RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 CARNS1A5YM72 827 aa16.37■□□□□ 0.21
SPG7-205ENST00000561945 MAFO75444 373 aaPredicted RBP16.37■□□□□ 0.21
SPG7-205ENST00000561945 TDP2O95551 362 aa16.37■□□□□ 0.21
SPG7-205ENST00000561945 IBSPP21815 317 aaPredicted RBP16.37■□□□□ 0.21
SPG7-205ENST00000561945 SSRP1Q08945 709 aaKnown RBP16.37■□□□□ 0.21
SPG7-205ENST00000561945 MIER3Q7Z3K6 550 aa16.37■□□□□ 0.21
SPG7-205ENST00000561945 ABI1Q8IZP0 508 aa16.37■□□□□ 0.21
SPG7-205ENST00000561945 MRPL43Q8N983 215 aaKnown RBP16.37■□□□□ 0.21
SPG7-205ENST00000561945 GJA10Q969M2 543 aa16.37■□□□□ 0.21
SPG7-205ENST00000561945 IRAK3Q9Y616 596 aa16.37■□□□□ 0.21
SPG7-205ENST00000561945 TMEM221A6NGB7 291 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 M0R296 226 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 CHMP2AO43633 222 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 ZNF623O75123 536 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 SIGLEC14Q08ET2 396 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 PLPP4Q5VZY2 271 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 ANO5Q75V66 913 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 NLRP7Q8WX94 980 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 GCOM2Q9BZD3 368 aaPredicted RBP16.36■□□□□ 0.21
SPG7-205ENST00000561945 KCNMB3Q9NPA1 279 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 ENTPD7Q9NQZ7 604 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 MYO15AQ9UKN7 3530 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 ZDBF2Q9HCK1 2354 aa16.36■□□□□ 0.21
SPG7-205ENST00000561945 C2orf71A6NGG8 1288 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 FGFR4P22455 802 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 PBX3P40426 434 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 TECP42680 631 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 PHKA2P46019 1235 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 PPP2R5CQ13362 524 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 SMC1AQ14683 1233 aaKnown RBP16.35■□□□□ 0.21
SPG7-205ENST00000561945 PPP4R3AQ6IN85 833 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 ALYREFQ86V81 257 aaKnown RBP16.35■□□□□ 0.21
SPG7-205ENST00000561945 HELQQ8TDG4 1101 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 CASP10Q92851 521 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 ASIC4Q96FT7 647 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 INO80BQ9C086 356 aaPredicted RBP16.35■□□□□ 0.21
SPG7-205ENST00000561945 SEPT9Q9UHD8 586 aaPredicted RBP16.35■□□□□ 0.21
SPG7-205ENST00000561945 PPME1Q9Y570 386 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 ARID2Q68CP9 1835 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 DENND4AQ7Z401 1863 aa16.35■□□□□ 0.21
SPG7-205ENST00000561945 DMDP11532 3685 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 A0A087WZ62 844 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 SKIP12755 728 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 SFPQP23246 707 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPG7-205ENST00000561945 DNM2P50570 870 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 BCAR1P56945 870 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 PSMC5P62195 406 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 NONOQ15233 471 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPG7-205ENST00000561945 PTPN21Q16825 1174 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 MTERF2Q49AM1 385 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 ZNF668Q96K58 619 aaPredicted RBP16.34■□□□□ 0.21
SPG7-205ENST00000561945 RPGRIP1Q96KN7 1286 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 FAM20AQ96MK3 541 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 PRRX2Q99811 253 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 FDXACB1Q9BRP7 624 aaPredicted RBP16.34■□□□□ 0.21
SPG7-205ENST00000561945 PHF20Q9BVI0 1012 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 IFT122Q9HBG6 1241 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 DDX25Q9UHL0 483 aaKnown RBP16.34■□□□□ 0.21
SPG7-205ENST00000561945 VAV3Q9UKW4 847 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 HCFC2Q9Y5Z7 792 aa16.34■□□□□ 0.21
SPG7-205ENST00000561945 TMEM150BA6NC51 233 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 SLC37A4O43826 429 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 CLASP2O75122 1294 aaKnown RBP16.33■□□□□ 0.2
SPG7-205ENST00000561945 ALDH7A1P49419 539 aaKnown RBP16.33■□□□□ 0.2
SPG7-205ENST00000561945 MRE11P49959 708 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 RAB27AP51159 221 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 POLGP54098 1239 aaPredicted RBP16.33■□□□□ 0.2
SPG7-205ENST00000561945 ITIH3Q06033 890 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 KRT25Q7Z3Z0 450 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 TMC7Q7Z402 723 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 FBXL6Q8N531 539 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 PBXIP1Q96AQ6 731 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 AIFM3Q96NN9 605 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 NECTIN4Q96NY8 510 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 JPH2Q9BR39 696 aaPredicted RBP16.33■□□□□ 0.2
SPG7-205ENST00000561945 ZBP1Q9H171 429 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 ADAM7Q9H2U9 754 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 FAM105AQ9NUU6 356 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 SUCLA2Q9P2R7 463 aaPredicted RBP16.33■□□□□ 0.2
SPG7-205ENST00000561945 STK36Q9NRP7 1315 aa16.33■□□□□ 0.2
SPG7-205ENST00000561945 EML1O00423 815 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 CPLX1O14810 134 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 TBX3O15119 743 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 CSDE1O75534 798 aaKnown RBP16.32■□□□□ 0.2
SPG7-205ENST00000561945 GCFC2P16383 781 aaKnown RBP16.32■□□□□ 0.2
SPG7-205ENST00000561945 QARSP47897 775 aaKnown RBP16.32■□□□□ 0.2
SPG7-205ENST00000561945 GIT2Q14161 759 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 TPRNQ4KMQ1 711 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 DDX53Q86TM3 631 aaKnown RBP16.32■□□□□ 0.2
SPG7-205ENST00000561945 RHPN2Q8IUC4 686 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 RNF169Q8NCN4 708 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 PRSS33Q8NF86 280 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 SCLT1Q96NL6 688 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 DHX33Q9H6R0 707 aaKnown RBP16.32■□□□□ 0.2
SPG7-205ENST00000561945 CYP26B1Q9NR63 512 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 AGPAT5Q9NUQ2 364 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 TBC1D13Q9NVG8 400 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 CFAP54Q96N23 3096 aa16.32■□□□□ 0.2
SPG7-205ENST00000561945 DKC1O60832 514 aaKnown RBP eCLIP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms