RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 VPS16Q9H269 839 aa15.45■□□□□ 0.06
SPG7-206ENST00000562775 SAGE1Q9NXZ1 904 aa15.45■□□□□ 0.06
SPG7-206ENST00000562775 IMPACTQ9P2X3 320 aa15.45■□□□□ 0.06
SPG7-206ENST00000562775 SRRDQ9UH36 339 aa15.45■□□□□ 0.06
SPG7-206ENST00000562775 COL1A2P08123 1366 aa15.44■□□□□ 0.06
SPG7-206ENST00000562775 NR3C1P04150 777 aa15.44■□□□□ 0.06
SPG7-206ENST00000562775 TPM2P07951 284 aa15.44■□□□□ 0.06
SPG7-206ENST00000562775 INSRRP14616 1297 aa15.44■□□□□ 0.06
SPG7-206ENST00000562775 GLRA2P23416 452 aa15.44■□□□□ 0.06
SPG7-206ENST00000562775 MTIF2P46199 727 aaKnown RBP15.44■□□□□ 0.06
SPG7-206ENST00000562775 CPT1AP50416 773 aa15.44■□□□□ 0.06
SPG7-206ENST00000562775 BRDTQ58F21 947 aaPredicted RBP15.44■□□□□ 0.06
SPG7-206ENST00000562775 TRPV1Q8NER1 839 aa15.44■□□□□ 0.06
SPG7-206ENST00000562775 ASAP3Q8TDY4 903 aa15.44■□□□□ 0.06
SPG7-206ENST00000562775 CGNQ9P2M7 1197 aaKnown RBP15.44■□□□□ 0.06
SPG7-206ENST00000562775 EXOC7Q9UPT5 735 aa15.44■□□□□ 0.06
SPG7-206ENST00000562775 DENND3A2RUS2 1198 aa15.43■□□□□ 0.06
SPG7-206ENST00000562775 TEX33O43247 280 aa15.43■□□□□ 0.06
SPG7-206ENST00000562775 DUSP11O75319 330 aaKnown RBP15.43■□□□□ 0.06
SPG7-206ENST00000562775 NAMPTP43490 491 aa15.43■□□□□ 0.06
SPG7-206ENST00000562775 MARSP56192 900 aaKnown RBP15.43■□□□□ 0.06
SPG7-206ENST00000562775 SNRPFP62306 86 aaKnown RBP15.43■□□□□ 0.06
SPG7-206ENST00000562775 MYBPC2Q14324 1141 aa15.43■□□□□ 0.06
SPG7-206ENST00000562775 TMC6Q7Z403 805 aa15.43■□□□□ 0.06
SPG7-206ENST00000562775 MAP4K3Q8IVH8 894 aa15.43■□□□□ 0.06
SPG7-206ENST00000562775 LENG1Q96BZ8 264 aaPredicted RBP15.43■□□□□ 0.06
SPG7-206ENST00000562775 ERO1AQ96HE7 468 aa15.43■□□□□ 0.06
SPG7-206ENST00000562775 AGPAT3Q9NRZ7 376 aa15.43■□□□□ 0.06
SPG7-206ENST00000562775 ARHGAP28Q9P2N2 729 aa15.43■□□□□ 0.06
SPG7-206ENST00000562775 TBX20Q9UMR3 447 aa15.43■□□□□ 0.06
SPG7-206ENST00000562775 LGALS16A8MUM7 142 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 CLIC2O15247 247 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 MAGEB2O15479 319 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 FKTNO75072 461 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 PRKCSHP14314 528 aaPredicted RBP15.42■□□□□ 0.06
SPG7-206ENST00000562775 PBX1P40424 430 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 ARHGEF6Q15052 776 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 MAN2A1Q16706 1144 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 CCDC40Q4G0X9 1142 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 CCDC186Q7Z3E2 898 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 SLC9A9Q8IVB4 645 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 TMEM174Q8WUU8 243 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 TRAPPC12Q8WVT3 735 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 PSPC1Q8WXF1 523 aaKnown RBP15.42■□□□□ 0.06
SPG7-206ENST00000562775 KIFC3Q9BVG8 833 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 IKZF4Q9H2S9 585 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 SUGCTQ9HAC7 445 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 ADGRA3Q8IWK6 1321 aa15.42■□□□□ 0.06
SPG7-206ENST00000562775 SLC16A3O15427 465 aaKnown RBP15.41■□□□□ 0.06
SPG7-206ENST00000562775 SEPT4O43236 478 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 C22orf31O95567 290 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 F2P00734 622 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 DNM2P50570 870 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 CACNB2Q08289 660 aaPredicted RBP15.41■□□□□ 0.06
SPG7-206ENST00000562775 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
SPG7-206ENST00000562775 DRP2Q13474 957 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 MXD4Q14582 209 aaPredicted RBP15.41■□□□□ 0.06
SPG7-206ENST00000562775 C12orf56Q8IXR9 622 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 RETREG2Q8NC44 543 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 PRPF31Q8WWY3 499 aaKnown RBP15.41■□□□□ 0.06
SPG7-206ENST00000562775 MKNK1Q9BUB5 465 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 NOC4LQ9BVI4 516 aaKnown RBP15.41■□□□□ 0.06
SPG7-206ENST00000562775 DMAC2Q9NW81 257 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 LRRIQ4A6NIV6 560 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 ASAP2O43150 1006 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 KLRC1P26715 233 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 GSDMDP57764 484 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 UBXN1Q04323 297 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 PPFIA1Q13136 1202 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 CAPSQ13938 189 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 FSCN1Q16658 493 aaKnown RBP15.41■□□□□ 0.06
SPG7-206ENST00000562775 MIIPQ5JXC2 388 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 SPECC1LQ69YQ0 1117 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 EFCAB12Q6NXP0 572 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 FRMD5Q7Z6J6 570 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 TRIM59Q8IWR1 403 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 LRRC71Q8N4P6 559 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 DEPTORQ8TB45 409 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 KAT2BQ92831 832 aa15.41■□□□□ 0.06
SPG7-206ENST00000562775 METTL14Q9HCE5 456 aaKnown RBP15.41■□□□□ 0.06
SPG7-206ENST00000562775 RRN3P2A6NIE6 340 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 ADCY3O60266 1144 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 KPNA6O60684 536 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 AKAP3O75969 853 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 HMGCRP04035 888 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 EPB41P11171 864 aaKnown RBP15.4■□□□□ 0.06
SPG7-206ENST00000562775 ELNP15502 786 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 CNGA1P29973 690 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 GJA9P57773 515 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 IGBP1P78318 339 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 TRIM32Q13049 653 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 VWA3BQ502W6 1294 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 CEP135Q66GS9 1140 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 PXYLP1Q8TE99 480 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 UPF3AQ9H1J1 476 aaKnown RBP15.4■□□□□ 0.06
SPG7-206ENST00000562775 NDST4Q9H3R1 872 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 TMEM134Q9H6X4 195 aa15.4■□□□□ 0.06
SPG7-206ENST00000562775 SUCLA2Q9P2R7 463 aaPredicted RBP15.4■□□□□ 0.06
SPG7-206ENST00000562775 ARMCX3Q9UH62 379 aaPredicted RBP15.4■□□□□ 0.06
SPG7-206ENST00000562775 ITIH6Q6UXX5 1313 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms