RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 NECTIN1Q15223 517 aa20.59■□□□□ 0.89
E4F1-203ENST00000563643 RALYLQ86SE5 291 aaKnown RBP20.59■□□□□ 0.89
E4F1-203ENST00000563643 DDX53Q86TM3 631 aaKnown RBP20.59■□□□□ 0.89
E4F1-203ENST00000563643 NCOA7Q8NI08 942 aa20.59■□□□□ 0.89
E4F1-203ENST00000563643 HELQQ8TDG4 1101 aa20.59■□□□□ 0.89
E4F1-203ENST00000563643 STAMQ92783 540 aa20.59■□□□□ 0.89
E4F1-203ENST00000563643 CUL5Q93034 780 aa20.59■□□□□ 0.89
E4F1-203ENST00000563643 MRPL9Q9BYD2 267 aaKnown RBP20.59■□□□□ 0.89
E4F1-203ENST00000563643 SLC9A2Q9UBY0 812 aa20.59■□□□□ 0.89
E4F1-203ENST00000563643 ANGPTL2Q9UKU9 493 aa20.59■□□□□ 0.89
E4F1-203ENST00000563643 CLUHO75153 1309 aa20.58■□□□□ 0.89
E4F1-203ENST00000563643 PIK3CDO00329 1044 aa20.58■□□□□ 0.89
E4F1-203ENST00000563643 ZC3H11AO75152 810 aaKnown RBP eCLIP20.58■□□□□ 0.89
E4F1-203ENST00000563643 STARD6P59095 220 aa20.58■□□□□ 0.89
E4F1-203ENST00000563643 NETO1Q8TDF5 533 aa20.58■□□□□ 0.89
E4F1-203ENST00000563643 MYADMQ96S97 322 aa20.58■□□□□ 0.89
E4F1-203ENST00000563643 BCO2Q9BYV7 579 aa20.58■□□□□ 0.89
E4F1-203ENST00000563643 WDR6Q9NNW5 1121 aaKnown RBP20.58■□□□□ 0.89
E4F1-203ENST00000563643 SLC2A4RGQ9NR83 387 aa20.58■□□□□ 0.89
E4F1-203ENST00000563643 UBIAD1Q9Y5Z9 338 aa20.58■□□□□ 0.89
E4F1-203ENST00000563643 SLC30A4O14863 429 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 SLC27A2O14975 620 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 LILRB5O75023 590 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 KLRC2P26717 231 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 ACTR2P61160 394 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 GRM4Q14833 912 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 WTAPQ15007 396 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 CREB3L3Q68CJ9 461 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 CYB5R4Q7L1T6 521 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 BCL7CQ8WUZ0 217 aaPredicted RBP20.57■□□□□ 0.88
E4F1-203ENST00000563643 PIBF1Q8WXW3 757 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 IGSF21Q96ID5 467 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 ZSCAN32Q9NX65 697 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 GMEB2Q9UKD1 530 aa20.57■□□□□ 0.88
E4F1-203ENST00000563643 ZSCAN20P17040 1043 aaPredicted RBP20.56■□□□□ 0.88
E4F1-203ENST00000563643 SLC26A2P50443 739 aa20.56■□□□□ 0.88
E4F1-203ENST00000563643 SEC23AQ15436 765 aa20.56■□□□□ 0.88
E4F1-203ENST00000563643 RNF20Q5VTR2 975 aa20.56■□□□□ 0.88
E4F1-203ENST00000563643 CMASQ8NFW8 434 aaPredicted RBP20.56■□□□□ 0.88
E4F1-203ENST00000563643 COL26A1Q96A83 441 aa20.56■□□□□ 0.88
E4F1-203ENST00000563643 SHDQ96IW2 340 aa20.56■□□□□ 0.88
E4F1-203ENST00000563643 KLHL5Q96PQ7 755 aa20.56■□□□□ 0.88
E4F1-203ENST00000563643 EMILIN2Q9BXX0 1053 aa20.56■□□□□ 0.88
E4F1-203ENST00000563643 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.56■□□□□ 0.88
E4F1-203ENST00000563643 BAZ2BQ9UIF8 2168 aaKnown RBP20.55■□□□□ 0.88
E4F1-203ENST00000563643 MAFGO15525 162 aa20.55■□□□□ 0.88
E4F1-203ENST00000563643 TBC1D4O60343 1298 aa20.55■□□□□ 0.88
E4F1-203ENST00000563643 GPR32O75388 356 aa20.55■□□□□ 0.88
E4F1-203ENST00000563643 VTNP04004 478 aa20.55■□□□□ 0.88
E4F1-203ENST00000563643 KANSL1LA0AUZ9 987 aa20.54■□□□□ 0.88
E4F1-203ENST00000563643 HBP1O60381 514 aa20.54■□□□□ 0.88
E4F1-203ENST00000563643 CNPP09543 421 aaKnown RBP20.54■□□□□ 0.88
E4F1-203ENST00000563643 ZNF598Q86UK7 904 aaKnown RBP20.54■□□□□ 0.88
E4F1-203ENST00000563643 MB21D2Q8IYB1 491 aaPredicted RBP20.54■□□□□ 0.88
E4F1-203ENST00000563643 NELL1Q92832 810 aa20.54■□□□□ 0.88
E4F1-203ENST00000563643 VN1R3Q9BXE9 311 aa20.54■□□□□ 0.88
E4F1-203ENST00000563643 JADE2Q9NQC1 790 aa20.54■□□□□ 0.88
E4F1-203ENST00000563643 MAN1C1Q9NR34 630 aa20.54■□□□□ 0.88
E4F1-203ENST00000563643 COL1A2P08123 1366 aa20.54■□□□□ 0.88
E4F1-203ENST00000563643 PATJQ8NI35 1801 aa20.53■□□□□ 0.88
E4F1-203ENST00000563643 A0A0U1RQF3 1178 aa20.53■□□□□ 0.88
E4F1-203ENST00000563643 CCDC195A0A1B0GUA6 201 aa20.53■□□□□ 0.88
E4F1-203ENST00000563643 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.53■□□□□ 0.88
E4F1-203ENST00000563643 ANHXE9PGG2 379 aa20.53■□□□□ 0.88
E4F1-203ENST00000563643 REC8O95072 547 aa20.53■□□□□ 0.88
E4F1-203ENST00000563643 KCNA4P22459 653 aa20.53■□□□□ 0.88
E4F1-203ENST00000563643 SPEM2Q0P670 501 aa20.53■□□□□ 0.88
E4F1-203ENST00000563643 HTR4Q13639 388 aa20.53■□□□□ 0.88
E4F1-203ENST00000563643 SART3Q15020 963 aaKnown RBP20.53■□□□□ 0.88
E4F1-203ENST00000563643 RHOBTB2Q9BYZ6 727 aa20.53■□□□□ 0.88
E4F1-203ENST00000563643 NUMBLQ9Y6R0 609 aa20.53■□□□□ 0.88
E4F1-203ENST00000563643 SETXQ7Z333 2677 aaKnown RBP20.52■□□□□ 0.88
E4F1-203ENST00000563643 ERICH2A1L162 156 aa20.52■□□□□ 0.88
E4F1-203ENST00000563643 CARNS1A5YM72 827 aa20.52■□□□□ 0.88
E4F1-203ENST00000563643 ZBTB42B2RXF5 422 aa20.52■□□□□ 0.88
E4F1-203ENST00000563643 IFIT3O14879 490 aaKnown RBP20.52■□□□□ 0.88
E4F1-203ENST00000563643 LAMP2P13473 410 aa20.52■□□□□ 0.88
E4F1-203ENST00000563643 ANTXR2P58335 489 aa20.52■□□□□ 0.88
E4F1-203ENST00000563643 SNW1Q13573 536 aaKnown RBP20.52■□□□□ 0.88
E4F1-203ENST00000563643 CYP26C1Q6V0L0 522 aa20.52■□□□□ 0.88
E4F1-203ENST00000563643 SDF4Q9BRK5 362 aa20.52■□□□□ 0.88
E4F1-203ENST00000563643 MTA3Q9BTC8 594 aa20.52■□□□□ 0.88
E4F1-203ENST00000563643 DDX23Q9BUQ8 820 aaKnown RBP20.52■□□□□ 0.88
E4F1-203ENST00000563643 KCNH7Q9NS40 1196 aa20.52■□□□□ 0.88
E4F1-203ENST00000563643 MTF2Q9Y483 593 aaPredicted RBP20.52■□□□□ 0.88
E4F1-203ENST00000563643 COL4A3Q01955 1670 aa20.51■□□□□ 0.87
E4F1-203ENST00000563643 INPPL1O15357 1258 aa20.51■□□□□ 0.87
E4F1-203ENST00000563643 C22orf31O95567 290 aa20.51■□□□□ 0.87
E4F1-203ENST00000563643 SSBP05455 408 aaKnown RBP eCLIP20.51■□□□□ 0.87
E4F1-203ENST00000563643 PMLP29590 882 aa20.51■□□□□ 0.87
E4F1-203ENST00000563643 UBXN2BQ14CS0 331 aa20.51■□□□□ 0.87
E4F1-203ENST00000563643 TSGA10IPQ3SY00 556 aa20.51■□□□□ 0.87
E4F1-203ENST00000563643 ZNF484Q5JVG2 852 aa20.51■□□□□ 0.87
E4F1-203ENST00000563643 TSSK4Q6SA08 328 aa20.51■□□□□ 0.87
E4F1-203ENST00000563643 METTL13Q8N6R0 699 aa20.51■□□□□ 0.87
E4F1-203ENST00000563643 ST13P5Q8NFI4 369 aaPredicted RBP20.51■□□□□ 0.87
E4F1-203ENST00000563643 BBXQ8WY36 941 aaPredicted RBP20.51■□□□□ 0.87
E4F1-203ENST00000563643 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.51■□□□□ 0.87
E4F1-203ENST00000563643 MIA3Q5JRA6 1907 aa20.51■□□□□ 0.87
E4F1-203ENST00000563643 NFASCO94856 1347 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms