAP1Q9NZ09 502 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 FAM187AA6NFU0 413 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 AKAP10O43572 662 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 MTRF1O75570 445 aaKnown RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 UFL1O94874 794 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 SEC24BO95487 1268 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 EIF6P56537 245 aaKnown RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 TFAMQ00059 246 aaKnown RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 KBTBD12Q3ZCT8 623 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 AGBL2Q5U5Z8 902 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 LRRC49Q8IUZ0 686 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 TSPAN17Q96FV3 270 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 ABHD10Q9NUJ1 306 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 H2AFY2Q9P0M6 372 aaPredicted RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 PCDHA4Q9UN74 947 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 KIAA1024Q9UPX6 916 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 RWDD3Q9Y3V2 267 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 DNMT1P26358 1616 aaKnown RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 PNMA8CA0A1B0GUJ8 204 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 ZNF197O14709 1029 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 CPA1P15085 419 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 ORC2Q13416 577 aaPredicted RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 FAM133AQ8N9E0 248 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 PNMA1Q8ND90 353 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 COG1Q8WTW3 980 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 CCDC17Q96LX7 622 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 TSSK1BQ9BXA7 367 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 SH3GLB2Q9NR46 395 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 HPCAL4Q9UM19 191 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 PDE8AO60658 829 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 LRRN2O75325 713 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 CAPN1P07384 714 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 BRAFP15056 766 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 KCNJ6P48051 423 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 ACTN3Q08043 901 aaPredicted RBP5.4□□□□□ -1.55
SMG1-211ENST00000565324 KLHL12Q53G59 568 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 ABI1Q8IZP0 508 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 RAB42Q8N4Z0 105 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 RNF139Q8WU17 664 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 VPS50Q96JG6 964 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 NRBP1Q9UHY1 535 aa5.4□□□□□ -1.55
SMG1-211ENST00000565324 TESPA1A2RU30 521 aaPredicted RBP5.39□□□□□ -1.55
SMG1-211ENST00000565324 JAK2O60674 1132 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms