RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 RNF19AQ9NV58 838 aa14.18□□□□□ -0.14
HERC2-206ENST00000564519 TMEM161AQ9NX61 479 aa14.18□□□□□ -0.14
HERC2-206ENST00000564519 TTC3P53804 2025 aa14.18□□□□□ -0.14
HERC2-206ENST00000564519 MYH9P35579 1960 aaKnown RBP14.17□□□□□ -0.14
HERC2-206ENST00000564519 GRXCR2A6NFK2 248 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 LYPLA2O95372 231 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 ZSCAN20P17040 1043 aaPredicted RBP14.17□□□□□ -0.14
HERC2-206ENST00000564519 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
HERC2-206ENST00000564519 EMC2Q15006 297 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 TCEAL5Q5H9L2 206 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 TTC38Q5R3I4 469 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 OTUD6AQ7L8S5 288 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 ZNF410Q86VK4 478 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 ECHDC2Q86YB7 292 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 NOSTRINQ8IVI9 506 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 PRPF31Q8WWY3 499 aaKnown RBP14.17□□□□□ -0.14
HERC2-206ENST00000564519 SLC7A3Q8WY07 619 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 PABPC5Q96DU9 382 aaKnown RBP14.17□□□□□ -0.14
HERC2-206ENST00000564519 JPH2Q9BR39 696 aaPredicted RBP14.17□□□□□ -0.14
HERC2-206ENST00000564519 C11orf84Q9BUA3 381 aaPredicted RBP14.17□□□□□ -0.14
HERC2-206ENST00000564519 ATP6V0A4Q9HBG4 840 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 IFT122Q9HBG6 1241 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 ALG13Q9NP73 1137 aaKnown RBP14.17□□□□□ -0.14
HERC2-206ENST00000564519 CD320Q9NPF0 282 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 XPNPEP1Q9NQW7 623 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 CLDND1Q9NY35 253 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 RWDD3Q9Y3V2 267 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 COL4A3BPQ9Y5P4 624 aa14.17□□□□□ -0.14
HERC2-206ENST00000564519 BDP1A6H8Y1 2624 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 EVPLQ92817 2033 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 MED24O75448 989 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 OR52Z1P0C646 297 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 SRGAP2CP0DJJ0 459 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 SPATA31C1P0DKV0 1188 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 DNAJB1P25685 340 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 RFC5P40937 340 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 TECP42680 631 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 TOB1P50616 345 aaPredicted RBP14.16□□□□□ -0.14
HERC2-206ENST00000564519 CDC42EP1Q00587 391 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 GNL2Q13823 731 aaKnown RBP14.16□□□□□ -0.14
HERC2-206ENST00000564519 CAMK1Q14012 370 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 FAM43BQ6ZT52 329 aaPredicted RBP14.16□□□□□ -0.14
HERC2-206ENST00000564519 C4orf32Q8N8J7 132 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 KLHL23Q8NBE8 558 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 NEK9Q8TD19 979 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 PIGOQ8TEQ8 1089 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 PLVAPQ9BX97 442 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 ELAC1Q9H777 363 aaKnown RBP14.16□□□□□ -0.14
HERC2-206ENST00000564519 MINDY3Q9H8M7 445 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 TYW1Q9NV66 732 aaKnown RBP14.16□□□□□ -0.14
HERC2-206ENST00000564519 PLAGL2Q9UPG8 496 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 PPME1Q9Y570 386 aa14.16□□□□□ -0.14
HERC2-206ENST00000564519 WDR81Q562E7 1941 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 LOXHD1Q8IVV2 1947 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 DCXO43602 365 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 ITGB1P05556 798 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 ATF7P17544 494 aaPredicted RBP14.15□□□□□ -0.14
HERC2-206ENST00000564519 SFPQP23246 707 aaKnown RBP eCLIP14.15□□□□□ -0.14
HERC2-206ENST00000564519 U2AF2P26368 475 aaKnown RBP eCLIP14.15□□□□□ -0.14
HERC2-206ENST00000564519 RARRES1P49788 294 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 LAMTOR4Q0VGL1 99 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 CLLU1OSQ5K130 101 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 LRRC55Q6ZSA7 311 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 ZNF598Q86UK7 904 aaKnown RBP14.15□□□□□ -0.14
HERC2-206ENST00000564519 CATSPER3Q86XQ3 398 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 RNF169Q8NCN4 708 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 SPPL3Q8TCT6 385 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 PSPC1Q8WXF1 523 aaKnown RBP14.15□□□□□ -0.14
HERC2-206ENST00000564519 CASD1Q96PB1 797 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 MTRQ99707 1265 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 LMAN2LQ9H0V9 348 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 CWH43Q9H720 699 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 C11orf16Q9NQ32 467 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 ANKEF1Q9NU02 776 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 PRKAG3Q9UGI9 489 aa14.15□□□□□ -0.14
HERC2-206ENST00000564519 A0A0U1RQF3 1178 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 GJB2P29033 226 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 IRS1P35568 1242 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 TRAPPC10P48553 1259 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 ORC2Q13416 577 aaPredicted RBP14.14□□□□□ -0.15
HERC2-206ENST00000564519 LONRF3Q496Y0 759 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 SPOUT1Q5T280 376 aaKnown RBP14.14□□□□□ -0.15
HERC2-206ENST00000564519 CATSPER4Q7RTX7 472 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 FERMT3Q86UX7 667 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 RNF149Q8NC42 400 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 ASAP3Q8TDY4 903 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 P2RX5Q93086 422 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 PPP2R3CQ969Q6 453 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 TMEM117Q9H0C3 514 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 CHST12Q9NRB3 414 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 PIN4Q9Y237 131 aaKnown RBP14.14□□□□□ -0.15
HERC2-206ENST00000564519 PCDHB6Q9Y5E3 794 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 PCDHGC5Q9Y5F6 944 aa14.14□□□□□ -0.15
HERC2-206ENST00000564519 MEIS3P2A8K0S8 358 aa14.13□□□□□ -0.15
HERC2-206ENST00000564519 PHKA2P46019 1235 aa14.13□□□□□ -0.15
HERC2-206ENST00000564519 ECM1Q16610 540 aa14.13□□□□□ -0.15
HERC2-206ENST00000564519 TWF2Q6IBS0 349 aaKnown RBP14.13□□□□□ -0.15
HERC2-206ENST00000564519 EXOC8Q8IYI6 725 aa14.13□□□□□ -0.15
HERC2-206ENST00000564519 HELQQ8TDG4 1101 aa14.13□□□□□ -0.15
HERC2-206ENST00000564519 POF1BQ8WVV4 589 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms