RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 C4orf19Q8IY42 314 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 MICAL1Q8TDZ2 1067 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 HAS1Q92839 578 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 GTF3C6Q969F1 213 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 MSLNLQ96KJ4 702 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 ZNF558Q96NG5 402 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 TLE6Q9H808 572 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 CYP26B1Q9NR63 512 aa16.81■□□□□ 0.28
SPG7-210ENST00000564409 EML1O00423 815 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 MBTPS2O43462 519 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 SRGAP2BP0DMP2 458 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 IRS1P35568 1242 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 NRIP1P48552 1158 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 RAB27AP51159 221 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 DLX2Q07687 328 aaPredicted RBP16.8■□□□□ 0.28
SPG7-210ENST00000564409 KCNT2Q6UVM3 1135 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 OXER1Q8TDS5 423 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 TCP11Q8WWU5 503 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 MRPS27Q92552 414 aaKnown RBP16.8■□□□□ 0.28
SPG7-210ENST00000564409 LRFN3Q9BTN0 628 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 DHX33Q9H6R0 707 aaKnown RBP16.8■□□□□ 0.28
SPG7-210ENST00000564409 NGRNQ9NPE2 291 aaKnown RBP16.8■□□□□ 0.28
SPG7-210ENST00000564409 RNF19AQ9NV58 838 aa16.8■□□□□ 0.28
SPG7-210ENST00000564409 A0A087WZ62 844 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 FSCN2O14926 492 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 ASAP2O43150 1006 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 FDPSP14324 419 aaKnown RBP16.79■□□□□ 0.28
SPG7-210ENST00000564409 GTF2F1P35269 517 aaKnown RBP eCLIP16.79■□□□□ 0.28
SPG7-210ENST00000564409 NEK4P51957 841 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 DRP2Q13474 957 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 TRIM29Q14134 588 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 BMS1Q14692 1282 aaKnown RBP16.79■□□□□ 0.28
SPG7-210ENST00000564409 ME3Q16798 604 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 ADGRD2Q7Z7M1 963 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 SMRP1Q8NCR6 262 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 CEP170P1Q96L14 293 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 FDXACB1Q9BRP7 624 aaPredicted RBP16.79■□□□□ 0.28
SPG7-210ENST00000564409 ZSWIM4Q9H7M6 989 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 SPG21Q9NZD8 308 aa16.79■□□□□ 0.28
SPG7-210ENST00000564409 TMEM150BA6NC51 233 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 LINC01565O15544 149 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 DCXO43602 365 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 ZNF623O75123 536 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 YWHABP31946 246 aaKnown RBP16.78■□□□□ 0.28
SPG7-210ENST00000564409 PHKA2P46019 1235 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 POLGP54098 1239 aaPredicted RBP16.78■□□□□ 0.28
SPG7-210ENST00000564409 PCBP1Q15365 356 aaKnown RBP eCLIP16.78■□□□□ 0.28
SPG7-210ENST00000564409 CLLU1OSQ5K130 101 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 TWF2Q6IBS0 349 aaKnown RBP16.78■□□□□ 0.28
SPG7-210ENST00000564409 TMEM184AQ6ZMB5 413 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 LRRC55Q6ZSA7 311 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 SRGAP1Q7Z6B7 1085 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 RNF169Q8NCN4 708 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 PSPC1Q8WXF1 523 aaKnown RBP16.78■□□□□ 0.28
SPG7-210ENST00000564409 KHSRPQ92945 711 aaKnown RBP eCLIP16.78■□□□□ 0.28
SPG7-210ENST00000564409 TNFRSF25Q93038 417 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 ZNF668Q96K58 619 aaPredicted RBP16.78■□□□□ 0.28
SPG7-210ENST00000564409 LXNQ9BS40 222 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 CLEC1BQ9P126 229 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 PCDHA12Q9UN75 941 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 HCN4Q9Y3Q4 1203 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
SPG7-210ENST00000564409 ARID2Q68CP9 1835 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 CSPG5O95196 566 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 ATF7P17544 494 aaPredicted RBP16.77■□□□□ 0.28
SPG7-210ENST00000564409 ALDH7A1P49419 539 aaKnown RBP16.77■□□□□ 0.28
SPG7-210ENST00000564409 ERVFC1P60507 584 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 SPIRE1Q08AE8 756 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 DUSP6Q16828 381 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 PLA2G4FQ68DD2 849 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 CATSPER4Q7RTX7 472 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 RBM23Q86U06 439 aaKnown RBP16.77■□□□□ 0.28
SPG7-210ENST00000564409 POTEDQ86YR6 584 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 NECAB1Q8N987 351 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 NSUN7Q8NE18 718 aaKnown RBP16.77■□□□□ 0.28
SPG7-210ENST00000564409 NLRP4Q96MN2 994 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 IFT122Q9HBG6 1241 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 GJB4Q9NTQ9 266 aa16.77■□□□□ 0.28
SPG7-210ENST00000564409 PRR33A8MZF0 331 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 CSDE1O75534 798 aaKnown RBP16.76■□□□□ 0.27
SPG7-210ENST00000564409 LYPLA2O95372 231 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 FGFR4P22455 802 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 NPEPPSP55786 919 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 NR5A1Q13285 461 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 MXD4Q14582 209 aaPredicted RBP16.76■□□□□ 0.27
SPG7-210ENST00000564409 CLUL1Q15846 466 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 NCAPH2Q6IBW4 605 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 GLB1LQ6UWU2 654 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 HELQQ8TDG4 1101 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 PRPF31Q8WWY3 499 aaKnown RBP16.76■□□□□ 0.27
SPG7-210ENST00000564409 PGBD4Q96DM1 585 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 SH2D3AQ9BRG2 576 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 ENTPD7Q9NQZ7 604 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 FAM105AQ9NUU6 356 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 HCSTQ9UBK5 93 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 STK39Q9UEW8 545 aa16.76■□□□□ 0.27
SPG7-210ENST00000564409 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
SPG7-210ENST00000564409 GLP2RO95838 553 aa16.75■□□□□ 0.27
SPG7-210ENST00000564409 POU5F1BQ06416 359 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms