RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 MYOCDQ8IZQ8 938 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 ABRAQ8N0Z2 381 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 GLIS3Q8NEA6 775 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 FBXO22Q8NEZ5 403 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 MORC4Q8TE76 937 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 NOC3LQ8WTT2 800 aaKnown RBP8.31□□□□□ -1.08
TPM1-231ENST00000561395 NAP1L5Q96NT1 182 aaPredicted RBP8.31□□□□□ -1.08
TPM1-231ENST00000561395 DUSP9Q99956 384 aaKnown RBP8.31□□□□□ -1.08
TPM1-231ENST00000561395 FGFBP2Q9BYJ0 223 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 THAP9Q9H5L6 903 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 SLC28A3Q9HAS3 691 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 XPNPEP3Q9NQH7 507 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 SLC9A2Q9UBY0 812 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 LIMA1Q9UHB6 759 aaKnown RBP8.31□□□□□ -1.08
TPM1-231ENST00000561395 ODF2LQ9ULJ1 636 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 COL4A3BPQ9Y5P4 624 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 TANC1Q9C0D5 1861 aa8.31□□□□□ -1.08
TPM1-231ENST00000561395 MYH9P35579 1960 aaKnown RBP8.31□□□□□ -1.08
TPM1-231ENST00000561395 IGSF9BQ9UPX0 1349 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 A0A1B0GTH6 734 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 DCDC2CA8MYV0 355 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 RSPH10B2B2RC85 870 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 KCNJ18B7U540 433 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 FAM13AO94988 1023 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 KIF20AO95235 890 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 PGK1P00558 417 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 PSAPP07602 524 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 RSPH10BP0C881 870 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 TGFB3P10600 412 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 RARBP10826 455 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 GAP43P17677 238 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 PTGS1P23219 599 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 ZNF131P52739 623 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 ACTR2P61160 394 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 PSMC5P62195 406 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 LRRC63Q05C16 580 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 KCNJ12Q14500 433 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 KRT31Q15323 416 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 CCDC144BQ3MJ40 725 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 ZCWPW2Q504Y3 356 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 TCP11X2Q5H9J9 407 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 ANKRD40Q6AI12 368 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 PSRC1Q6PGN9 363 aaPredicted RBP8.3□□□□□ -1.08
TPM1-231ENST00000561395 ABHD15Q6UXT9 468 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 SEPT14Q6ZU15 432 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 C16orf59Q7L2K0 433 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 EPM2AIP1Q7L775 607 aaPredicted RBP8.3□□□□□ -1.08
TPM1-231ENST00000561395 ANKRD33Q7Z3H0 272 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 TMC6Q7Z403 805 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 RNF180Q86T96 592 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 ZSCAN30Q86W11 494 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 SFR1Q86XK3 245 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 IRF2BP1Q8IU81 584 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 VSTM4Q8IW00 320 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 CSGALNACT2Q8N6G5 542 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 ATP6V0A1Q93050 837 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 CTAGE1Q96RT6 745 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 BCAS3Q9H6U6 928 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 OLFML3Q9NRN5 406 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 ANKEF1Q9NU02 776 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 IMPACTQ9P2X3 320 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 SEL1LQ9UBV2 794 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 NRBP1Q9UHY1 535 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 TBX21Q9UL17 535 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 YBX2Q9Y2T7 364 aaKnown RBP8.3□□□□□ -1.08
TPM1-231ENST00000561395 PCDHA10Q9Y5I2 948 aa8.3□□□□□ -1.08
TPM1-231ENST00000561395 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.3□□□□□ -1.08
TPM1-231ENST00000561395 UBE4BO95155 1302 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 SIP14410 1827 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 LRRC10BA6NIK2 292 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 ASB14A6NK59 587 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 ESPNB1AK53 854 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 BACH1O14867 736 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 EIF3DO15371 548 aaKnown RBP eCLIP8.29□□□□□ -1.08
TPM1-231ENST00000561395 ATMINO43313 823 aaPredicted RBP8.29□□□□□ -1.08
TPM1-231ENST00000561395 ZNF862O60290 1169 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 DKC1O60832 514 aaKnown RBP eCLIP8.29□□□□□ -1.08
TPM1-231ENST00000561395 ATG7O95352 703 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 SUPT20HL2P0C7V6 817 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 ACRP10323 421 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 CSF2RAP15509 400 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 EEF1GP26641 437 aaKnown RBP8.29□□□□□ -1.08
TPM1-231ENST00000561395 YWHABP31946 246 aaKnown RBP8.29□□□□□ -1.08
TPM1-231ENST00000561395 RARRES1P49788 294 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 CLCN6P51797 869 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 COPB1P53618 953 aaKnown RBP8.29□□□□□ -1.08
TPM1-231ENST00000561395 MAPK7Q13164 816 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 NEDD9Q14511 834 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 NR1I3Q14994 352 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 BMT2Q1RMZ1 405 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 ZNF792Q3KQV3 632 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 PPP2R2DQ66LE6 453 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 MIS18BP1Q6P0N0 1132 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 PADI6Q6TGC4 694 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 ZNF365Q70YC5 407 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 CYFIP1Q7L576 1253 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 CCDC186Q7Z3E2 898 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 CCDC60Q8IWA6 550 aaPredicted RBP8.29□□□□□ -1.08
TPM1-231ENST00000561395 FAM114A1Q8IWE2 563 aa8.29□□□□□ -1.08
TPM1-231ENST00000561395 DAW1Q8N136 415 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms